prot_H-canaliculatus_F_contig13901.3104.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig13901.3104.1
Unique Nameprot_H-canaliculatus_F_contig13901.3104.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length64
Homology
BLAST of mRNA_H-canaliculatus_F_contig13901.3104.1 vs. uniprot
Match: A0A6H5KRX4_9PHAE (ANAPC4_WD40 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KRX4_9PHAE)

HSP 1 Score: 98.6 bits (244), Expect = 6.150e-23
Identity = 43/47 (91.49%), Postives = 46/47 (97.87%), Query Frame = 0
Query:    1 QVDTNPDPRPFGSVKPFGEAYHQFSCGGWVTAVAWSPSGSTLAYAGE 47
            +VDTNPDPRPFG+VKPFGEAYHQFSCGGWVTAVAWSPSGS LAYAG+
Sbjct:  186 EVDTNPDPRPFGTVKPFGEAYHQFSCGGWVTAVAWSPSGSILAYAGQ 232          
BLAST of mRNA_H-canaliculatus_F_contig13901.3104.1 vs. uniprot
Match: L8GH55_ACACA (Actin-related protein 2/3 complex subunit n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GH55_ACACA)

HSP 1 Score: 55.1 bits (131), Expect = 3.070e-7
Identity = 23/43 (53.49%), Postives = 29/43 (67.44%), Query Frame = 0
Query:    2 VDTNPDPRPFGSVKPFGEAYHQFSCGGWVTAVAWSPSGSTLAY 44
            VD  P+  PFG   PFGE   ++SCGGWV  V+WSPSG  L++
Sbjct:  182 VDKRPENTPFGDKLPFGEMLAEYSCGGWVHGVSWSPSGEWLSF 224          
BLAST of mRNA_H-canaliculatus_F_contig13901.3104.1 vs. uniprot
Match: A0A812V2M3_SYMMI (ARPC1A protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812V2M3_SYMMI)

HSP 1 Score: 53.1 bits (126), Expect = 4.190e-7
Identity = 27/49 (55.10%), Postives = 29/49 (59.18%), Query Frame = 0
Query:    2 VDTNPDPRPFGSVKPFGEAYHQFSCGGWVTAVAWSPSGSTLAYAGESRS 50
            VD  P    F     FGEAY +FS  GWVT VAWSPSG +L YAG   S
Sbjct:   42 VDAAPSQGNFEKPLEFGEAYCEFSSHGWVTGVAWSPSGESLCYAGHDSS 90          
BLAST of mRNA_H-canaliculatus_F_contig13901.3104.1 vs. uniprot
Match: A0A8K1FHC8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FHC8_PYTOL)

HSP 1 Score: 51.6 bits (122), Expect = 5.220e-6
Identity = 26/50 (52.00%), Postives = 32/50 (64.00%), Query Frame = 0
Query:    2 VDTNPDPRPFGSVKPFGEAYHQF-SCGGWVTAVAWSPSGSTLAYAGESRS 50
            VD  P+P PF  + PFGE   +F +   WV AVAWSPSG+ LA+AG   S
Sbjct:  186 VDGAPNPGPFPQLAPFGEPLAEFDNANAWVNAVAWSPSGNRLAFAGHGSS 235          
BLAST of mRNA_H-canaliculatus_F_contig13901.3104.1 vs. uniprot
Match: A0A6A5H4H5_CAERE (ANAPC4_WD40 domain-containing protein (Fragment) n=1 Tax=Caenorhabditis remanei TaxID=31234 RepID=A0A6A5H4H5_CAERE)

HSP 1 Score: 50.8 bits (120), Expect = 9.390e-6
Identity = 22/44 (50.00%), Postives = 29/44 (65.91%), Query Frame = 0
Query:    1 QVDTNPDPRPFGSVKPFGEAYHQFSCGGWVTAVAWSPSGSTLAY 44
            +VD  P P P+G   PFG+   ++S GGWV  VA+SPSG  LA+
Sbjct:  118 EVDEKPSPNPWGQKMPFGQLMSEYSVGGWVHRVAFSPSGCRLAF 161          
BLAST of mRNA_H-canaliculatus_F_contig13901.3104.1 vs. uniprot
Match: A0A2P4VA15_CAERE (Uncharacterized protein n=2 Tax=Caenorhabditis remanei TaxID=31234 RepID=A0A2P4VA15_CAERE)

HSP 1 Score: 50.8 bits (120), Expect = 1.010e-5
Identity = 22/44 (50.00%), Postives = 29/44 (65.91%), Query Frame = 0
Query:    1 QVDTNPDPRPFGSVKPFGEAYHQFSCGGWVTAVAWSPSGSTLAY 44
            +VD  P P P+G   PFG+   ++S GGWV  VA+SPSG  LA+
Sbjct:  182 EVDEKPSPNPWGQKMPFGQLMSEYSVGGWVHRVAFSPSGCRLAF 225          
BLAST of mRNA_H-canaliculatus_F_contig13901.3104.1 vs. uniprot
Match: A0A662WKQ5_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WKQ5_9STRA)

