mRNA_H-canaliculatus_F_contig1385.3056.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig1385.3056.1 vs. uniprot
Match: A0A6H5JGU8_9PHAE (MEP1 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGU8_9PHAE) HSP 1 Score: 629 bits (1623), Expect = 4.630e-217 Identity = 300/459 (65.36%), Postives = 360/459 (78.43%), Query Frame = 3
Query: 336 AKGEGCFTMTHIYEFLGTKTDGSSKGPIYMLDGDGEVVKKPTGVTKKWLLAADMFVTGGGVFYCIGSELDGDCDEFRIQSTGPDDYHEVRGHGGSMYFSHTIVTSWDTPNNKPQEVYEDGRSFINCVSEKASEDTCDGATDDEMGECRMDLINSELGYLGWFDAESYGLTWKVR---------GFCKDLSNPDVFETTNVYGDIFNCDIHHNYYGHYTYGHQGGVWDNNKMHDNWQYGFDPHDDSDYLTISNNVVYGNVNHGIIASKRCNNVKIFGNNVSDGGPQASGIFLHRSSDDAEVYDNTITNM-HAGITLLESFGATIYDNKIDGVEYGVRLKVGSGDNEIFNNEINDCSIYALYTYLGADGPTEGISDGRPSGNAFRNNDISNTVTAVQLKTTDDMSITDNRFSGTEKLRFWDAQDTTWSGNSLPEDVCKTVIVSGNGGSVPESTFVSSAEVP 1682
A+ EGCFT+T +Y F GT+ DGSSKGP+YMLDG G + PT VTKKWLL A+++VT G +FYCIGSE GDCDE RIQSTGPDD++EVRGHGGSMYFSHT+VTSWDTPN +PQE YE GRSF+NCVSEK + +TCDG ++MGECRMD+INSE+GY+G+FD+ESYGLTWKVR GFCKDLSNPDVFETTNVYGDI N DIHH YYGHY+YGHQGGVW NN+MHDN QY ++NN VY N NHGIIASKRCNNVKI+ N VSDGGP A GIFLHRSSD+AEVY N I NM AGI LLESF A I+DN+IDGV++G+R+ +GSG N +++NE NDCS + LYTY+G+D P +S+GRP+GN F NN ++N+ V+ K +D++ +T+N F+GTE+L F+DAQ TTWSGNSLP VC I S +G SVP STF SS+ VP
Sbjct: 17 AESEGCFTLTDLYNFRGTENDGSSKGPLYMLDGSGSKITAPTSVTKKWLLEAELYVTNGAIFYCIGSEEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKQPQETYEGGRSFLNCVSEKLTGETCDGMAKNDMGECRMDIINSEMGYMGFFDSESYGLTWKVRRQAGRGVVRGFCKDLSNPDVFETTNVYGDIKNSDIHHMYYGHYSYGHQGGVWTNNEMHDNHQY------------VANNKVYNNYNHGIIASKRCNNVKIYDNQVSDGGPDAVGIFLHRSSDNAEVYGNKIWNMPDAGIALLESFNADIHDNEIDGVQFGIRMSLGSGGNSVYDNEFNDCSDWGLYTYMGSDEPD--VSNGRPNGNTFNNNKVTNSAGGVKFKNSDNIVVTNNEFTGTEELEFYDAQATTWSGNSLPSGVCIDNITSDDGNSVPPSTFSSSSGVP 461
BLAST of mRNA_H-canaliculatus_F_contig1385.3056.1 vs. uniprot
Match: D8LC73_ECTSI (Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC73_ECTSI) HSP 1 Score: 607 bits (1566), Expect = 2.390e-202 Identity = 284/438 (64.84%), Postives = 340/438 (77.63%), Query Frame = 3
