mRNA_H-canaliculatus_F_contig1390.3101.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig1390.3101.1
Unique NamemRNA_H-canaliculatus_F_contig1390.3101.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1390.3101.1 vs. uniprot
Match: D8LGW6_ECTSI (Centrosomal protein POC5 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGW6_ECTSI)

HSP 1 Score: 311 bits (796), Expect = 4.020e-100
Identity = 178/220 (80.91%), Postives = 189/220 (85.91%), Query Frame = 3 
Query:   87 TANKALTGKAEVLGERLSALHARTSSGSCVARCLCAWRREAARVRTERSKNVTAGDHARRKLMSRSLNAWREEARLRIDSRGRKAADLKLHAISKEIVGRYEAELSRTRAALDDAMSQIALEKARQREMEEGMRRTLLRGMSAMNMEAMRLMTEASRDGGEEDFGVSGTTA--GTRYSTAETD-PSFVPRET-GSGHH-RLSEEWPRPLTPPRPAVPSSR 731
            +AN  L GKAEV GERLSALHART  GS +ARCLCAWR EAAR+R ERSKNVTAGDHARRKLMSR+L AWR E R RI+SRGRK ADLKLHAISKEI+GRYE ELS TRAALDDA+SQIALEKARQREMEEGMRRTLLRGMSAMNMEAMRLMTEA RD GE++FG+SGTTA  GTRYS   TD PSF  R   G+ HH RLSEEWPRPLTPPRPAVPSSR
Sbjct:    2 SANTVLEGKAEVFGERLSALHARTHGGSYLARCLCAWRGEAARIRAERSKNVTAGDHARRKLMSRTLGAWRGETRQRINSRGRKEADLKLHAISKEIIGRYETELSSTRAALDDAISQIALEKARQREMEEGMRRTLLRGMSAMNMEAMRLMTEA-RDAGEDEFGLSGTTATTGTRYSAGGTDAPSFGARAAAGAAHHSRLSEEWPRPLTPPRPAVPSSR 220
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1390.3101.1 vs. uniprot
Match: A0A7S4D5K4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D5K4_HETAK)

HSP 1 Score: 57.4 bits (137), Expect = 4.890e-6
Identity = 40/108 (37.04%), Postives = 67/108 (62.04%), Query Frame = 3 
Query:  285 LNAWR-EEARLRIDSRGRKAADLKLHAISKEIVGRYEAELSRTRAALDDAMSQIALEKARQREMEEGMRRTLLRGMSAMNMEAMRLMTE--------ASRDGGEEDFG 581
            L+ WR E A  R++++ +K  + KL  +++E++GRYEAEL R  A L  A   +  E+ R+R+MEE  R+ +L+G++AMN+ A+ L  +        A+  GG++D G
Sbjct:    6 LSQWRIETAERRLEAQKQKY-EAKLGRVTRELIGRYEAELRRMAADLGHARDLVRGEQRRRRQMEEEFRQAILKGITAMNVGAIGLFGDQRAPTQVAAAPAGGDDDSG 112
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1390.3101.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LGW6_ECTSI4.020e-10080.91Centrosomal protein POC5 n=2 Tax=Ectocarpus TaxID=... [more]
A0A7S4D5K4_HETAK4.890e-637.04Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1390contigH-canaliculatus_F_contig1390:18210..23926 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons7
Model size1667
Cds size462
