mRNA_H-canaliculatus_F_contig1386.3064.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
|
Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig1386.3064.1 vs. uniprot
Match: D7FZ57_ECTSI (Plastid-lipid associated protein PAP / fibrillin family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ57_ECTSI) HSP 1 Score: 306 bits (784), Expect = 2.280e-100 Identity = 164/233 (70.39%), Postives = 187/233 (80.26%), Query Frame = 3
Query: 60 AMKCFCIFLSLSSHLSLLRGAFSFAPAHSHTRTTGA---LPTWHRDGSCS-SAGGHRHRQR-ALQASSSSNWFTQFWRNASNKNGDTLGSAKDKLKQRLLDTVLSTKRGITTTAEQRLEIDELIAGLEPFNPNAKSVTSGSLSARWILEWTTEREIIFLMEKGLPGKPSGPVQQDIDVDAGTLSNRMLFGDDALFEVASSIEPEDSGPRVNFEFEACKLTYGRFTLPLPPVGK 743
AMKCF L L L+LL+ SFAP T + + PTW R GSCS + R+RQ+ L A+SS+NWF QFW N +K G+TL +AK+KLKQRLLDTV TKRGI+T+ EQR +IDELIA +EPFNPNAKSVTS SLSARWILEWTTEREIIFLME+GLPGKPSGPV+QDIDVDA TLSNRM+FGDD+LFEVASSI+PEDSGPRVNFEFEACKL YG FT+PLPPVGK
Sbjct: 8 AMKCFGSLLVL---LALLQSVASFAPTPVRTSSRSSRHGCPTWQR-GSCSVDSSTRRYRQQQTLHATSSNNWFAQFWPNREDKTGETLEAAKNKLKQRLLDTVRDTKRGISTSEEQRKDIDELIAAIEPFNPNAKSVTSESLSARWILEWTTEREIIFLMERGLPGKPSGPVEQDIDVDARTLSNRMIFGDDSLFEVASSIDPEDSGPRVNFEFEACKLKYGGFTIPLPPVGK 236
BLAST of mRNA_H-canaliculatus_F_contig1386.3064.1 vs. uniprot
Match: A0A7S0M3X5_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0M3X5_9CRYP) HSP 1 Score: 100 bits (248), Expect = 1.090e-21 Identity = 56/126 (44.44%), Postives = 77/126 (61.11%), Query Frame = 3
Query: 327 LKQRLLDTVLSTKRGITT---TAEQRLEIDELIAGLEPFNPNAKSVTSGSLSARWILEWTTEREIIFLMEKGLPGKPSGPVQQDIDVDAGTLSNRMLFGDDALFEVASSIEPEDSGPRVNFEFEAC 695
LKQ LL+ ++RG+T +QR E ELI L NP + +S ++ RW + WTTE+EI+FL+EKG G+ V QDID AGTL+N ++F +D+ +V S+ PE SGPR F F AC
Sbjct: 34 LKQNLLNLCGKSQRGLTPFDPPTKQRFE--ELIEALVDQNPTPDAASSPLMTGRWEMRWTTEKEILFLVEKGFFGQKCLSVYQDIDSAAGTLANALVFENDSYLKVQSTFLPEPSGPRFAFRFSAC 157
BLAST of mRNA_H-canaliculatus_F_contig1386.3064.1 vs. uniprot
Match: A0A7S4FF28_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4FF28_9EUGL) HSP 1 Score: 95.5 bits (236), Expect = 7.780e-18 Identity = 56/147 (38.10%), Postives = 78/147 (53.06%), Query Frame = 3
Query: 303 TLGSAKDKLKQRLLDTVLSTKRGITTTAEQRLEIDELIAGLEPFNPNAKSVTSGSLSARWILEWTTEREIIFLMEKGLPGKPSGPVQQDIDVDAGTLSNRMLFGDDALFEVASSIEPEDSGPRVNFEFEACKLTYGRFTLPLPPVGK 743
T S +LK+ LL V + G T + E+ ++ L+P NP + S ++ RW L WTTE+E +F +EKGL G +QDIDV +G L N + F F+V+SS+ E R NF F +C G +PLPPVGK
Sbjct: 468 TAKSKAQQLKRDLLKKVAPLRCGAAMTKAEEAEVLAIVEELKPLNPTPATSASPLINGRWDLLWTTEKEQLFFVEKGLFGSGFVAAKQDIDVASGRLQNLIEFEKGDYFKVSSSLSSEPP-VRCNFVFGSCVCKRGPLEVPLPPVGK 613
BLAST of mRNA_H-canaliculatus_F_contig1386.3064.1 vs. uniprot
Match: A0A7S1NRP4_9EUGL (Hypothetical protein n=2 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1NRP4_9EUGL) HSP 1 Score: 95.1 bits (235), Expect = 1.080e-17 Identity = 54/139 (38.85%), Postives = 71/139 (51.08%), Query Frame = 3