Query: 285 RPEFSFDSSAGSTGRLYAKGEGCFTMTHIYEFLGTKTDGSSKGPIYMLDGDGEVVKKPTGVTKKWLLAADMFVTGGGVFYCIGSELDGDCDEFRIQSTGPDDYHEVRGHGGSMYFSHTIVTSWDTPNNKPQEVYEDGRSFINCVSEKASEDTCDGATDDEMGECRMDLINSELGYLGWFDAESYGLTWKVRGFCKDLSNPDVFETTNVYGDIFNCDIHHNYYGHYTYGHQGGVWDNNKMHDNWQYGFDPHDDSDYLTISNNVVYGNVNHGIIASKRCNNVKIFGNNVSDGGPQASGIFLHRSSDDAEVYDNTITNMH-AGITLLESFGATIYDNKIDGVEYGVRLKVGSGDNEIFNNEINDCSIYALYTYLGADGPTEGISDGRPSGNAFRNNDISNTVTAVQLKTTDDMSITDNRFSGTEKLRFWDAQDTTWSGNSL 1595
RP F + +S+G GRLYA+GEGCFTMT +Y F GT+ DGSSKGP+YMLD DG + P+G+T WLLAA++++TGGGVFYC G+ GDC++ RIQSTG DD+HEVRGHGGS+YF TIVTSWDTPN +PQE YE+GRSF+NCVSEK + D C+G +EMGECRMD+INSE+ YLG+FD+ESYG+TWKVRGFCKDLSNP+VFE TNVYGD+ DIHH YYGHY+YGHQGGVW NNKMHDNWQYGFDPHDDSDYLTI+ N VY NVNHGIIASKRCNNVKIF N V DGG A+GIFLHRSSD A V+DNTITNM AGI +LESF A IY N I+G +YG+R+ +GSG+NE++ N D S Y LYTY G+D P +SDGRPSGN N + + V++K DD N F + F ++ +T WSGN +
Sbjct: 427 RPSFRYAASSGVAGRLYAEGEGCFTMTDLYNFRGTENDGSSKGPVYMLDDDGTKLDIPSGITNNWLLAAELYITGGGVFYCKGTSAGGDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQETYENGRSFLNCVSEKLTGDDCEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKVRGFCKDLSNPEVFELTNVYGDLTGSDIHHLYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTIAYNEVYNNVNHGIIASKRCNNVKIFENEVRDGGAAAAGIFLHRSSDGAAVFDNTITNMQDAGIAMLESFDAQIYGNIINGAKYGIRMSLGSGNNEVYQNSFTDISQYGLYTYEGSDEPD--VSDGRPSGNVLALNLVEDCPIGVKIKEGDDNEFYQNTFINVDAFEFPESTNTMWSGNDI 862
BLAST of mRNA_H-canaliculatus_F_contig1385.3056.1 vs. uniprot
Match: D8LRM4_ECTSI (Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRM4_ECTSI) HSP 1 Score: 581 bits (1497), Expect = 3.800e-197 Identity = 296/559 (52.95%), Postives = 364/559 (65.12%), Query Frame = 3
Query: 3 NGLAGYEASDVCCPLSCGTCGGKGCSSRGDW-----CCTSDVKESGDMCSTTGSAPCIIAGGDTGPVSPVNPPSPVSTSTANPSPTPIMTIPTECTSSLRPEFSFDSSAGSTGRLYAKGEGCFTMTHIYEFLGTKTDGSSKGPIYMLDGDGEVVKKPTGVTKKWLLAADMFVTGGGVFYCIGSELDGDCDEFRIQSTGPDDYHEVRGHGGSMYFSHTIVTSWDTPNNKPQEVYEDGRSFINCVSEKASEDTCDGATDDEMGECRMDLINSELGYLGWFDAESYGLTWKVRGFCKDLSNPDVFETTNVYGDIFNCDIHHNYYGHYTYGHQGGVWDNNKMHDNWQYGFDPHDDSDYLTISNNVVYGNVNHGIIASKRCNNVKIFGNNVSDGGPQASGIFLHRSSDDAEVYDNTITNMH-AGITLLESFGATIYDNKIDGVEYGVRLKVGSGDNEIFNNEINDCSIYALYTYLGADGPTEGISDGRPSGNAFRNNDISNTVTAVQLKTTDDMSITDNRFSGTEKLRFWDAQDTTWSGNSLPEDVCKTVIVSGNGGSVPESTF 1661