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929135.042733-UTR-H-canaliculatus_F_contig1390:18209..191421622929135.042733-UTR-H-canaliculatus_F_contig1390:18209..19142Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1390 18210..19142 -
1696845690.7545912-UTR-H-canaliculatus_F_contig1390:18209..191421696845690.7545912-UTR-H-canaliculatus_F_contig1390:18209..19142Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1390 18210..19142 -
1622929135.1298182-UTR-H-canaliculatus_F_contig1390:22184..221941622929135.1298182-UTR-H-canaliculatus_F_contig1390:22184..22194Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1390 22185..22194 -
1696845690.8221374-UTR-H-canaliculatus_F_contig1390:22184..221941696845690.8221374-UTR-H-canaliculatus_F_contig1390:22184..22194Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1390 22185..22194 -
1622929135.1449835-UTR-H-canaliculatus_F_contig1390:22809..229831622929135.1449835-UTR-H-canaliculatus_F_contig1390:22809..22983Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1390 22810..22983 -
1696845690.8318799-UTR-H-canaliculatus_F_contig1390:22809..229831696845690.8318799-UTR-H-canaliculatus_F_contig1390:22809..22983Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1390 22810..22983 -
1622929135.160317-UTR-H-canaliculatus_F_contig1390:23838..239261622929135.160317-UTR-H-canaliculatus_F_contig1390:23838..23926Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1390 23839..23926 -
1696845690.8414521-UTR-H-canaliculatus_F_contig1390:23838..239261696845690.8414521-UTR-H-canaliculatus_F_contig1390:23838..23926Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1390 23839..23926 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929135.0564687-CDS-H-canaliculatus_F_contig1390:19142..192061622929135.0564687-CDS-H-canaliculatus_F_contig1390:19142..19206Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1390 19143..19206 -
1696845690.7635684-CDS-H-canaliculatus_F_contig1390:19142..192061696845690.7635684-CDS-H-canaliculatus_F_contig1390:19142..19206Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1390 19143..19206 -
1622929135.0681913-CDS-H-canaliculatus_F_contig1390:19649..197661622929135.0681913-CDS-H-canaliculatus_F_contig1390:19649..19766Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1390 19650..19766 -
1696845690.7732506-CDS-H-canaliculatus_F_contig1390:19649..197661696845690.7732506-CDS-H-canaliculatus_F_contig1390:19649..19766Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1390 19650..19766 -
