mRNA_H-canaliculatus_F_contig1379.3019.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig1379.3019.1
Unique NamemRNA_H-canaliculatus_F_contig1379.3019.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
BLAST of mRNA_H-canaliculatus_F_contig1379.3019.1 vs. uniprot
Match: A0A6H5JQI0_9PHAE (FA_desaturase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JQI0_9PHAE)

HSP 1 Score: 672 bits (1734), Expect = 1.480e-233
Identity = 306/327 (93.58%), Postives = 318/327 (97.25%), Query Frame = 1
Query:  220 MASDASDVLLEGRSLTLNPITLVKDTVETVIYHWKNKSINWPMSIYITLVHVAAVVGFCTIQDCKWQTCLLAFVLWPITGVGITGGVHRLWAHRSYDAHWSVRVFMMLINSMANQGSIYHWSRDHRVHHKYSETDADPHNAKRGFFFAHMGWLYVKKHPDVIAAGRTLNYADLEADPVVMFQDRLDPWFALFMCFVLPGLVAKHSWGEDFWHGFWVAGALRYCVVLHFTWFVNSAAHMFGDHPYDYKSWPSENPFVSICAIGEGWHNWHHKYPFDYAASEFGVSTQFNPTKMVIDGFAKLGLVTNRKRAVGAWSKLKERRDNEEMSS 1200
            MASDASDVLLEGRSLTLNP TL+KDTVETV+YHWKNKSINWPM+IYITLVH+AAV+GFCTIQDCKWQTCLLAFVLWPITG+GITGGVHRLWAHRSYDAHWSVRVFMMLINSMANQGSIYHWSRDHRVHHKYSETDADPHNAKRGFFFAHMGWLYVKKHP+VI AGRTL+YADLEADP+VMFQD LDPWFALFMCFVLP +VA   WGEDFWHGFWVAGALRY VVLHFTWFVNSAAHMFGDHPYD+KSWPSENPFVSICAIGEGWHNWHHKYPFDYAASEFGVSTQFNPTKM+IDGFAKLGLVTNRKRAVGAWSKLKERRDNEE SS
Sbjct:    1 MASDASDVLLEGRSLTLNPFTLIKDTVETVVYHWKNKSINWPMAIYITLVHMAAVLGFCTIQDCKWQTCLLAFVLWPITGLGITGGVHRLWAHRSYDAHWSVRVFMMLINSMANQGSIYHWSRDHRVHHKYSETDADPHNAKRGFFFAHMGWLYVKKHPEVIKAGRTLSYADLEADPIVMFQDSLDPWFALFMCFVLPAMVANRGWGEDFWHGFWVAGALRYVVVLHFTWFVNSAAHMFGDHPYDHKSWPSENPFVSICAIGEGWHNWHHKYPFDYAASEFGVSTQFNPTKMLIDGFAKLGLVTNRKRAVGAWSKLKERRDNEERSS 327          
BLAST of mRNA_H-canaliculatus_F_contig1379.3019.1 vs. uniprot
Match: A0A835YKG8_9STRA (Stearoyl-CoA desaturase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKG8_9STRA)

HSP 1 Score: 545 bits (1403), Expect = 1.120e-183
Identity = 247/329 (75.08%), Postives = 278/329 (84.50%), Query Frame = 1
Query:  220 MASDASDVLLEGRSLTLNPITLVKDTVETVIYHWKNKSINWPMSIYITLVHVAAVVGFCTIQDCKWQTCLLAFVLWPITGVGITGGVHRLWAHRSYDAHWSVRVFMMLINSMANQGSIYHWSRDHRVHHKYSETDADPHNAKRGFFFAHMGWLYVKKHPDVIAAGRTLNYADLEADPVVMFQDRLDPWFALFMCFVLPGLVAKHSWGEDFWHGFWVAGALRYCVVLHFTWFVNSAAHMFGDHPYDYKSWPSENPFVSICAIGEGWHNWHHKYPFDYAASEFGVSTQFNPTKMVIDGFAKLGLVTNRKRAVGAWSKLKERRDNEEMSSST 1206