NG G ++ ++CC + CGTCGG C RG CC + + ++G +CS SAPCI+ D G+T A+GEGCFT+T +Y F ++DGS+KGPI+ LD V P ++ KWLL A++ +TGG VFYC GS + GDCDE RIQSTGP D+HEVR HGGSMYF TIVTSWDTPN PQ Y GRSF+NCVSEK + + C G +EMGECRMD+INSE+GYLG+FD+ESYGLTWKVRGFCKDLSNPDVF+TTNVYG++ DIHHNYYG Y+YGHQGGVW NN+MHDN QYGFDPHDDSDYLT IIASKRCNNV+I+ N V DGGP A+GIFLHRSSD A V+DN + +M AG+ +LES A IY+N+ V++G+RL +GS +N + N D S LYTY G+D PT+G+SDGRPS N F NN I N V++K DD ITDN F+GT +L F+DAQ+T W GN+LP+ VC I S +G + STF
Sbjct: 14 NGFVGVQSENICCHVDCGTCGGSECRRRGKGLGAADCCRNYISKNGALCSENLSAPCIM----------------------------------------------DDVTGNTPD--AEGEGCFTITDLYNFR-LESDGSAKGPIFNLDDSYNTVLNPKVLSNKWLLTAELHITGGAVFYCRGSSIGGDCDELRIQSTGPTDFHEVRAHGGSMYFESTIVTSWDTPNKTPQATYVGGRSFLNCVSEKLTGEVCVGQAQNEMGECRMDIINSEIGYLGYFDSESYGLTWKVRGFCKDLSNPDVFDTTNVYGNLIGSDIHHNYYGQYSYGHQGGVWHNNQMHDNHQYGFDPHDDSDYLT------------SIIASKRCNNVQIYNNEVYDGGPFAAGIFLHRSSDYAIVHDNVVHDMQDAGMAMLESMNADIYNNRFSSVKFGIRLSLGSSENHVHENLFEDVSTQGLYTYQGSDEPTDGVSDGRPSDNLFENNRILNVTKGVKIKEGDDTVITDNVFTGTSELEFFDAQNTRWKGNTLPQGVCIKNIHSDDGIDIELSTF 511
BLAST of mRNA_H-canaliculatus_F_contig1385.3056.1 vs. uniprot
Match: D7FRR8_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR8_ECTSI) HSP 1 Score: 510 bits (1314), Expect = 9.300e-171 Identity = 251/452 (55.53%), Postives = 322/452 (71.24%), Query Frame = 3
Query: 342 GEGCFTMTHIYEFLGTKTDGSSKGPIYMLDGDGEVVKKPTGVTKKWLLAADMFVTGGGVFYCIGSELDGDCDEFRIQSTGPDDYHEVRGHGGSMYFSHTIVTSWDTPNNKPQEVYEDGRSFINCVSEKAS-EDTCDGATDDEMGECRMDLINSELGYLGWFDAESYGLTWKVRGFCKDLSNPDVFETTNVYGDIFNCDIHHNYYGHYTYGHQGGVWDNNKMHDNWQYGFDPHDDSDYLTISNNVVYGNVNHGIIASKRCNNVKIFGNNVSDGGPQASGIFLHRSSDDAEVYDNTITNM-HAGITLLESFGATIYDNKIDGVEYGVRLKVGSGDNEIFNNEINDCSIYALYTYLGADGPTEGISDGRPSGNAFRNNDISNTVTAVQLKTTDDMSITDNRFSGTEKLRFWDAQDTTWSGNSLPEDVCKTVIVSGNGGSVPESTFVSSAEVPPDC 1691
G GCFT++ +Y + G +G+SKGP+++LD + V + T T KWLL AD+FVTGG YC G + G+C E RI+ST D+ E+RGHGG++YF TIVTSWD KPQE Y+DGRSFI CVSE + EDTC + MGECRMD+I+SE+GYLG+ +E+YG+TWKVRGFC DLSNPDVF+ NVYGD+ DIHH YYG Y++GHQGGVW NN MHDN QYGFDPHDDSDYL I+ N VY NVNHGIIASKRCNNVKI+ N V DGG A+GIFLHRS DD+EVY NTITNM AGI +LE+ G I+DN++DG E+G+R+ +GS +N++ +N + ++TY+G+D P + GRP N F NN I T T V++K +D++SIT+N FSGT ++ F +A D WSGNS+P + C I + STF S+ +P +C
