mRNA_H-canaliculatus_F_contig13820.3037.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig13820.3037.1 vs. uniprot
Match: H6SIC8_PARPM (Uncharacterized protein (Fragment) n=1 Tax=Pararhodospirillum photometricum DSM 122 TaxID=1150469 RepID=H6SIC8_PARPM) HSP 1 Score: 98.2 bits (243), Expect = 2.490e-24 Identity = 59/114 (51.75%), Postives = 68/114 (59.65%), Query Frame = 2
Query: 29 QFIPTFFNRCGFGPPVSVT*PSS*SCLDHSVSGLIHLTHSP----Y*DSLSLRLHLTA*AC*IDQVRC---------HPSRGLQLFVGDRFQKLFHSPCRGAFHLSLTVLVHYR 331
Q IP FFNR GFGPPV VT PS+ LDH VSGLI T P + + + RL L Q++ P + L+L VG RFQ+LFHSP RGAFHLSLTVLVHYR
Sbjct: 2 QVIPVFFNRRGFGPPVGVTPPSTCPWLDHPVSGLIRRTRRPLKTRFRCASTYRLKLAR------QIKSLTHYTKGTPSPPKELRLLVGIRFQELFHSPHRGAFHLSLTVLVHYR 109
BLAST of mRNA_H-canaliculatus_F_contig13820.3037.1 vs. uniprot
Match: A0A132GPZ6_9BACT (Uncharacterized protein n=2 Tax=bacterium P201 TaxID=1768112 RepID=A0A132GPZ6_9BACT) HSP 1 Score: 93.6 bits (231), Expect = 8.470e-21 Identity = 61/120 (50.83%), Postives = 74/120 (61.67%), Query Frame = 1
Query: 1 SLIGLSPLGTIHPDLFQQVWVRTSS*CYLTFILIMPRSLGFGSDPSNSFAL-----LRLAFAAP-TPNGLS---LLDRPSTLSPLKGAPTVCRRPVSETVSLPLSGCFSPFPHGTGSLSV 333
SLIGLS L T HP+ FQ++ VR S CY F L M RSLGF S P+ S A LRL ++P T + ++ + + + K APT CRR VS T+SLP GCFSPFPHGT SLSV
Sbjct: 11 SLIGLSLLHTPHPEAFQRLLVRPSIPCYRDFSLDMCRSLGFASAPAYSTASSASLSLRLGASSPLTSHAMATRRFIMQKARRHHEKMAPTACRRMVSGTLSLPYYGCFSPFPHGTRSLSV 130
BLAST of mRNA_H-canaliculatus_F_contig13820.3037.1 vs. uniprot
Match: E6PDN8_9ZZZZ (Uncharacterized protein n=1 Tax=mine drainage metagenome TaxID=410659 RepID=E6PDN8_9ZZZZ) HSP 1 Score: 85.1 bits (209), Expect = 4.820e-18 Identity = 56/126 (44.44%), Postives = 65/126 (51.59%), Query Frame = 2
Query: 2 V*LAFHP*AQFIPTFFNRCGFGPPVSVT*PSS*SCLDHSVSGLIHLTHSPY*DSLSLRLHLTA*AC*I-DQVRCHPSRGLQLFVGDRFQKLFHSP---CR------------GAFHLSLTVLVHYR 331
V LAFHP Q I FFN FGPP + S+ +DH VSGL+ T+SPY DSLSLRL L + + H S +G R L H P CR G+FHLSLTVLVHYR
Sbjct: 103 VRLAFHPYPQLIQRFFNNDRFGPPHEINHASTWPWIDHPVSGLLQRTNSPYSDSLSLRLRLNTLTKPVTSNSQVHSS------IGTRLALLAHWPFTVCRHTVSYSISLPFGGSFHLSLTVLVHYR 222
BLAST of mRNA_H-canaliculatus_F_contig13820.3037.1 vs. uniprot
Match: A0A0K2VL77_LEPSM (Uncharacterized protein n=1 Tax=Lepeophtheirus salmonis TaxID=72036 RepID=A0A0K2VL77_LEPSM) HSP 1 Score: 79.7 bits (195), Expect = 8.200e-18 Identity = 39/43 (90.70%), Postives = 42/43 (97.67%), Query Frame = -2
Query: 84 LGLSSKLKPLGVGAAKASLNRANELDGSDPKPSDLGMIRMKVR 212
LGL+SKLKPLGVGAAKASLNRANEL GSDPKPSDLGMIR+KV+
Sbjct: 5 LGLTSKLKPLGVGAAKASLNRANELVGSDPKPSDLGMIRLKVQ 47
BLAST of mRNA_H-canaliculatus_F_contig13820.3037.1 vs. uniprot
Match: UPI001A08AA19 (Uncharacterized protein n=1 Tax=Pseudorhizobium halotolerans TaxID=1233081 RepID=UPI001A08AA19) HSP 1 Score: 80.1 bits (196), Expect = 5.300e-16 Identity = 51/99 (51.52%), Postives = 60/99 (60.61%), Query Frame = 1
Query: 61 VRTSS*CYLTFILIMPRSLGFGSDPSNSFALLRLAFAAPTPNGLSLLDRPSTL--------SPLKGAPTVCRRPVSETVSLPLSGCFSPFPHGTGSLSV 333
VR SS CY TF L+M RSLGFGS+ + ++ F L L +L SPL+ APTVCR PVS ++SLP SGCFSPFPHGT SLSV
Sbjct: 3 VRPSSWCYPTFSLLMARSLGFGSNATYYGRPVQTRFRYAYTYRLKLACYTKSLTHYTKGTPSPLR-APTVCRHPVSGSISLPSSGCFSPFPHGTCSLSV 100
BLAST of mRNA_H-canaliculatus_F_contig13820.3037.1 vs. uniprot
Match: A0A2S2PQL9_SCHGA (Uncharacterized protein (Fragment) n=1 Tax=Schizaphis graminum TaxID=13262 RepID=A0A2S2PQL9_SCHGA) HSP 1 Score: 77.8 bits (190), Expect = 2.010e-15 Identity = 37/40 (92.50%), Postives = 37/40 (92.50%), Query Frame = 1