HSP 1 Score: 49.7 bits (117), Expect = 2.400e-5
Identity = 25/50 (50.00%), Postives = 31/50 (62.00%), Query Frame = 0
Query:    2 VDTNPDPRPFGSVKPFGEAYHQF-SCGGWVTAVAWSPSGSTLAYAGESRS 50
            VD  PD  PF ++ PFGE   +F +   WV AVAWSP G  LA+AG+  S
Sbjct:  160 VDGPPDAGPFEALPPFGEPVAEFDNASAWVNAVAWSPKGDRLAFAGQGSS 209          
BLAST of mRNA_H-canaliculatus_F_contig13901.3104.1 vs. uniprot
Match: A8XT67_CAEBR (Actin-related protein 2/3 complex subunit n=10 Tax=Caenorhabditis TaxID=6237 RepID=A8XT67_CAEBR)

HSP 1 Score: 49.7 bits (117), Expect = 2.500e-5
Identity = 21/44 (47.73%), Postives = 29/44 (65.91%), Query Frame = 0
Query:    1 QVDTNPDPRPFGSVKPFGEAYHQFSCGGWVTAVAWSPSGSTLAY 44
            +VD  P P P+G   PFG+   +++ GGWV  VA+SPSG  LA+
Sbjct:  182 EVDEKPSPNPWGQKMPFGQLMSEYTVGGWVHRVAFSPSGCRLAF 225          
BLAST of mRNA_H-canaliculatus_F_contig13901.3104.1 vs. uniprot
Match: D0P410_PHYIT (Actin-related protein 2/3 complex subunit n=25 Tax=Peronosporaceae TaxID=4777 RepID=D0P410_PHYIT)

HSP 1 Score: 49.7 bits (117), Expect = 2.500e-5
Identity = 24/50 (48.00%), Postives = 32/50 (64.00%), Query Frame = 0
Query:    2 VDTNPDPRPFGSVKPFGEAYHQF-SCGGWVTAVAWSPSGSTLAYAGESRS 50
            +D  PD  PF ++ PFGE   +F +   WV AVAWSP G+ LA+AG+  S
Sbjct:  185 IDGPPDAGPFEALPPFGEPLAEFDNASAWVNAVAWSPKGNRLAFAGQGSS 234          
BLAST of mRNA_H-canaliculatus_F_contig13901.3104.1 vs. uniprot
Match: A0A1I7XSB6_HETBA (Uncharacterized protein n=1 Tax=Heterorhabditis bacteriophora TaxID=37862 RepID=A0A1I7XSB6_HETBA)

HSP 1 Score: 48.5 bits (114), Expect = 3.430e-5
Identity = 21/44 (47.73%), Postives = 29/44 (65.91%), Query Frame = 0
Query:    1 QVDTNPDPRPFGSVKPFGEAYHQFSCGGWVTAVAWSPSGSTLAY 44
            +VD  P P P+GS  PFG+   ++S GGWV  V++SPSG  L +
Sbjct:   87 EVDEKPSPNPWGSKMPFGQLLGEYSAGGWVHNVSFSPSGCRLIW 130          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig13901.3104.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
A0A6H5KRX4_9PHAE6.150e-2391.49ANAPC4_WD40 domain-containing protein n=2 Tax=Ecto... [more]
L8GH55_ACACA3.070e-753.49Actin-related protein 2/3 complex subunit n=1 Tax=... [more]
A0A812V2M3_SYMMI4.190e-755.10ARPC1A protein n=1 Tax=Symbiodinium microadriaticu... [more]
A0A8K1FHC8_PYTOL5.220e-652.00Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A6A5H4H5_CAERE9.390e-650.00ANAPC4_WD40 domain-containing protein (Fragment) n... [more]
A0A2P4VA15_CAERE1.010e-550.00Uncharacterized protein n=2 Tax=Caenorhabditis rem... [more]
A0A662WKQ5_9STRA2.400e-550.00Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
A8XT67_CAEBR2.500e-547.73Actin-related protein 2/3 complex subunit n=10 Tax... [more]
D0P410_PHYIT2.500e-548.00Actin-related protein 2/3 complex subunit n=25 Tax... [more]
A0A1I7XSB6_HETBA3.430e-547.73Uncharacterized protein n=1 Tax=Heterorhabditis ba... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..63
e-value: 9.0E-13
score: 49.7
NoneNo IPR availableSUPERFAMILY82171DPP6 N-terminal domain-likecoord: 20..50

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig13901contigH-canaliculatus_F_contig13901:2457..2648 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig13901.3104.1mRNA_H-canaliculatus_F_contig13901.3104.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig13901 2457..2648 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig13901.3104.1 ID=prot_H-canaliculatus_F_contig13901.3104.1|Name=mRNA_H-canaliculatus_F_contig13901.3104.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=64bp
QVDTNPDPRPFGSVKPFGEAYHQFSCGGWVTAVAWSPSGSTLAYAGESRS
SPLSWREDGSCRHT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom_sf