Sbjct: 8 GGGCFTLSDLYAWQGFYNNGNSKGPVFVLDSNDRVDETATTTTGKWLLTADLFVTGGATLYCRGKGVGGNCAELRIRSTSGSDFFEIRGHGGNLYFEDTIVTSWDVDGRKPQETYKDGRSFIRCVSEVLTGEDTC---AINNMGECRMDIIDSEMGYLGYDASEAYGITWKVRGFCSDLSNPDVFDDVNVYGDMKGSDIHHMYYGMYSFGHQGGVWTNNLMHDNHQYGFDPHDDSDYLIIAGNKVYNNVNHGIIASKRCNNVKIYDNEVYDGGADAAGIFLHRSGDDSEVYGNTITNMGDAGIAMLETSGCDIHDNQVDGGEFGIRVHLGSSNNKVHDNVFKNIWNVGMFTYVGSDEPW--VGGGRPCDNEFYNNTIQATETGVKIKESDNISITNNAFSGTTEIEFNNAIDIVWSGNSIPTNTCLEDIDNN-------STFTGSSGLPLEC 447
BLAST of mRNA_H-canaliculatus_F_contig1385.3056.1 vs. uniprot
Match: A0A6H5KWQ2_9PHAE (MEP2 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWQ2_9PHAE) HSP 1 Score: 489 bits (1260), Expect = 4.850e-164 Identity = 232/355 (65.35%), Postives = 271/355 (76.34%), Query Frame = 3
Query: 360 MTHIYEFLGTKTDGSSKGPIYMLDGDGEVVKKPTGVTKKWLLAADMFVTGGGVFYCIGSELDGDCDEFRIQSTGPDDYHEVRGHGGSMYFSHTIVTSWDTPNNKPQEVYEDGRSFINCVSEKASEDTCDGATDDEMGECRMDLINSELGYLGWFDAESYGLTWK--------VRGFCKDLSNPDVFETTNVYGDIFNCDIHHNYYGHYTYGHQGGVWDNNKMHDNWQYGFDPHDDSDYLTISNNVVYGNVNHGIIASKRCNNVKIFGNNVSDGGPQASGIFLHRSSDDAEVYDNTITNMH-AGITLLESFGATIYDNKIDGVEYGVRLKVGSGDNEIFNNEINDCSIYALYTYLG 1397
MT +Y F GT+ DGSSKGP+YMLD DG + P+G+T WLLAA++++TGGGVFYC G+ GDC++ RIQSTG DD+HEVRGHGGS+YF TIVTSWDTPN +PQE YE GRSF+NCVSEK + D C+G +EMGECRMD+INSE+ YLG+FD+ESYG+TWK VRGFCKDLSNP+VF+ TNVYGD+ DIHH YYGHY+YGHQGGVW NNKMHDNWQYGFDPHDDSDYLT IIASKRCNNVKIF N V DGG A GIFLHRSSDDA V+DNTITNM AGI LLE+F A IY N I+G +YG+R+ +GSG+N ++ N D S L LG
Sbjct: 1 MTDLYNFRGTEKDGSSKGPVYMLDDDGTKLDIPSGITNNWLLAAELYITGGGVFYCKGTSAGGDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQETYEGGRSFLNCVSEKLTGDDCEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKARLTRGFPVRGFCKDLSNPEVFDLTNVYGDLIGSDIHHLYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTR------------IIASKRCNNVKIFENEVRDGGAAAVGIFLHRSSDDAAVFDNTITNMQDAGIALLEAFDAQIYGNTINGAKYGIRMSLGSGNNVVYQNSFTDISQCKLRQRLG 343
BLAST of mRNA_H-canaliculatus_F_contig1385.3056.1 vs. uniprot
Match: D7FIU4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIU4_ECTSI) HSP 1 Score: 484 bits (1247), Expect = 6.680e-162 Identity = 243/420 (57.86%), Postives = 287/420 (68.33%), Query Frame = 3