1622929135.0809472-CDS-H-canaliculatus_F_contig1390:19997..201011622929135.0809472-CDS-H-canaliculatus_F_contig1390:19997..20101Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1390 19998..20101 -
1696845690.7823358-CDS-H-canaliculatus_F_contig1390:19997..201011696845690.7823358-CDS-H-canaliculatus_F_contig1390:19997..20101Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1390 19998..20101 -
1622929135.09394-CDS-H-canaliculatus_F_contig1390:21153..212211622929135.09394-CDS-H-canaliculatus_F_contig1390:21153..21221Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1390 21154..21221 -
1696845690.790832-CDS-H-canaliculatus_F_contig1390:21153..212211696845690.790832-CDS-H-canaliculatus_F_contig1390:21153..21221Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1390 21154..21221 -
1622929135.1151626-CDS-H-canaliculatus_F_contig1390:22075..221841622929135.1151626-CDS-H-canaliculatus_F_contig1390:22075..22184Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1390 22076..22184 -
1696845690.8015046-CDS-H-canaliculatus_F_contig1390:22075..221841696845690.8015046-CDS-H-canaliculatus_F_contig1390:22075..22184Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1390 22076..22184 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1390.3101.1prot_H-canaliculatus_F_contig1390.3101.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig1390 19143..22184 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig1390.3101.1

>prot_H-canaliculatus_F_contig1390.3101.1 ID=prot_H-canaliculatus_F_contig1390.3101.1|Name=mRNA_H-canaliculatus_F_contig1390.3101.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=154bp
MSRSLNAWREEARLRIDSRGRKAADLKLHAISKEIVGRYEAELSRTRAAL
DDAMSQIALEKARQREMEEGMRRTLLRGMSAMNMEAMRLMTEASRDGGEE
DFGVSGTTAGTRYSTAETDPSFVPRETGSGHHRLSEEWPRPLTPPRPAVP
SSR*
back to top

mRNA from alignment at H-canaliculatus_F_contig1390:18210..23926-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig1390.3101.1 ID=mRNA_H-canaliculatus_F_contig1390.3101.1|Name=mRNA_H-canaliculatus_F_contig1390.3101.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=5717bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1390:18210..23926- (Hapterophycus canaliculatus Oshoro5f female)
AGGCGCACAAGCGCCAGAGTGCCGAGGAGATCCTGCATCTCGAGGGCGAC
GGGAGGCGATTGCGGGCCGAGGTAGCGGAACTCCGGACGTGAGTTCGGCC