            M  + S + ++ R LTLNPITL +DT E V YH+K  +INWPM  YITLVHVAAVVG C +    WQT L AF+LWPITG+GITGGVHRLWAHRSYDAHW+VRV++MLINSMANQGSIYHW+RDHRVHHK+SETDADPHNA+RGFFFAHMGWLYVKKHP VIAAGRTL+++DLE DPVVMFQD+LDPWFALFMCF  PGLVAK  WG++FW GFWVAGALRYC VLH TW VNSAAHMFGDHPYD  SWP+ENP VS+ ++GEGWHNWHHKYPFDYAASEFGV  Q+NPTK+ ID  A  GLVT RKRA GAW KLK+RRD  E + S+
Sbjct:    1 MPEEHSGIHVKQRFLTLNPITLARDTAEAVAYHYKEGNINWPMGAYITLVHVAAVVGLCYVPVASWQTRLWAFILWPITGLGITGGVHRLWAHRSYDAHWTVRVYLMLINSMANQGSIYHWARDHRVHHKHSETDADPHNAQRGFFFAHMGWLYVKKHPAVIAAGRTLDFSDLERDPVVMFQDKLDPWFALFMCFFFPGLVAKFGWGDNFWVGFWVAGALRYCWVLHCTWMVNSAAHMFGDHPYD-ASWPAENPLVSLLSVGEGWHNWHHKYPFDYAASEFGVGAQYNPTKLFIDACAAAGLVTKRKRAAGAWEKLKQRRDTAETAVSS 328          
BLAST of mRNA_H-canaliculatus_F_contig1379.3019.1 vs. uniprot
Match: A0A835YYM0_9STRA (Stearoyl-CoA desaturase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYM0_9STRA)

HSP 1 Score: 541 bits (1395), Expect = 3.300e-182
Identity = 243/321 (75.70%), Postives = 277/321 (86.29%), Query Frame = 1
Query:  241 VLLEGRSLTLNPITLVKDTVETVIYHWKNKSINWPMSIYITLVHVAAVVGFCTIQDCKWQTCLLAFVLWPITGVGITGGVHRLWAHRSYDAHWSVRVFMMLINSMANQGSIYHWSRDHRVHHKYSETDADPHNAKRGFFFAHMGWLYVKKHPDVIAAGRTLNYADLEADPVVMFQDRLDPWFALFMCFVLPGLVAKHSWGEDFWHGFWVAGALRYCVVLHFTWFVNSAAHMFGDHPYDYKSWPSENPFVSICAIGEGWHNWHHKYPFDYAASEFGVSTQFNPTKMVIDGFAKLGLVTNRKRAVGAWSKLKERRDNEEMSSS 1203
            ++++ R +TLNPI+L +DTV    +HW+  + NWPM IYITLVHVAA++G   +    W+T LLAF LWPI+G+GITGGVHRLWAHRSY+AHWSVRVF+MLINS+ANQGSIYHWSRDHRVHHK+SETDADPHNA+RGFFFAHMGWLYVKKHP+VIAAGRTL+++DLE DPVVMFQDRLDPWFALFMCF  PGLVAK+ WGE+FW GFWVAGALRYC VLH TW VNSAAHMFGDHPYD  SWP+ENP VSI A+GEGWHNWHHKYPFDYAASEFGV+ QFNPTK+ ID  A +GLV+ RKRA GAW KLKERRD  E  S+
Sbjct:   17 LIMKQRHMTLNPISLTRDTVAACRHHWREGTFNWPMGIYITLVHVAAIIGVMNVPAASWKTQLLAFALWPISGLGITGGVHRLWAHRSYEAHWSVRVFLMLINSIANQGSIYHWSRDHRVHHKHSETDADPHNAQRGFFFAHMGWLYVKKHPEVIAAGRTLDFSDLERDPVVMFQDRLDPWFALFMCFFFPGLVAKYGWGENFWVGFWVAGALRYCWVLHCTWCVNSAAHMFGDHPYD-NSWPAENPVVSILAVGEGWHNWHHKYPFDYAASEFGVAAQFNPTKLFIDACANVGLVSKRKRATGAWEKLKERRDEAEDGSA 336          
