mRNA_H-canaliculatus_F_contig13847.3053.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig13847.3053.1 vs. uniprot
Match: A0A6H5KXN7_9PHAE (Transmembrane 9 superfamily member n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXN7_9PHAE) HSP 1 Score: 197 bits (501), Expect = 3.720e-58 Identity = 96/103 (93.20%), Postives = 100/103 (97.09%), Query Frame = 1
Query: 1 GPDAGLGEDSGWKQVHGDVFRAPKHLMVFSALFGTGCQLTVLVLVVILFAIAGPLHGDVYEERGEMVSTFIVCYALTSFVSGYTSGSYYRQFFTTPRAEQSSQ 309
GPDAG+GEDSGWKQVHGDVFRAPKHLM+FSALFGTGCQL VLVL+VILFAIAGPLHGDVYEERGEMV+TFIVCYALTS VSGY SGSYYRQFFTTPRAEQSSQ
Sbjct: 273 GPDAGVGEDSGWKQVHGDVFRAPKHLMLFSALFGTGCQLAVLVLLVILFAIAGPLHGDVYEERGEMVTTFIVCYALTSLVSGYMSGSYYRQFFTTPRAEQSSQ 375
BLAST of mRNA_H-canaliculatus_F_contig13847.3053.1 vs. uniprot
Match: D8LEY0_ECTSI (Transmembrane 9 superfamily member n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEY0_ECTSI) HSP 1 Score: 157 bits (398), Expect = 6.130e-45 Identity = 74/82 (90.24%), Postives = 80/82 (97.56%), Query Frame = 1
Query: 1 GPDAGLGEDSGWKQVHGDVFRAPKHLMVFSALFGTGCQLTVLVLVVILFAIAGPLHGDVYEERGEMVSTFIVCYALTSFVSG 246
GPDAG+GEDSGWKQVHGDVFRAPKHLM+FSALFGTGCQL VLVL+VILFAIAGPLHGDVYEERGEMV+TFIVCYALT+ +SG
Sbjct: 273 GPDAGIGEDSGWKQVHGDVFRAPKHLMLFSALFGTGCQLAVLVLLVILFAIAGPLHGDVYEERGEMVTTFIVCYALTTLISG 354
BLAST of mRNA_H-canaliculatus_F_contig13847.3053.1 vs. uniprot
Match: W7TF26_9STRA (Transmembrane 9 superfamily member n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TF26_9STRA) HSP 1 Score: 159 bits (402), Expect = 7.030e-44 Identity = 77/103 (74.76%), Postives = 88/103 (85.44%), Query Frame = 1
Query: 1 GPDAGLGEDSGWKQVHGDVFRAPKHLMVFSALFGTGCQLTVLVLVVILFAIAGPLHGDVYEERGEMVSTFIVCYALTSFVSGYTSGSYYRQFFTTPRAEQSSQ 309
G + G+ E+SGWKQVHGDVFRAP HLM FSAL+G GCQ LVLVV+ +AIAGPLHGDVYEERGE+V++ IV YALT V+GYTSGSYYRQFF TPR+EQSSQ
Sbjct: 264 GSEHGISEESGWKQVHGDVFRAPLHLMFFSALYGIGCQFLALVLVVVGWAIAGPLHGDVYEERGELVTSVIVAYALTCLVAGYTSGSYYRQFFPTPRSEQSSQ 366
BLAST of mRNA_H-canaliculatus_F_contig13847.3053.1 vs. uniprot
Match: A0A835YQT7_9STRA (Transmembrane 9 superfamily member n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQT7_9STRA) HSP 1 Score: 150 bits (380), Expect = 9.580e-41 Identity = 72/96 (75.00%), Postives = 85/96 (88.54%), Query Frame = 1
Query: 22 EDSGWKQVHGDVFRAPKHLMVFSALFGTGCQLTVLVLVVILFAIAGPLHGDVYEERGEMVSTFIVCYALTSFVSGYTSGSYYRQFFTTPRAEQSSQ 309
++SGWKQVHGDVFRAP HLM+F+AL+GTG Q+ LV V+LFA+AGPLHGDVYEERGEMV+T IV YALT+ V+GY SGSYYRQ+FTTPRAE +SQ