GATCGTGTGCCTGTGTGTTTGTGCTTCGCGATGCTCTTCACGCGGCATCT
ATTCGTCTTGCTTTGACGGCTGCACCAGCGCGTACTTGTAGGTGCTCCAA
GGGCGTGATGCACAAGGGCTGGATTTGGTGGTTTCGGGTGGTGGAAATCG
TTGTACCCGACGCCGGCTACGTCTACTGCAGCCGATGTCGAGTACGCGTC
GGCGTGTGTATGCGTTTCTGCGTGTGGTTTTGAAGGCGAGGTGTTCTCGG
TGTTGTCGCGTTTTGATGCGAGTAGACGTGACCTGCATTGACGCGATGAA
CCTGCCCTTAAGATCTCTGGAAGTATCACTTTGTGTGTATATGTGTCTAG
GTATGTGTGTGTGTGTGTGTGCTTGTCAGTTACATCCGCGAATGCTCAAT
TCCCGCCGGTATGGATTGGGTCGGCCTTCCAGGGCGGATTGTGCGAGGTG
CGGCACGGAACAAGGTCTTTGAGAGGGTCGCGTCACTCAGCTCCAGGAGA
AGCGAGCGAAAAAATGTCTAGGAATGTATCAGTCGACGTCTTGGCGATTG
GGGGCTCTCTCTTCCACGTGTGCATTGCTGGCGAGCGGTGCTCCGAGATA
AAAACGACGAACCTTGGTCTAGAGATGGCGATTCATCTCTGCGGCCGGTT
TTCATATGGTGTCTGCGCGTCCGCAGCCCAGACTGAGCAGGCCAGACCAA
AAAAGGAAGGGAACAAATGTGCCCGGCAAGTAAGTCTACGCCACTCCCGC
CTTATCTCCCAAGTCGCACTTGCAGCTCTCGTTGCTCTTATCGTCGTGCA
TGCAAATATTCACGCATTTGTTGGCGATACCTTGTCCTCTCAGCGCGAAC
AAGGCTCTTACCGGAAAGGCAGAGGTTCTCGGAGAACGGTTGTCGGCGCT
CCACGCCCGCACCTCTTCGGGCTCCTGCGTGGCCCGGTGCCTCTGCGCTT
GGCGTCGGGAAGCGGCTCGCGTGCGCACGGAACGTTCCAAGAACGTTACC
GCCGGAGATCACGCCAGGTACGGCCGTCGCCAACGTGGGGAGGAAGCGGG
TGGAGGGACAGAGGAGGGAGGAGGAAGGAGGGGGGTTGAGAGAGTGTGGA
GCGCGTGCACCGCGGGGTTGATGTTTTTTGTTTTTTCCTTCGACAGATTT
ACGTCGCATGTCGACGCGACTCGAACCTCTCTGCGACCTTGACCACTCTC
TCTTTCGATCGCGGGAGGAGGGAAGGGGAGGGGGGTAGAAAAGGCTCGGG
GAGCGATGTTAGGTACGTACACCGATAATTCTGTCATGTTCTGCTGTATC
CTGCGGCCGCTCGCTCTACTGCTGCTCGTGCCCGAACGGTCGGGGTCGCC
GATCGCGGTCGATATCATTCGTTGCTGAGACCATCACAAACACGGGGATA
AAAGTCCCGCTCCGTGGCTATCCCTGTACAAGGAAGGAGTATATTTCAAC
CTACCCACACATCATTTTCGTGCGCTGGTGCTCCAAGTTCCAAGGGCGAA
TGGGCTGCAGTTGCCGATGACCGAATCAGCCACATGGACGACGCAGGAGA
AAACTCCCATGCCCACCTCTCGTTCACGCTCCGCGACCCCATCCCTTGCC
CCGCACCGCTGCGGGGCCGCGCCTGCCTGCAGGCGAAAGCTGATGTCGCG
CAGCCTGAACGCCTGGCGAGAAGAAGCGCGGCTGCGCATCGACAGCAGGG
GCAGGAAGGCGGCGGATCTCAAGCTGCACGCGATCTCCAAGGAGATCGTC
GGTGAGTGCGGCCCCCGACCGGTCTCGACAGCTCGCCTCCCTCGTCGTCT
CGACTCCCCCGTTTTGAACCGCGTTTCCCGACGCGGGCCTAGAGGGTTTG
CCGCTTCAAGTTTCGACTGCGGCGTGCTCCGATTATGCGAGAGGGTTGGG
AAGGTAGGGAGGGTCGCTCATTCTTGGCCGTTCATCGCCCCAGCTCCAGT
GAGCTCGAAGCTCCCCTTTGATTTCTCCGTGTTTCTCGTAGACTGCACGC
CGCGCGCGCCTTGTTGTTGTGTTCGTCCTACCCCACGCAAGACTCCGGTT
GTACCCGGCGGGGTCTACGCTATCCCGAAACTGTGTCGTCCCCCGGAGAC
GTCGACGGCCATGTAGGGTCGCCCCCCGCTTGAGACATACCCCAGACGCG
TGCCCCCTCTCCTAGGATGGTGCGGATGGACCGGCGGACAGCCTTTCTGC
AGCCTCGACACAAGCGCACATTCGTGCCTGCGACCCTCCTTGCCTCTAGC
TGTTCCGCGGCAAGCAGTGCCCGTGCGCCAAAAGTAGACGAGGTCTCCAC
