prot_H-canaliculatus_F_contig13844.3050.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig13844.3050.1
Unique Nameprot_H-canaliculatus_F_contig13844.3050.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length247
Homology
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BLAST of mRNA_H-canaliculatus_F_contig13844.3050.1 vs. uniprot
Match: D8LKU2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKU2_ECTSI)

HSP 1 Score: 78.6 bits (192), Expect = 5.840e-13
Identity = 60/123 (48.78%), Postives = 65/123 (52.85%), Query Frame = 0 
Query:   12 RVWVFHNFLAERGFRRQSLTGLSVWVANSTLSLLASTGPPAHELDGVAGGGFVDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLLLGDEPDGGNEFPPITHATL 134
            RVWV HNFLA RG RR SL GLSVW+ANST SLL +  PP  E +      +  G    XXXXXXXXX                                 LLLLGD PDGGN+FPPITHATL
Sbjct:  511 RVWVLHNFLAVRGLRRLSLNGLSVWLANSTSSLLGN--PPEGEYEYR----YYYGARADXXXXXXXXXLLFRFHRAFDGFSGLPLPGPEGNSSSLAAAASILLLLGDAPDGGNDFPPITHATL 627
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig13844.3050.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LKU2_ECTSI5.840e-1348.78Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig13844contigH-canaliculatus_F_contig13844:539..1565 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig13844.3050.1mRNA_H-canaliculatus_F_contig13844.3050.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig13844 539..2095 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig13844.3050.1 ID=prot_H-canaliculatus_F_contig13844.3050.1|Name=mRNA_H-canaliculatus_F_contig13844.3050.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=247bp
HEAGSVDANGRRVWVFHNFLAERGFRRQSLTGLSVWVANSTLSLLASTGP
PAHELDGVAGGGFVDGDGDGDGDGDDEDAFRFRFNRGFDGNSGLPLPGAE
GNGSSLAAAVAVLLLLGDEPDGGNEFPPITHATLHPGQERTGFGEGGRLT
KKALQGWTLFDRGLELDREGSRLSRLLLPSGLISSRGWRTGVAWALASIA
LRGSHTSSLWCGYVRADDRRVPRPVSLKFVSRDRDTAAEVVGCGCS*
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