Query: 423 MLDGDGEVVKKPTGVTKKWLLAADMFVTGGGVFYCIGSELDGDCDEFRIQSTGPDDYHEVRGHGGSMYFSHTIVTSWDTPNNKPQEVYEDGRSFINCVSEKASEDTCDGATDDEMGECRMDLINSELGYLGWFDAESYGLTWKVRGFCKDLSNPDVFETTNVYGDIFNCDIHHNYYGHYTYGHQGGVWDNNKMHDNWQYGFDPHDDSDYLTISNNVVYGNVNHGIIASKRCNNVKIFGNNVSDGGPQASGIFLHRSSDDAEVYDNTITNMHAGITLLESFGATIYDNKIDGVEYGVRLKVGSGDNEIFNNEINDCSIYALYTYLGADGPTEGISDGRPSGNAFRNNDISNTVTAVQLKTTDDMSITDNRFSGTEKLRFWDAQDTTWSGNSLPEDVCKTVIVSGNGGSVPESTFVSSAEVP 1682
MLD G + PT VTKKWLL ++++VT G +FYCIGSE GDCDE RIQSTGPDD++EVRGHGGSMYFSHT+VTSWDTPN KPQE YE GRSF+NCVSEK + +TCDG ++ GECRMD+INSE+GY+G+FDAESYGLTWKVRGFCKDLSNPDVFETTNVYGDI N +IHH YYG Y+YGHQGGVW NN+MHDN QYGFDPHDDSDYLTI+ ASKRCNNV+I+ N VSDGGP+A GIFLHRSSD+AEVY G D + +S+GRP+GN F NN I+NT V++K +D++ I++N F+GTE+L F+DAQ TTWS NSLP VC + S +G SVP STF SS+ VP
Sbjct: 1 MLDDSGNKITSPTSVTKKWLLESELYVTDGAIFYCIGSEEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKKPQETYEGGRSFLNCVSEKLTGETCDGKAKNDEGECRMDIINSEMGYMGFFDAESYGLTWKVRGFCKDLSNPDVFETTNVYGDIKNSNIHHMYYGMYSYGHQGGVWTNNEMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXASKRCNNVQIYNNEVSDGGPEAVGIFLHRSSDNAEVY-----------------GGXXXXXXXDAPD---------------------------------------VSNGRPNGNTFNNNKITNTAGGVKIKNSDNIVISNNDFTGTEELEFFDAQATTWSDNSLPSGVCIDNVTSDDGNSVPPSTFSSSSGVP 364
BLAST of mRNA_H-canaliculatus_F_contig1385.3056.1 vs. uniprot
Match: D7G8D9_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8D9_ECTSI) HSP 1 Score: 419 bits (1076), Expect = 1.430e-132 Identity = 237/468 (50.64%), Postives = 295/468 (63.03%), Query Frame = 3
Query: 225 TANPSPTPIMTIPTECTSSLRPEFSFDSSAGSTGRLYAKGEGCFTMTHIYEFLGTKTDGSSKGPIYMLDGDGEVVK-KPTGVTKKWLLAADMFVTGGGVFYCIGSELDGDCDEFRIQSTGPDDYHEVRGHGGSMYFSHTIVTSWDTPNNKPQEVYEDGRSFINCVSE--KASEDTCDGATDDEMGECRMDLINSELGYLGWFDAESYGLTWKVRGFCK---DLSNP---DVFETTNVYGDIFNCDIHHNYYGHYTYGHQGGVWDNNKMHDNWQYGFDPHDDSDYLTISNNVVYGNVNHGIIASKRCNNVKIFGNNVSDGGPQASGIFLHRSSDDAEVYDNTITNMH-AGITLLESFGATIYDNKIDGVEYGVRLKVGSGDNEIFNNEINDCSIYALYTYLGADGPTEGISDGRPSGNAFRNNDISNTVT--AVQLKTTDDMSITDNRFSGTEKLRFWDAQDTTWSGNS 1592
T + +PTP T T C S+ F+ D + Y +G GC T+T +YE GP+Y+LD + +VV PTG WLL ++ V G G+ GD D R+ ST DD+ EVRG+GG+++F T VTSWDT N + +E DGRSFINCV++ ++ CDG ++ E GECRMD+I+S +G +GWFDAESYGLTWKVRG C+ D P ++FE NVYGDI N +I+ YYGHY+YGHQGGVWD+N M DN QYGFDPHDDSD LTISNN+VYGN NHGIIASKRCNNVKIF N V DGG A GIFLHRSSD AEV+DN + NM AG+ ++ES+ A IYDN YG+RL +GSG N I NN + + Y LYTY+G+D P S+GRPS N F N I V +K D DN F+G F D+ DTTW N+