Query: 327 LKQRLLDTVLSTKRGITTTAEQRLEIDELIAGLEPFNPNAKSVTSGSLSARWILEWTTEREIIFLMEKGLPGKPSGPVQQDIDVDAGTLSNRMLFGDDALFEVASSIEPEDSGPRVNFEFEACKLTYGRFTLPLPPVGK 743
LK L D V G + Q + ++ LE NP S L ARW L WTTE+E +F + KGL G +QDID D G L N ++F + F+V S++ PE R NF+F C G + +PLPPVGK
Sbjct: 508 LKAELYDLVAPLNYGADMSPAQCATVLAVVEQLEALNPVPDPAASALLDARWDLLWTTEKEQLFFVSKGLFGSKFLAAKQDIDKDGGRLQNMIVFENGDYFKVGSTLRPEPPA-RCNFQFSDCLCKKGTWRVPLPPVGK 645
BLAST of mRNA_H-canaliculatus_F_contig1386.3064.1 vs. uniprot
Match: A0A7S0L934_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0L934_9EUKA) HSP 1 Score: 88.6 bits (218), Expect = 7.250e-16 Identity = 56/159 (35.22%), Postives = 72/159 (45.28%), Query Frame = 3
Query: 306 LGSAKDKLKQRLLDTVLSTKRGITTTAEQRLEIDELIAGLEPFNPNAKSVTSGSLSARWILEWTTEREIIFLMEKGLPGKPSGPVQQDID----------VDAGT----LSNRMLFGDDALFEVASSIEPEDSGPRVNFEFEACKLTYGRFTLPLPPVG 740
L S + LK+RLLD + + G + ++QR ++ LI L NP + +S L W + WTTE E++FL +KGLP P Q I DA L NR+ F V SS EP G RV F F C PLPPVG
Sbjct: 202 LSSRRATLKKRLLDACIGQELGALSNSDQRTDVAALIDSLAELNPTQQPASSPLLLGEWEVLWTTETELLFLTQKGLPFLPGEGASQTIRYVSAAGGESATDASPPPLELINRVSFSRGDALTVTSSCEPTAGGGRVQFRFSGCSARLYGIEFPLPPVG 360
BLAST of mRNA_H-canaliculatus_F_contig1386.3064.1 vs. uniprot
Match: A0A7S0HLR2_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0HLR2_9CRYP) HSP 1 Score: 83.6 bits (205), Expect = 2.360e-14 Identity = 50/146 (34.25%), Postives = 82/146 (56.16%), Query Frame = 3
Query: 312 SAKDKLKQRLLDTVLSTKRGITTTA-EQRLEIDELIAGLEPFNPNAKSVTSGSLSARWILEWTTEREIIFLMEKGLPGKPSGPVQQDIDVDAGTLSNRMLFGDD-ALFEVASSIEPEDSGPRVNFEFEACKLTYGRFTLPLPPVGK 743
S K++LK+ L +G+ T E+ + +++ LE K S + RW + WTTE+EI+FL+EKGL G V Q+I+++ G+L+N + F + + +V SS P+ G + F+F+ C L + +LPLPPVG+
Sbjct: 75 SRKEELKEELRGICERAGKGLQTLPQEESARMKDIMDELEANFSVEKPAESPYMQGRWNMLWTTEKEILFLVEKGLFGLACTGVWQEINLEEGSLTNIIDFEEGKGMLKVGSSFMPD--GDKFTFKFQTCSLKWNSISLPLPPVGQ 218
BLAST of mRNA_H-canaliculatus_F_contig1386.3064.1 vs. uniprot
Match: A0A7S0JMC5_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0JMC5_9EUKA) HSP 1 Score: 79.0 bits (193), Expect = 1.920e-13 Identity = 53/147 (36.05%), Postives = 68/147 (46.26%), Query Frame = 3
Query: 327 LKQRLLDTVLSTKRGITTTAEQRLEIDELIAGLEPFNPNAKSVTSGSLSARWILEWTTEREIIFLMEKGLPGKPSGPVQQDI-----DVDAGT----LSNRMLFGDDALFEVASSIEPEDSGPRVNFEFEACKLTYGRFTLPLPPVG 740
LK++LL T + + G + +EQR I I L NP S L +W + WTTE E++ L+ KGLPG P Q I D DA L N + F + V S+ P SG RV F F +C PLPPVG
Sbjct: 45 LKKKLLATCANQELGAASDSEQRAAIASQIDELAAVNPTPSPAASSLLRGKWEVVWTTESELLLLVNKGLPGLPGEGASQIIRFAEADDDASQRPLELLNCVQFEGGSALTVTSTCVPS-SGERVRFRFSSCAACLYGLEFPLPPVG 190
BLAST of mRNA_H-canaliculatus_F_contig1386.3064.1 vs. uniprot
Match: A0A6U5HKD8_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A6U5HKD8_9STRA) HSP 1 Score: 74.3 bits (181), Expect = 1.550e-11 Identity = 54/163 (33.13%), Postives = 83/163 (50.92%), Query Frame = 3