BLAST of mRNA_H-canaliculatus_F_contig1379.3019.1 vs. uniprot
Match: A0A7S3UXY6_HETAK (Hypothetical protein n=6 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UXY6_HETAK)

HSP 1 Score: 486 bits (1251), Expect = 2.980e-161
Identity = 219/313 (69.97%), Postives = 255/313 (81.47%), Query Frame = 1
Query:  277 ITLVKDTVETVIYHWKNKSINWPMSIYITLVHVAAVVGFCTIQDCKWQTCLLAFVLWPITGVGITGGVHRLWAHRSYDAHWSVRVFMMLINSMANQGSIYHWSRDHRVHHKYSETDADPHNAKRGFFFAHMGWLYVKKHPDVIAAGRTLNYADLEADPVVMFQDRLDPWFALFMCFVLPGLVAKHSWGEDFWHGFWVAGALRYCVVLHFTWFVNSAAHMFGDHPYDYKSWPSENPFVSICAIGEGWHNWHHKYPFDYAASEFGVSTQFNPTKMVIDGFAKLGLVTNRKRAVGAWSKLKERRDNEEMSSSTDEK 1215
            + L+KD+V T +YH K+ ++NWPM IYI LVHVA   G   I   +WQT L AF LWPI+G GITGGVHRLW+HRSY A++  R F ML NS+ANQGSIYHW+RDHRVHHK+SETDADPHNA RGFFFAHMGWL VKKHPDV+ AGR L+++DL+AD  VMFQ +LDPWF LFMCFV P LV  + WGEDFW GF+VAGA+RY  VLH TW VNSAAH++GDHPYD +SWP+ENPFVS+ A+GEGWHNWHHKYPFDY+ASEFGVS+QFNPTKM+ID  A  G+VT+RKRA GAW KLKE+RD EE   S D K
Sbjct:    4 VGLIKDSVTTSVYHLKHGNVNWPMLIYIALVHVAGFYGLMLITSSQWQTLLWAFTLWPISGFGITGGVHRLWSHRSYKANFIFRFFTMLANSIANQGSIYHWARDHRVHHKHSETDADPHNATRGFFFAHMGWLLVKKHPDVVKAGRELDFSDLDADWTVMFQKKLDPWFTLFMCFVFPALVGTYGWGEDFWTGFYVAGAVRYIYVLHVTWLVNSAAHLYGDHPYDPQSWPAENPFVSLGALGEGWHNWHHKYPFDYSASEFGVSSQFNPTKMIIDLAAACGMVTDRKRANGAWGKLKEKRDREEPELSKDSK 316          
BLAST of mRNA_H-canaliculatus_F_contig1379.3019.1 vs. uniprot
Match: A0A4D9CQB7_9STRA (FA_desaturase domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CQB7_9STRA)

HSP 1 Score: 480 bits (1236), Expect = 1.100e-158
Identity = 209/308 (67.86%), Postives = 249/308 (80.84%), Query Frame = 1
Query:  283 LVKDTVETVIYHWKNKSINWPMSIYITLVHVAAVVGFCTIQDCKWQTCLLAFVLWPITGVGITGGVHRLWAHRSYDAHWSVRVFMMLINSMANQGSIYHWSRDHRVHHKYSETDADPHNAKRGFFFAHMGWLYVKKHPDVIAAGRTLNYADLEADPVVMFQDRLDPWFALFMCFVLPGLVAKHSWGEDFWHGFWVAGALRYCVVLHFTWFVNSAAHMFGDHPYDYKSWPSENPFVSICAIGEGWHNWHHKYPFDYAASEFGVSTQFNPTKMVIDGFAKLGLVTNRKRAVGAWSKLKERRDNEEMSSST 1206