GGGGATGGATGCCTCCCGCCGAAGCTTTCGTCTTGCCTGGAGCGTATCAA
CGCTTGCGGGCCGACAAAAAGGCTCCAGGAGCGCTTTGGTCAATTCCTCT
GTCTCTGTGCCTTGTCTCCGCCCCTTTCTGTCTCTCTCTCTGCCTATCTC
TCGCTATGGCCATGTCTGTCTCTCACTCTGTCTCTCTCTCCTCTCTCTTC
CTCCTTCCCTCTCTCTCCTTCCCGTCCGTCCGCCGTTGGCCTTCTCGTTT
GGGAAAACCCTTCCCTGCGCGCGAACCGGGCGGCGGGCCGCCTTCCTGCC
CGCAGGCCGCTACGAGGCGGAGCTTTCGAGGACCCGCGCGGCACTTGACG
ACGCCATGAGCCAGATAGCCTTGGTGAGAACGCTTTGTTTGTTCGATCTG
CCTCCGTGGCTCCCGCCGCTTTTTTTTCACTGAGATGCTGTAGCGTGTAG
CACTGGTCGTGGAGAGGTCATGAACCAGAGCAAGAATTGCCTCACGAGTC
GACTGTTCCGTGACCCTTTCGTGTGTCCCATTGGGACAATTCCGAACAAG
AGGCTGCAAGCTGAGGCTTTTGGAGGCGAAGTTTTTGTGTGGACGTGGGG
TGTTTGTCCGGGTTGTGCCCGCATCCGATGGTTGTGATAATTCTTGGTGT
CGTACCCTACCGTCTCCGAAAGGTTGTGTGCGTTCGGAGAGCCCTCCCGC
GGGACACACGGAAGTTGGTCTACCTTTCAGAAACATCCGGATGCGGGTCC
AGGTCCGGATTCGGGTCCGGGTGCAGTATTGCATACCATCCCCGAAAGAT
GTAGGAGCTAGCTATTGAAGTCCTCACGAAACGTACCATGGACCCCCTGA
GAACGGGAAATATCCGGGCATACCCGCGGTATACTTGCACCTTCGGTACC
CGGCCCCATCACTGGTGTTCATTCCGTAGATGACGCCCTACCTTGCCTGC
TACAGAGGTATACCCTTTTCCCACACGTACGCCAAAAACCTAGGTACTGA
TAGGGATGCGTCAACAACTCGCAGCACTAAACCTTCCGATTCTGTACATC
CTGTGTAGAGCGCGATTCCCGTCCGAAGATTGTACGCGAACCCTGCAGAC
AACAACGTTGAAGTGGGCGCAGCAGTTTATCGCTCGTGTTTTGTCTTTGC
CCCGTCCGCCCAATGCACTCCCGTTTGTATGACGTCCGCTGTGGTCGTCA
AGCGAGAGTCCCACGTTGCTTCGTTCTCTCGAGGGTGGTAGAGCGTCGGA
GTGCTGACGGAGTTCATTCGCCTGGTACAGACAAAGCCTCACCGCACATG
TGGTTTTCACATCCGCCTGCACCAAGGCAGAAACGACAAGGTCTTTTTCT
TAAGGCTGTCGACGTTGATCTCACGAAACTGTCGCTCATTTTATGGCGAC
CGACCGGCTGCTGGGACATCGGCAGGAGAAAGCGCGTCAGAGAGAGATGG
AGGAGGGCATGCGCCGGACCCTTCTGCGCGGGATGTCGGCGATGAACATG
GAGGCGATGCGGCTCATGACCGAGGCTAGGTGAGAGAGGCTTAGGAAAAG
GCCTTTGCGCTTGGCACTTGTCCATAGGACTTTTTTCGACGCGGCGCAGC
ACGTAACGGTGCCATGCTGTCGAACCGCGTACCGTCTTTACCGCAGCCAA
CCGCAAAATAGCAACATCAACAGTCGCAACGTCAACAACGCTCGTCTCGT
CGTTTTTTCGGCCTTCACCCCTCGTCGGTACTCCCCGCGCCTACGTGTAC
CGCGACCGAGCAGAGACGGCGGAGAGGAGGACTTCGGCGTCAGCGGGACG
ACGGCGGGGACCAGGTACTCGACGGCCGAGACAGATCCCTCGTTCGTGCC
CCGTGAAACCGGTAGCGGGCATCACAGGTGAGGATAGGGCCAAGCGGGGT
TGATGTTTGTTTGGGCACCTTGGTGAGGGACGACCTGATGGCGCGTGCGT
GTGTTTGCAAGCGCACGGGGTGCTGGTTGACCGGTTTGTGGGAAGAGCTC
TTCGGCGGGAATGTGGAAAGAAAAAACAGGTGGCTGTTGGGTCGATGGTT
TGTGCTTGCCTTGAGGCGGTTGATGGTTGTTGGTTCCGATGTTTCCGAGC
TGGTGAGACTGTCTTCAACGACAACGTCTTCTGTTGGCAGCGCTCGAGCG
ATGCTTAGCGGGCAGCGCAGTAACGACGAGTTGCCGTTTTGTCCGCGCCG
CACTTTGGCAACATGGGGTGATATCGCGTCGCACACCATCCGATTGTCTC
TGTCGCGTTAAGTGTCGAAAGGACGGCATGTTCTTCGTGCCCCCCCCCGT
TCCCCACCTCCCCCTCGCAGATTGTCGGAGGAGTGGCCCCGACCTTTGAC