Query: 267 QFWRNASNKNGDTLGSAKDKLKQRLLDTVLSTKRGITTTAEQRLEIDELIAGLEPFNPNAKSVTSGSLSARWILEWTTEREIIFLMEKGLPGKPSGPVQQDIDVDA--GTLSNRMLFGDDALFEVASSIEPEDS-GPRVNFEFEACKLTYGRF-TLPLPPVGK 743
+FW N D + A D ++RL + +LS R + T+ R E++++IA L +PNA + S L +W+LEWTTE+EI F ++ + S + D D + G L N + F F V S+ P D+ R +FEF L + + LPP+GK
Sbjct: 72 EFWSNVV-PFSDAVDEA-DASRKRLKNGLLSLVR-TSGTSTDRSEVEDIIADLAALSPNADAARSALLRKKWLLEWTTEKEINFFLDWNISDDVSQSISYDGDGETAKGRLVNDIAFRRGGSFGVIGSLSPNDNLRLRTDFEFTGATLDLADWGSYQLPPLGK 231
BLAST of mRNA_H-canaliculatus_F_contig1386.3064.1 vs. uniprot
Match: K8EB53_9CHLO (At4g00030-like protein n=1 Tax=Bathycoccus prasinos TaxID=41875 RepID=K8EB53_9CHLO) HSP 1 Score: 67.0 bits (162), Expect = 2.530e-9 Identity = 52/137 (37.96%), Postives = 68/137 (49.64%), Query Frame = 3
Query: 339 LLDTVLSTKRGITTTAEQRLE-IDELIAGLEPFNPNAKSVTSGSLSARWILEWTTEREIIFLMEKGLPGKPSGPVQQDIDVDAGTLSNRMLFGDDALFEVASSIEPEDSGPRVNFEFEACKLTYGR-FTLPLPPVGK 743
L+ S RGI +T + +E I + N K+ S+SARW L WT+ERE +FL+E + Q ID A TL N + F F V S IE D +VNF F + L + FTLP+PPVGK
Sbjct: 52 LISIASSDDRGIGSTRRREIESIIDRXXXXXXXXXNTKN-NDFSVSARWKLLWTSERETLFLLETF----QNSLAYQTIDEKAKTLRNAVEFSGGNAFVVESEIEILDER-KVNFTFLSAGLKFSNGFTLPVPPVGK 182
BLAST of mRNA_H-canaliculatus_F_contig1386.3064.1 vs. uniprot
Match: A0A8J5XKF4_DIALT (PAP_fibrillin domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XKF4_DIALT) HSP 1 Score: 68.2 bits (165), Expect = 5.570e-9 Identity = 36/108 (33.33%), Postives = 55/108 (50.93%), Query Frame = 3
Query: 417 AGLEPFNPNAKSVTSGSLSARWILEWTTEREIIFLMEKGLPGKPSGPVQQDIDVDAGTLSNRMLFGDDALFEVASSIEPEDSGPRVNFEFEACKLTYGRFTLPLPPVG 740
A ++ P+ ++ G RW LEWTTE+E++FL + GL G + QDI + G L +LF + V S+ + RV+F F++C + L LPP G
Sbjct: 66 AAIDRLGPSPRAPIDG----RWSLEWTTEKEVLFLRDNGLLGLECTGIFQDISLRTGRLEQLVLF-EGGFLRVGSTAAAQPGSERVDFRFDSCAARWRGIELALPPKG 168 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1386.3064.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1386.3064.1 >prot_H-canaliculatus_F_contig1386.3064.1 ID=prot_H-canaliculatus_F_contig1386.3064.1|Name=mRNA_H-canaliculatus_F_contig1386.3064.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=282bp MKCFCIFLSLSSHLSLLRGAFSFAPAHSHTRTTGALPTWHRDGSCSSAGGback to top mRNA from alignment at H-canaliculatus_F_contig1386:7089..13382- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig1386.3064.1 ID=mRNA_H-canaliculatus_F_contig1386.3064.1|Name=mRNA_H-canaliculatus_F_contig1386.3064.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=6294bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1386:7089..13382- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1386:7089..13382- >mRNA_H-canaliculatus_F_contig1386.3064.1 ID=mRNA_H-canaliculatus_F_contig1386.3064.1|Name=mRNA_H-canaliculatus_F_contig1386.3064.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1692bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1386:7089..13382- (Hapterophycus canaliculatus Oshoro5f female)back to top |