            L +D V  ++YH+K  ++NWPM IY+ L H+AA +G  +I  CKWQT L AF+LWPITG+GIT GVHRLWAHRSY A    R+ +ML NS+ANQGSIYHWSRDHRVHHKYSETDADPHNA RGFFFAHMGWL VKKHP V+  G+ L+++DL ADPVV FQ   DPWFA FMCFV+P LVA++ WGE FW+ FWVAG LRYC+VLHFTW VNSAAH++GDHPYD   WP+ENP VS+ AIGEGWHNWHH+YP+DYAASEFG+S QFNPTK  ID FA +G+V+NRKRA GAW+KL+E R  +E +  +
Sbjct:    5 LARDAVSALVYHYKEGNLNWPMIIYLVLAHLAAYMGLVSIPSCKWQTLLEAFILWPITGLGITAGVHRLWAHRSYTATLPYRILLMLFNSIANQGSIYHWSRDHRVHHKYSETDADPHNATRGFFFAHMGWLIVKKHPKVVEGGKQLDFSDLAADPVVRFQRDWDPWFAQFMCFVMPALVARYFWGEAFWNAFWVAGGLRYCLVLHFTWMVNSAAHLYGDHPYDPTIWPAENPLVSVVAIGEGWHNWHHRYPYDYAASEFGISRQFNPTKAFIDFFAAIGMVSNRKRATGAWAKLRESRAKDEANGKS 312          
BLAST of mRNA_H-canaliculatus_F_contig1379.3019.1 vs. uniprot
Match: A0A7S2UX82_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UX82_9STRA)

HSP 1 Score: 479 bits (1232), Expect = 1.590e-158
Identity = 213/308 (69.16%), Postives = 253/308 (82.14%), Query Frame = 1
Query:  286 VKDTVETVIYHWKNKSINWPMSIYITLVHVAAVVGFCTIQDCKWQTCLLAFVLWPITGVGITGGVHRLWAHRSYDAHWSVRVFMMLINSMANQGSIYHWSRDHRVHHKYSETDADPHNAKRGFFFAHMGWLYVKKHPDVIAAGRTLNYADLEADPVVMFQDRLDPWFALFMCFVLPGLVAKHSWGEDFWHGFWVAGALRYCVVLHFTWFVNSAAHMFGDHPYDYKSWPSENPFVSICAIGEGWHNWHHKYPFDYAASEFGVSTQFNPTKMVIDGFAKLGLVTNRKRAVGAWSKLKERRDNEEMSSSTD 1209
            +K+ ++T +YH+K  ++NWPM +YITLVHVAA VG  T+  C WQT L AF+LWPI+G GITGGVHRLW+HRSY A    R  +ML NS+ANQGSIYHWSRDHRVHHK+SETDADPHNA RGFFFAHMGWL VKKHPDVI AG+ L+++DL ADPVV+FQ R DPWFALFMCFVLPGLV    WG++FW+G+WVAGALRY  VLH TW VNSAAH++GDHPYD KSWP+ENP VS  A+GEGWHNWHHKYPFDYAASE+G+  QFNPTK++ID  A +G V+ RKRA GAW KLK+RR +E + +  +
Sbjct:    6 IKNALDTCVYHYKEGNVNWPMVVYITLVHVAACVGIWTVPKCTWQTLLWAFILWPISGFGITGGVHRLWSHRSYKARLPYRFVVMLANSIANQGSIYHWSRDHRVHHKHSETDADPHNATRGFFFAHMGWLLVKKHPDVIKAGKELDFSDLLADPVVVFQKRTDPWFALFMCFVLPGLVCT-LWGDNFWNGYWVAGALRYVYVLHCTWLVNSAAHLYGDHPYDPKSWPAENPMVSYAALGEGWHNWHHKYPFDYAASEYGLMAQFNPTKVLIDVCAMVGQVSQRKRATGAWEKLKDRRASEPLKAKAE 312          
BLAST of mRNA_H-canaliculatus_F_contig1379.3019.1 vs. uniprot
Match: A0A7S2UMM7_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UMM7_9STRA)

HSP 1 Score: 469 bits (1206), Expect = 2.560e-154
Identity = 203/304 (66.78%), Postives = 248/304 (81.58%), Query Frame = 1