Sbjct: 270 QESGWKQVHGDVFRAPAHLMLFAALYGTGWQIATLVAGVVLFAMAGPLHGDVYEERGEMVTTVIVVYALTAAVAGYGSGSYYRQYFTTPRAEAASQ 365
BLAST of mRNA_H-canaliculatus_F_contig13847.3053.1 vs. uniprot
Match: A0A7S4DBZ3_HETAK (Transmembrane 9 superfamily member n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DBZ3_HETAK) HSP 1 Score: 141 bits (356), Expect = 4.210e-38 Identity = 66/98 (67.35%), Postives = 81/98 (82.65%), Query Frame = 1
Query: 16 LGEDSGWKQVHGDVFRAPKHLMVFSALFGTGCQLTVLVLVVILFAIAGPLHGDVYEERGEMVSTFIVCYALTSFVSGYTSGSYYRQFFTTPRAEQSSQ 309
+GEDSGWKQVHGDVFRAP+HL +F+AL GTG QL L +LFA+AGPLHGDVYEERGEM++ IV YAL++ V+GY SG+YY+Q F TP+AE+ SQ
Sbjct: 117 MGEDSGWKQVHGDVFRAPRHLALFAALVGTGWQLAALAAGAVLFALAGPLHGDVYEERGEMMTACIVMYALSTVVAGYASGAYYKQHFATPKAERGSQ 214
BLAST of mRNA_H-canaliculatus_F_contig13847.3053.1 vs. uniprot
Match: A0A7S3M626_9STRA (Transmembrane 9 superfamily member (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M626_9STRA) HSP 1 Score: 136 bits (342), Expect = 4.900e-37 Identity = 63/99 (63.64%), Postives = 86/99 (86.87%), Query Frame = 1
Query: 16 LGEDSGWKQVHGDVFRAPKHLMVFSALFGTGCQLTVLVLVVILFAIAGP-LHGDVYEERGEMVSTFIVCYALTSFVSGYTSGSYYRQFFTTPRAEQSSQ 309
+GED+GWKQVHGDVFR P++L +F A+ GTG QL +LVL VIL+A+ GP LHG++YE+RGEM+STFI+C++L+S ++GY+SGSYYR+FF T R+E +SQ
Sbjct: 223 IGEDTGWKQVHGDVFRPPENLELFCAIVGTGWQLVILVLFVILYAMLGPYLHGNMYEDRGEMISTFIICFSLSSAIAGYSSGSYYRRFFPTARSELNSQ 321
BLAST of mRNA_H-canaliculatus_F_contig13847.3053.1 vs. uniprot
Match: A0A7R9U3Y7_9STRA (Transmembrane 9 superfamily member n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U3Y7_9STRA) HSP 1 Score: 133 bits (334), Expect = 9.290e-35 Identity = 62/97 (63.92%), Postives = 76/97 (78.35%), Query Frame = 1
Query: 7 DAGLGEDSGWKQVHGDVFRAPKHLMVFSALFGTGCQLTVLVLVVILFAIAGPLHGDVYEERGEMVSTFIVCYALTSFVSGYTSGSYYRQFFTTPRAE 297
+ GLG++SGWKQ+HGDVFR P HLM+FSAL+GTG QL VL VIL+A G HG+VYEERGE+ + + Y+LTS V+GY SGSYYRQ+F TPR E
Sbjct: 136 EPGLGDESGWKQLHGDVFREPPHLMLFSALYGTGWQLAVLAFGVILYAALGRFHGEVYEERGEVTQSVLSIYSLTSVVAGYASGSYYRQYFNTPRRE 232
BLAST of mRNA_H-canaliculatus_F_contig13847.3053.1 vs. uniprot
Match: A0A6U4JKR6_9STRA (Transmembrane 9 superfamily member n=6 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4JKR6_9STRA) HSP 1 Score: 131 bits (329), Expect = 1.810e-33 Identity = 62/97 (63.92%), Postives = 75/97 (77.32%), Query Frame = 1
Query: 7 DAGLGEDSGWKQVHGDVFRAPKHLMVFSALFGTGCQLTVLVLVVILFAIAGPLHGDVYEERGEMVSTFIVCYALTSFVSGYTSGSYYRQFFTTPRAE 297
+ GL ++SGWKQ+HGDVFR P LM+++AL+GTG QL VL VILFA G HG+VYEERGEM + + YALTS V+GY+SGSYYRQFF TPR E