Query: 214 TLSPLKGAPTVCRRPVSETVSLPLSGCFSPFPHGTGSLSV 333
T SPLKGAPT CRRPVSETVSLP SGCFSPFPHGTGSLSV
Sbjct: 17 TPSPLKGAPTACRRPVSETVSLPSSGCFSPFPHGTGSLSV 56
BLAST of mRNA_H-canaliculatus_F_contig13820.3037.1 vs. uniprot
Match: Q1YII1_AURMS (Uncharacterized protein n=1 Tax=Aurantimonas manganoxydans (strain ATCC BAA-1229 / DSM 21871 / SI85-9A1) TaxID=287752 RepID=Q1YII1_AURMS) HSP 1 Score: 73.6 bits (179), Expect = 8.400e-15 Identity = 49/95 (51.58%), Postives = 55/95 (57.89%), Query Frame = 2
Query: 74 VSVT*PSS*SCLDHSVSGLIHLTHSP------Y*DSLSLRL-HLTA*AC*IDQVRCHPSRGLQL--FVGDRFQKLFHSPCRGAFHLSLTVLVHYR 331
+ VT PS+ S LDHSVSGLI T P Y + L+L T + P L+L FVG RFQ LFHSPCRGAFHLSLTVLV YR
Sbjct: 1 MRVTAPSTCSWLDHSVSGLIRRTERPVQTRFRYASTYRLKLARQTKSLTHYTKGTMSPRTNLELHLFVGIRFQVLFHSPCRGAFHLSLTVLVRYR 95
BLAST of mRNA_H-canaliculatus_F_contig13820.3037.1 vs. uniprot
Match: A0A4Y3MCV7_9PROT (Uncharacterized protein n=1 Tax=Gluconobacter roseus NBRC 3990 TaxID=1307950 RepID=A0A4Y3MCV7_9PROT) HSP 1 Score: 64.3 bits (155), Expect = 9.600e-12 Identity = 31/39 (79.49%), Postives = 33/39 (84.62%), Query Frame = -2
Query: 84 SKLKPLGVGAAKASLNRANELDGSDPKPSDLGMIRMKVR 200
S+LKPLGVG AKASLNRANEL DPKPSDL M R+KVR
Sbjct: 9 SELKPLGVGVAKASLNRANELLAEDPKPSDLAMARLKVR 47
BLAST of mRNA_H-canaliculatus_F_contig13820.3037.1 vs. uniprot
Match: K8EDY4_CARML (Uncharacterized protein n=1 Tax=Carnobacterium maltaromaticum LMA28 TaxID=1234679 RepID=K8EDY4_CARML) HSP 1 Score: 65.9 bits (159), Expect = 1.120e-11 Identity = 35/61 (57.38%), Postives = 39/61 (63.93%), Query Frame = 2
Query: 2 V*LAFHP*AQFIPTFFNRCGFGPPVSVT*PSS*SCLDHSVSGLIHLTHSPY*DSLSLRLHL 184
V L F IP FFN GFGPPV +T PS+ + + H VSGL THSPY DSLSLRL L
Sbjct: 21 VRLEFLRYPHLIPAFFNIRGFGPPVRITAPSTWTWVGHLVSGLRPHTHSPYSDSLSLRLRL 81
BLAST of mRNA_H-canaliculatus_F_contig13820.3037.1 vs. uniprot
Match: H6SIC1_PARPM (Uncharacterized protein (Fragment) n=1 Tax=Pararhodospirillum photometricum DSM 122 TaxID=1150469 RepID=H6SIC1_PARPM) HSP 1 Score: 65.5 bits (158), Expect = 1.380e-11 Identity = 30/35 (85.71%), Postives = 31/35 (88.57%), Query Frame = 1
Query: 229 KGAPTVCRRPVSETVSLPLSGCFSPFPHGTGSLSV 333
+GAPT CR PVS TVSLP SGCFSPFPHGTGSLSV
Sbjct: 14 EGAPTACRHPVSGTVSLPSSGCFSPFPHGTGSLSV 48 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig13820.3037.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig13820.3037.1 >prot_H-canaliculatus_F_contig13820.3037.1 ID=prot_H-canaliculatus_F_contig13820.3037.1|Name=mRNA_H-canaliculatus_F_contig13820.3037.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=77bp MPRSLGFGSDPSNSFALLRLAFAAPTPNGLSLLDRPSTLSPLKGAPTVCRback to top mRNA from alignment at H-canaliculatus_F_contig13820:1466..1821- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig13820.3037.1 ID=mRNA_H-canaliculatus_F_contig13820.3037.1|Name=mRNA_H-canaliculatus_F_contig13820.3037.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=356bp|location=Sequence derived from alignment at H-canaliculatus_F_contig13820:1466..1821- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig13820:1466..1821- >mRNA_H-canaliculatus_F_contig13820.3037.1 ID=mRNA_H-canaliculatus_F_contig13820.3037.1|Name=mRNA_H-canaliculatus_F_contig13820.3037.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=462bp|location=Sequence derived from alignment at H-canaliculatus_F_contig13820:1466..1821- (Hapterophycus canaliculatus Oshoro5f female)back to top |