Query:  277 ITLVKDTVETVIYHWKNKSINWPMSIYITLVHVAAVVGFCTIQDCKWQTCLLAFVLWPITGVGITGGVHRLWAHRSYDAHWSVRVFMMLINSMANQGSIYHWSRDHRVHHKYSETDADPHNAKRGFFFAHMGWLYVKKHPDVIAAGRTLNYADLEADPVVMFQDRLDPWFALFMCFVLPGLVAKHSWGEDFWHGFWVAGALRYCVVLHFTWFVNSAAHMFGDHPYDYKSWPSENPFVSICAIGEGWHNWHHKYPFDYAASEFGVSTQFNPTKMVIDGFAKLGLVTNRKRAVGAWSKLKERRDNE 1188
            I + +D  + V  HWK+ ++NWPM IYITLVH+ A VG  ++Q C   T + AF+LWPI+G GIT GVHRLW+HRSY+A   VR+F+ML NS++NQGSI+HW+RDHRVHHKYSETDADPHNA RGFFFAHMGWL+VKKHPDV+AAGR L+++DL  D  VMFQ +LDPWF L+MCFV+P  VA H WGEDFW+ F+VAGALRY +VLHFTW VNSAAH++GDHPYDY S+PSENP VS C++GEGWHNWHHKYPFDYAASE+G+S+QFNP+K+ ID  A +GLV  RKR   AW+  + RRD +
Sbjct:    5 IQMFRDIPKVVSQHWKDGTLNWPMGIYITLVHIVAAVGLFSVQKCSRDTLMFAFILWPISGFGITVGVHRLWSHRSYEAAAPVRLFLMLCNSISNQGSIFHWARDHRVHHKYSETDADPHNATRGFFFAHMGWLFVKKHPDVVAAGRQLDFSDLSEDAFVMFQKKLDPWFTLYMCFVMPAQVASHFWGEDFWNAFFVAGALRYVIVLHFTWLVNSAAHLYGDHPYDYLSYPSENPIVSFCSVGEGWHNWHHKYPFDYAASEYGISSQFNPSKLFIDILAAVGLVWGRKRGTAAWAHGRARRDRD 308          
BLAST of mRNA_H-canaliculatus_F_contig1379.3019.1 vs. uniprot
Match: A0A7S1ZS88_TRICV (Hypothetical protein n=2 Tax=Eupodiscales TaxID=33838 RepID=A0A7S1ZS88_TRICV)

HSP 1 Score: 467 bits (1201), Expect = 1.420e-153
Identity = 208/302 (68.87%), Postives = 247/302 (81.79%), Query Frame = 1
Query:  283 LVKDTVETVIYHWKNKSINWPMSIYITLVHVAAVVGFCTIQDCKWQTCLLAFVLWPITGVGITGGVHRLWAHRSYDAHWSVRVFMMLINSMANQGSIYHWSRDHRVHHKYSETDADPHNAKRGFFFAHMGWLYVKKHPDVIAAGRTLNYADLEADPVVMFQDRLDPWFALFMCFVLPGLVAKHSWGEDFWHGFWVAGALRYCVVLHFTWFVNSAAHMFGDHPYDYKSWPSENPFVSICAIGEGWHNWHHKYPFDYAASEFGVSTQFNPTKMVIDGFAKLGLVTNRKRAVGAWSKLKERRDNE 1188
            +V+D    V++H+K  +INWPM IYI+LVHV A VG  TI  C  +T L AF+LWPI+G GIT GVHRLW+HRSY+A    RVF+ML NS+ANQGSI+HW+RDHRVHHKYSETDADPHNA RGFFFAHMGWL+VKKHPDV+ AGR L++ DL  DPVVMFQ +LDPWF L+M +V P  VA + WGE+FW+GF+VAGALRY VVLHFTWFVNSAAH++GDHPYD  S+P+ENPFVS CAIGEGWHNWHHKYPFDYAASEFG+S+QFNP+K+ ID  A +GLV  RKR   AW+  K RR+ +
Sbjct:    7 MVRDIPSLVMHHYKEGNINWPMGIYISLVHVVAFVGLFTIPKCSAETLLWAFILWPISGFGITVGVHRLWSHRSYEAALPARVFLMLCNSIANQGSIFHWARDHRVHHKYSETDADPHNATRGFFFAHMGWLFVKKHPDVVKAGRELDFTDLSEDPVVMFQKKLDPWFTLYMSYVFPAQVASYFWGEEFWNGFFVAGALRYAVVLHFTWFVNSAAHLYGDHPYDVLSYPAENPFVSYCAIGEGWHNWHHKYPFDYAASEFGISSQFNPSKLFIDMMAAVGLVWGRKRGTAAWAMGKARRERD 308          