Sbjct: 289 EPGLSDESGWKQLHGDVFREPPSLMLYAALYGTGWQLAVLAFGVILFASLGRFHGEVYEERGEMTQSLLATYALTSVVAGYSSGSYYRQFFNTPRRE 385
BLAST of mRNA_H-canaliculatus_F_contig13847.3053.1 vs. uniprot
Match: A0A7R9W337_9STRA (Transmembrane 9 superfamily member (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W337_9STRA) HSP 1 Score: 120 bits (301), Expect = 1.530e-32 Identity = 58/94 (61.70%), Postives = 73/94 (77.66%), Query Frame = 1
Query: 22 EDSGWKQVHGDVFRAPKHLMVFSALFGTGCQLTVLVLVVILFAIAGPLHGDVYEERGEMVSTFIVCYALTSFVSGYTSGSYYRQFFTTPRAEQS 303
E+SGWKQVHGDVFRAP HL +F+AL GTG QL VL L VILFA+AGP+HG+V+EERGE++ + YAL+S VSGY SG Y++ + T A+ S
Sbjct: 75 EESGWKQVHGDVFRAPSHLPLFAALIGTGWQLVVLTLGVILFAVAGPIHGEVHEERGEILHAVVWIYALSSVVSGYASGKYFKLYSATSGAKGS 168
BLAST of mRNA_H-canaliculatus_F_contig13847.3053.1 vs. uniprot
Match: A0A6U5J731_9STRA (Transmembrane 9 superfamily member n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A6U5J731_9STRA) HSP 1 Score: 122 bits (305), Expect = 2.970e-31 Identity = 57/90 (63.33%), Postives = 73/90 (81.11%), Query Frame = 1
Query: 7 DAGLGEDSGWKQVHGDVFRAPKHLMVFSALFGTGCQLTVLVLVVILFAIAGPLHGDVYEERGEMVSTFIVCYALTSFVSGYTSGSYYRQF 276
+A L EDSGWKQVHGDVFR+P L +FSAL G+G QL ++L VILFA+AGP+HGDVYEERGE++S IV Y L+S +GY SG++YR++
Sbjct: 30 NAALNEDSGWKQVHGDVFRSPPFLELFSALVGSGWQLFFIMLTVILFAVAGPIHGDVYEERGEVISATIVVYVLSSITAGYYSGAFYRKY 119 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig13847.3053.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig13847.3053.1 >prot_H-canaliculatus_F_contig13847.3053.1 ID=prot_H-canaliculatus_F_contig13847.3053.1|Name=mRNA_H-canaliculatus_F_contig13847.3053.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=103bp GPDAGLGEDSGWKQVHGDVFRAPKHLMVFSALFGTGCQLTVLVLVVILFAback to top mRNA from alignment at H-canaliculatus_F_contig13847:695..2633+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig13847.3053.1 ID=mRNA_H-canaliculatus_F_contig13847.3053.1|Name=mRNA_H-canaliculatus_F_contig13847.3053.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=1939bp|location=Sequence derived from alignment at H-canaliculatus_F_contig13847:695..2633+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig13847:695..2633+ >mRNA_H-canaliculatus_F_contig13847.3053.1 ID=mRNA_H-canaliculatus_F_contig13847.3053.1|Name=mRNA_H-canaliculatus_F_contig13847.3053.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=618bp|location=Sequence derived from alignment at H-canaliculatus_F_contig13847:695..2633+ (Hapterophycus canaliculatus Oshoro5f female)back to top |