GCCCCCGAGACCGGCGGTGCCGTCCTCACGCTAGCCCCGGAACACACTCA
AGCAGCTTTCGCGCGGGAGGTTTGGGGAGGGGGGGGGAGGGGGGAGGATA
TCCTCTCGCATTGTCTGCGGCAGGAATGGTGGCGCCGTTGACCTCTGATC
TATGTCTTCTAAAGGCGCAGGAAGCCCAGCGTCGTGATTGCCTTACATAG
TCGGGAACGCTTGGGTTCGCCATCCCCCACTTCGTTTCGGGGGAGGGGGT
GGGGGATCAATGGAGGGACGGGATTGCCCATTTGGGGTTTCTTTTCGATG
TCCGACCGCCAGCCGAGTTTCGAACCGAGAATGGGGAAGAAGTGCCCGAC
CGGAAACCGTCCGCGGAACTCGGGGTAGTCAGGGAGTTGGTTCGGCGTGC
CCAGGGGAGTTCGATCAGCACCGCACGCATGCATTCGTCTTCAGGGCGAC
CATTGGTCCGTTTCCTATCCTCGCTGTAAAGACCGCTACGATTGCGAAGG
GGCACTCGGTGGTGGTGGGGATCGCGCATTTTGATGTGGTTTTGGGAGAA
GGGGTTCTTGTGGCCCCTGGACCAATCTGAACTGCTCTGGGCATGAGGGT
TTGGCAGGGCATAAGGGTGCCGGTTGAAACCGGCCAAGACGCCAGCAGAA
TACGCTGCTCGCCGCGGAGCTGATATCGGTGCCCATCACGCTTGAACACA
TCTCAGCTGGGCCCGAACCACCCTCTCTCCCAAATACAGTAGACACACAG
AGTTGCTGTTACCCATCTTAAGTCTTGTACCCCGCAGCGTTTTTCGGGGT
TATGTAGTCGCTTCTCGGTTTCGCTGGTGCAGCACTAGAGCTTCGACTGA
TTTCTCCGCAGTAAGATAGAAGAGAGAGGTGGATGTGTCAGTTTGGTTTG
CGAGAGATCTCTCGCCAAGATTCATGCTTGTGAAGGTGCGGCATCGAAGG
GACGGGAAAAGGCGCGG
back to top

Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1390:18210..23926-

>mRNA_H-canaliculatus_F_contig1390.3101.1 ID=mRNA_H-canaliculatus_F_contig1390.3101.1|Name=mRNA_H-canaliculatus_F_contig1390.3101.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=924bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1390:18210..23926- (Hapterophycus canaliculatus Oshoro5f female)
ATGTCGCGCAGCCTGAACGCCTGGCGAGAAGAAGCGCGGCTGCGCATCGA
CAGCAGGGGCAGGAAGGCGGCGGATCTCAAGCTGCACGCGATCTCCAAGG
AGATCGTCGATGTCGCGCAGCCTGAACGCCTGGCGAGAAGAAGCGCGGCT
GCGCATCGACAGCAGGGGCAGGAAGGCGGCGGATCTCAAGCTGCACGCGA
TCTCCAAGGAGATCGTCGGCCGCTACGAGGCGGAGCTTTCGAGGACCCGC
GCGGCACTTGACGACGCCATGAGCCAGATAGCCTTGGCCGCTACGAGGCG
GAGCTTTCGAGGACCCGCGCGGCACTTGACGACGCCATGAGCCAGATAGC
CTTGGAGAAAGCGCGTCAGAGAGAGATGGAGGAGGGCATGCGCCGGACCC
TTCTGCGCGGGATGTCGGCGATGAACATGGAGGCGATGCGGCTCATGACC
GAGGCTAGGAGAAAGCGCGTCAGAGAGAGATGGAGGAGGGCATGCGCCGG
ACCCTTCTGCGCGGGATGTCGGCGATGAACATGGAGGCGATGCGGCTCAT
GACCGAGGCTAGCAGAGACGGCGGAGAGGAGGACTTCGGCGTCAGCGGGA
CGACGGCGGGGACCAGGTACTCGACGGCCGAGACAGATCCCTCGTTCGTG
CCCCGTGAAACCGGTAGCGGGCATCACAGCAGAGACGGCGGAGAGGAGGA
CTTCGGCGTCAGCGGGACGACGGCGGGGACCAGGTACTCGACGGCCGAGA
CAGATCCCTCGTTCGTGCCCCGTGAAACCGGTAGCGGGCATCACAGATTG
TCGGAGGAGTGGCCCCGACCTTTGACGCCCCCGAGACCGGCGGTGCCGTC
CTCACGCTAGATTGTCGGAGGAGTGGCCCCGACCTTTGACGCCCCCGAGA
CCGGCGGTGCCGTCCTCACGCTAG
back to top