BLAST of mRNA_H-canaliculatus_F_contig1379.3019.1 vs. uniprot
Match: A0A6U0WYF9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A6U0WYF9_9STRA)

HSP 1 Score: 464 bits (1193), Expect = 1.080e-152
Identity = 199/298 (66.78%), Postives = 239/298 (80.20%), Query Frame = 1
Query:  286 VKDTVETVIYHWKNKSINWPMSIYITLVHVAAVVGFCTIQDCKWQTCLLAFVLWPITGVGITGGVHRLWAHRSYDAHWSVRVFMMLINSMANQGSIYHWSRDHRVHHKYSETDADPHNAKRGFFFAHMGWLYVKKHPDVIAAGRTLNYADLEADPVVMFQDRLDPWFALFMCFVLPGLVAKHSWGEDFWHGFWVAGALRYCVVLHFTWFVNSAAHMFGDHPYDYKSWPSENPFVSICAIGEGWHNWHHKYPFDYAASEFGVSTQFNPTKMVIDGFAKLGLVTNRKRAVGAWSKLKERR 1179
            V D +     H+K+  +NWPM IY+T VH  A++G   +    W+T L  F+LWPI+G+GIT G HRLWAHRSYDAHWSVR+ +ML NS+ANQGS++HW RDHRVHHK+SET ADPHNA RGFFFAH+GWL VKKH DVIAAG+ L+Y DL+ADP+VMFQ RLDPWF LFMC+++PG VA+H WGEDFW   W+AGALRYC VLHFTW VNSAAH++G+ PYD   W SENP VS+ ++GEGWHNWHHKYP+DYAASEFGV+ QFNPTK+ ID  A LGLV NRKRA G W +L+E+R
Sbjct:    3 VMDAINAFTRHYKSGDLNWPMMIYVTFVHTTALLGVFQLFSVSWKTLLWGFILWPISGLGITAGAHRLWAHRSYDAHWSVRLILMLANSIANQGSLFHWCRDHRVHHKHSETHADPHNATRGFFFAHVGWLLVKKHKDVIAAGKELSYDDLKADPLVMFQKRLDPWFTLFMCYLMPGYVAQHCWGEDFWKAVWIAGALRYCAVLHFTWLVNSAAHLYGNRPYDPNHWTSENPLVSLASLGEGWHNWHHKYPYDYAASEFGVARQFNPTKLFIDTCAALGLVANRKRATGPWMRLREKR 300          
BLAST of mRNA_H-canaliculatus_F_contig1379.3019.1 vs. uniprot
Match: B8C1K5_THAPS (Predicted protein n=3 Tax=Thalassiosirales TaxID=33847 RepID=B8C1K5_THAPS)

HSP 1 Score: 461 bits (1187), Expect = 2.070e-151
Identity = 207/307 (67.43%), Postives = 245/307 (79.80%), Query Frame = 1
Query:  262 LTLNPITLVKDTVETVIYHWKNKSINWPMSIYITLVHVAAVVGFCTIQDCKWQTCLLAFVLWPITGVGITGGVHRLWAHRSYDAHWSVRVFMMLINSMANQGSIYHWSRDHRVHHKYSETDADPHNAKRGFFFAHMGWLYVKKHPDVIAAGRTLNYADLEADPVVMFQDRLDPWFALFMCFVLPGLVAKHSWGEDFWHGFWVAGALRYCVVLHFTWFVNSAAHMFGDHPYDYKSWPSENPFVSICAIGEGWHNWHHKYPFDYAASEFGVSTQFNPTKMVIDGFAKLGLVTNRKRAVGAWSKLKERRD 1182