Sbjct: 165 TESTTPTPSAT--TSCDSAATVRFTDDIA-------YFEGGGCGTLTQMYEAQ------EGDGPLYVLDENNDVVGGTPTGY---WLLDRNLRVVDGSTLLVHGTAASGDADVLRLLSTS-DDFIEVRGYGGNLHFQSTTVTSWDTDNGQEREWDGDGRSFINCVTQFDDSAIWDCDGRSNQEWGECRMDIISSTMGNMGWFDAESYGLTWKVRGACEIDPDTGVPYNHEIFEDHNVYGDILNSEIYGMYYGHYSYGHQGGVWDSNIMRDNIQYGFDPHDDSDDLTISNNIVYGNGNHGIIASKRCNNVKIFNNEVYDGGEDAVGIFLHRSSDGAEVHDNVVYNMQDAGMAMMESYDANIYDNSFTNCRYGIRLSLGSGRNIITNNLFSGITQYGLYTYMGSDDPDVPNSNGRPSDNVFDGNTIETDGDNIGVHIKEGDSNVFIDNVFTGVSTYEFEDSSDTTWVDNT 613
BLAST of mRNA_H-canaliculatus_F_contig1385.3056.1 vs. uniprot
Match: A0A6H5JNF5_9PHAE (MEP13 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNF5_9PHAE) HSP 1 Score: 412 bits (1060), Expect = 1.210e-127 Identity = 219/437 (50.11%), Postives = 278/437 (63.62%), Query Frame = 3
Query: 324 GRLYAKGEGCFTMTHIYEFLGTKTDGSSKGPIYMLDGDGEVVK-KPTGVTKKWLLAADMFVTGGGVFYCIGSELDGDCDEFRIQSTGPDDYHEVRGHGGSMYFSHTIVTSWDTPNNKPQEVYEDGRSFINCVSEKASE--DTCDGATDDEMGECRMDLINSELGYLGWFDAESYGLTWKVRGFCKDLSNPDVFETTNVYGDIFNCDIHHNYYGHYTYGHQGGVWDNNKMHDNWQYGFDPHDDSDYLTISNNVVYGNVNHGIIASKRCNNVKIFGNNVSDGGPQASGIFLHRSSDDAEVYDNTITNMH-AGITLLESFGATIYDNKIDGVEYGVRLKVGSGDNEIFNNEINDCSIYALYTYLGADGPTEGIS-DGRPSGNAFRNNDISNTVTAVQLKTTDDMSITDNRF---SGTEKLRFWDAQDTTWSGNSLPEDVC 1610
G+ Y +G GC T+T IY G D GP+++LD + VV PTG WLL D+ V G + G + GD RIQSTG DY+E+RGHGGS+ F T VTSWDT K Y+ RSFI CVSE+ ++ DTCDG + MGECRMD+I SE+G +G+ AESYG++WKVRG+C + NP+VFE T V GDI + DI+ YYGHY++GH GG+W NKMHDN QYGFDPHDDSD L I+ N V+GN NHGIIASKRCNNVKI N V DGG A GIFLHRSSDD EV+ NT+ +M AG+ ++ES GA I+DN V+YG+RL VG+ N + NN +C Y +YTY G D P DG N F N + V+++ + + TDN F S E+ RF D +D W+ N +P+D+C
Sbjct: 398 GKNYIRGGGCATLTDIYTAQGGHNDD---GPLFVLDSNDNVVGGSPTGY---WLLMRDIHVEEGSLLQVHGPDAGGDARVLRIQSTGSRDYYEIRGHGGSLSFMDTKVTSWDTDEKKVNTNYKKERSFIRCVSEELADKPDTCDGHAVNHMGECRMDIIRSEMGEMGYDAAESYGISWKVRGYCSEDPNPEVFERTRVRGDIIDSDIYGMYYGHYSFGHDGGIWTGNKMHDNAQYGFDPHDDSDNLEIAYNTVWGNGNHGIIASKRCNNVKIHHNTVYDGGEGAVGIFLHRSSDDCEVWGNTVYDMKDAGMAIMESMGAHIHDNTFTNVKYGIRLSVGAARNIVENNSFLECDQYGIYTYQGNDKPEASKDWDGLLVDNTFHANTVEG---GVKIQKAEGIVFTDNNFYEHSSGEEYRFEDCEDVVWTNNRVPDDIC 825
BLAST of mRNA_H-canaliculatus_F_contig1385.3056.1 vs. uniprot
