prot_H-canaliculatus_F_contig139.3093.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig139.3093.1
Unique Nameprot_H-canaliculatus_F_contig139.3093.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length362
Homology
BLAST of mRNA_H-canaliculatus_F_contig139.3093.1 vs. uniprot
Match: A0A6H5K3M3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3M3_9PHAE)

HSP 1 Score: 286 bits (733), Expect = 2.590e-90
Identity = 209/378 (55.29%), Postives = 246/378 (65.08%), Query Frame = 0
Query:    3 LEPHALLRINAHEEIFLPVEVRVEWLSKQAALRMRASAMVGSRISQLDDAIRARALLSIMQ-LPSTPATGSQTQAATSEQGAGSAG--AEDEKAGTTRQEGEGCVAVEGQ--------GRHHVRRGSSEPPLDARDLEVLARMAVAKIKVVLFQLASPEEKKERQQQGKDVFDVYEGLLTSEDLERAAKEGFPTLDVDTLLHPNHFRYRSLIAARHRYLLRKLAVLLDMDEGVDLLLARAADTEKLQ-DSLADVDLSLDDEEQEGRDADQSSSPPLEPDLLHSXXXXXXXXXXXXXXXXXXXXGAAVTAXXXXSAAGAVG----KSSSLKIASTLR-TSWEKDT-GSEDTTEGETDEETMTPH-AAH-RRDVSDVSPS 360
            L+  +LLRINAHEE FLPVEV+V WLS+QA++R RASAMVGSRISQLDDAIR RALLSI+Q   +T A+ ++ +   S  GA SA   A+D+           C A EG+        G+ HVR  S  PP D +DLEV ARMAVAKIKVVLFQLASP E +ER+QQGKDVFDVYEGLLTSE L +AAKEGFPTLDV TL+ P HFRYRSL+AARHRYLLRKL VLLDM++ VD LL +AADTEK+   SLADVDLS  ++  E   AD  +    E    HS                     +A+      + A AVG    K++   +A   R TSW+KD  G E TTEGETDEETM+P  A H RR V  VSPS
Sbjct:   86 LDSRSLLRINAHEEFFLPVEVKVGWLSRQASMRSRASAMVGSRISQLDDAIRVRALLSILQSFNATTASVARPETPPSGAGASSAAKIAQDD-----------CPASEGEEVSRSGPTGKGHVRTDSGPPP-DPQDLEVFARMAVAKIKVVLFQLASPAEVREREQQGKDVFDVYEGLLTSEALAKAAKEGFPTLDVGTLMLPAHFRYRSLVAARHRYLLRKLGVLLDMEDCVDSLLEKAADTEKMDPSSLADVDLSAGEDVHEEGAADARALS-QEGASNHSAA-------------------SALVLPSNAAPAAAVGGGTLKTAKKAVARLRRSTSWDKDEEGGEATTEGETDEETMSPPLAVHPRRLVQPVSPS 431          
BLAST of mRNA_H-canaliculatus_F_contig139.3093.1 vs. uniprot
Match: D8LJG2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJG2_ECTSI)

HSP 1 Score: 216 bits (549), Expect = 2.130e-64
Identity = 141/231 (61.04%), Postives = 162/231 (70.13%), Query Frame = 0
Query:   34 LRMRASAMVGSRISQLDDAIRARALLSIMQLPSTPATGSQTQAATSEQGAGSAG-------AEDEKAGTTRQEGEGCVAVEGQGRHHVRRGSSEPPLDARDLEVLARMAVAKIKVVLFQLASPEEKKERQQQGKDVFDVYEGLLTSEDLERAAKEGFPTLDVDTLLHPNHFRYRSLIAARHRYLLRKLAVLLDMDEGVDLLLARAADTEKLQ-DSLADVDLSL-DDEEQEG 255
            +R RASAMVGSRISQLDDAIR RALLSI+Q                               A++  + +  +EG G      +G+ HVR  S  PP D +DLEV ARMAVAKIKVVLFQLASP E +ER+QQGKDVFDVYEGLLTSE L +AAKEGFPTLDV+TL+ P HFRYRSL+AARHRYLLRKL VLLDM++GVD LL +AADTEK+   SLADVDLS  DD + EG
Sbjct:    1 MRSRASAMVGSRISQLDDAIRVRALLSILQSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXIAQESCSASGGEEGSGSRP---KGKRHVRTDSGPPP-DLQDLEVFARMAVAKIKVVLFQLASPVEVREREQQGKDVFDVYEGLLTSEALAKAAKEGFPTLDVETLMLPAHFRYRSLVAARHRYLLRKLGVLLDMEDGVDSLLEKAADTEKMDPSSLADVDLSAGDDVDDEG 227          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig139.3093.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K3M3_9PHAE2.590e-9055.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LJG2_ECTSI2.130e-6461.04Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 234..254

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig139contigH-canaliculatus_F_contig139:25675..30506 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig139.3093.1mRNA_H-canaliculatus_F_contig139.3093.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig139 25645..32847 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig139.3093.1 ID=prot_H-canaliculatus_F_contig139.3093.1|Name=mRNA_H-canaliculatus_F_contig139.3093.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=362bp
MELEPHALLRINAHEEIFLPVEVRVEWLSKQAALRMRASAMVGSRISQLD
DAIRARALLSIMQLPSTPATGSQTQAATSEQGAGSAGAEDEKAGTTRQEG
EGCVAVEGQGRHHVRRGSSEPPLDARDLEVLARMAVAKIKVVLFQLASPE
EKKERQQQGKDVFDVYEGLLTSEDLERAAKEGFPTLDVDTLLHPNHFRYR
SLIAARHRYLLRKLAVLLDMDEGVDLLLARAADTEKLQDSLADVDLSLDD
EEQEGRDADQSSSPPLEPDLLHSSSSSSSQSAAASALTSPSGSGAAVTAA
AVVSAAGAVGKSSSLKIASTLRTSWEKDTGSEDTTEGETDEETMTPHAAH
RRDVSDVSPSH*
back to top