Match: D7FWE8_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWE8_ECTSI) HSP 1 Score: 393 bits (1009), Expect = 3.580e-120 Identity = 236/569 (41.48%), Postives = 300/569 (52.72%), Query Frame = 3
Query: 15 GYEASDVCCPLSCGTCGGKGCSSR-----GDWCCTSDVKESGDMCSTTGSAPCIIAGGDTGPVSPVNPPSPVSTSTANPSPTPIMTIPTECTSSLRPEFSFDSSAGSTGRLYAKGEGCFTMTHIYEFLGTKTDGSSKGPIYMLDGDGEVVK------KPTGVTKKWLLAADMFVTGGGVFYCIGSELDGDCDEFRIQSTGPDDYHEVRGHGGSMYFSHTIVTSWDTPNNKPQEVYEDGRSFINCVSEKASED--TCDGATDDEMGECRMDLINSELGYLGWFDAESYGLTWKVRGFCKDLSNPDVFETTNVYGDIFNCDIHHNYYGHYTYGHQGGVWDNNKMHDNWQYGFDPHDDSDYLTISNNVVYGNVNHGIIASKRCNNVKIFGNNVSDGGPQASGIFLHRSSDDAEVYDNTITNMHAGITLLESFGATIYDNKIDGVEYGVRLKVGSGDNEIFNNEINDCSIYALYTYLGADGPTEGISDGRPSGNAFRNNDISNTVTAVQLKTTDDMSITDNRFSGTEKLRFWDAQDTTWSGNSLPEDVCKTVIVSGNGGSVPESTFVSSAEVP 1682
G D CC CG CGG G CCTSD+ ++CS TG+APCI+ G TGP P+P + S + S+ G GC T+T +Y S GP+Y+LD +V PTG WLL + + + G Y G+ GD D RIQST DD+ E+RG GGS+ F T VTSWDT + + YE GRSFINCV++ D +C G ++ E GECRMD+I+S +G +GWFDAESYGLTWKVRG C DLSN ++ + NVYGDI +I+ YYG Y+YGHQGGVW +N M DN YGFDPHDDSD LTI+ N VYGN NHGIIASKRCNNV+I+ L+ESF A IYDN I+ +YG+RL +GS DN+I +N + S Y LYTY G+D P +DGR N+F N ISNT A+++K DD S T+N F + F D+ DT W+ N + GG + EST +S +P
Sbjct: 316 GVLKGDYCCSAGCGECGGXXXXXXXXGLTGADCCTSDIS---NLCSVTGAAPCIVDGDSTGPT---------------PTPXXXXXXXXXXXXXXXXXGTIASISTSSDSSSFSGGGCATLTDMYNTQ------SGSGPLYVLDSSNNIVSGGGGSASPTGY---WLLTSSLEILDGVTLYVHGTSAGGDADVLRIQSTD-DDFWEIRGWGGSLSFLETTVTSWDTDKGEERTEYEGGRSFINCVTQFDDSDIWSCSGRSNKERGECRMDIIDSTMGNMGWFDAESYGLTWKVRGLCSDLSNVEIMDDHNVYGDIKGSEIYGMYYGMYSYGHQGGVWTDNVMRDNILYGFDPHDDSDDLTIAGNTVYGNGNHGIIASKRCNNVEIYXXXXXXXXXXXXXXXXXXXXX-XXXXXXXXXXXXXXXALMESFRAEIYDNTIENCKYGIRLSLGSADNDIHDNTFDSSSTYGLYTYKGSDDPDVSGNDGRVKDNSFDANTISNTDVAMKIKEGDDNSFTNNVFENVKTFEFEDSTDTVWTNNDI------------GGGCLDESTDFASGSIP 843
BLAST of mRNA_H-canaliculatus_F_contig1385.3056.1 vs. uniprot
Match: D7FXE4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE4_ECTSI) HSP 1 Score: 370 bits (950), Expect = 1.670e-115 Identity = 211/441 (47.85%), Postives = 272/441 (61.68%), Query Frame = 3
Query: 312 AGSTGRLY---AKGE---GCFTMTHIYEFLGTKTDGSSKGPIYMLDGD-GEVVKKPTGVTKKWLLAADMFVTGGGVFYCIGSELDGDCDEFRIQSTGPDDYHEVRGHGGSMYFSHTIVTSWDTPNNKPQEVYEDGRSFINCVSEKASED--TCDGATDDEMGECRMDLINSELGYLGWFDAESYGLTWKVRGFCKDLSNPDVFETTNVYGDIFNCDIHHNYYGHYTYGHQGGVWDNNKMHDNWQYGFDPHDDSDYLTISNNVVYGNVNHGIIASKRCNNVKIFGNNVSDGGPQASGIFLHRSSDDAEVYDNTI-TNMHAGITLLESFGATIYDNKIDGVEYGVRLKVGSGDNEIFNNEINDCSIYALYTYLGADGPTEGISDGRPSGNAFRNNDISNTVTAVQLKTTDDMSITDNRFSGTEK----LRFWDAQDTTWSGNS 1592
AG+T RLY A GE GC T+ I+E + K P+Y +D D G+V + TG WLL +++V G G++ GD DE R+ ST + Y +R HGGS+ F T V SWDT N P E DGRS+I+ VSE +++ TC+G + MGE RMD+ NSE+GYLG+ D+ESYGLTWKVRGFCKD SNP++F+ NVYG++++ DIHH +G YTYGHQ G W NKMHDN YGFDPHDDSD+LTI +N VY N HGIIASKRCN V I GN V G ++GIFLHRSSDDA V N + N AG+ +LESF A + +N + +YGVR+ VG DN N I++ S Y YTYLG+D P + +S GR N F N S +++K D DN F + +RF DA ++ GN+
Sbjct: 54 AGTTKRLYLESADGETRGGCATLGQIWE------SRAGKAPLYAVDPDSGDVSETETGT---WLLTEELYVEDGITLKVYGTDEGGDADELRLLSTS-ETYINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAVSEIVTDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRMSVGCADNVFSENIISNNSKYNAYTYLGSDEP-DVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDDAMNSVMQGNT 483 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1385.3056.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1385.3056.1 >prot_H-canaliculatus_F_contig1385.3056.1 ID=prot_H-canaliculatus_F_contig1385.3056.1|Name=mRNA_H-canaliculatus_F_contig1385.3056.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=522bp MCSTTGSAPCIIAGGDTGPVSPVNPPSPVSTSTANPSPTPIMTIPTECTSback to top mRNA from alignment at H-canaliculatus_F_contig1385:17700..25717- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig1385.3056.1 ID=mRNA_H-canaliculatus_F_contig1385.3056.1|Name=mRNA_H-canaliculatus_F_contig1385.3056.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=8018bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1385:17700..25717- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1385:17700..25717- >mRNA_H-canaliculatus_F_contig1385.3056.1 ID=mRNA_H-canaliculatus_F_contig1385.3056.1|Name=mRNA_H-canaliculatus_F_contig1385.3056.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=3132bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1385:17700..25717- (Hapterophycus canaliculatus Oshoro5f female)back to top |