            L+LN IT +   +    +HWK  +INWPMSIYITL+HV  +VG   + D  W+T + AF+LWPI+G GIT GVHRLW+HRSY A + VR  +ML NS+ANQGSIYHW+RDHRVHHKYSETDADPHNA RGFFFAHMGWLYVKKHP+V+ AG+ L+++DL+ D VVMFQ +LDPWFAL+MCFVLP  +A   WGEDFW  F+VAG LRY  VLHFTW VNSAAH++GDHPYD  S+PSENP+VS  A+GEGWHNWHHKYPFDYAASEFGVS+QFNP+K+VID  A +GLV  RKR   AW   + RRD
Sbjct:    3 LSLNMITSIPSVIA---HHWKAGTINWPMSIYITLIHVIGIVGATKVADASWETLMWAFILWPISGFGITVGVHRLWSHRSYTASFPVRFALMLCNSIANQGSIYHWARDHRVHHKYSETDADPHNAMRGFFFAHMGWLYVKKHPEVVRAGKELDFSDLKEDSVVMFQKKLDPWFALYMCFVLPAQIASKYWGEDFWTAFFVAGGLRYMAVLHFTWLVNSAAHLYGDHPYDVLSYPSENPYVSFFAVGEGWHNWHHKYPFDYAASEFGVSSQFNPSKLVIDLLAAVGLVWGRKRGTAAWDMGRARRD 306          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1379.3019.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JQI0_9PHAE1.480e-23393.58FA_desaturase domain-containing protein n=2 Tax=Ec... [more]
A0A835YKG8_9STRA1.120e-18375.08Stearoyl-CoA desaturase n=1 Tax=Tribonema minus Ta... [more]
A0A835YYM0_9STRA3.300e-18275.70Stearoyl-CoA desaturase n=1 Tax=Tribonema minus Ta... [more]
A0A7S3UXY6_HETAK2.980e-16169.97Hypothetical protein n=6 Tax=Heterosigma akashiwo ... [more]
A0A4D9CQB7_9STRA1.100e-15867.86FA_desaturase domain-containing protein n=3 Tax=Mo... [more]
A0A7S2UX82_9STRA1.590e-15869.16Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2UMM7_9STRA2.560e-15466.78Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S1ZS88_TRICV1.420e-15368.87Hypothetical protein n=2 Tax=Eupodiscales TaxID=33... [more]
A0A6U0WYF9_9STRA1.080e-15266.78Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
B8C1K5_THAPS2.070e-15167.43Predicted protein n=3 Tax=Thalassiosirales TaxID=3... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1379contigH-canaliculatus_F_contig1379:13165..19109 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score651.0
Seed ortholog evalue3.1e-184
Seed eggNOG ortholog2880.D8LSZ1
Preferred nameSCD5
KEGG rclassRC00917
KEGG koko:K00507,ko:K06227,ko:K15331,ko:K20641
KEGG ReactionR02222
KEGG Pathwayko01040,ko01212,ko03320,ko04152,ko04212,ko04341,map01040,map01212,map03320,map04152,map04212,map04341
GOsGO:0000003,GO:0000278,GO:0000281,GO:0000910,GO:0001101,GO:0001676,GO:0002376,GO:0003674,GO:0003824,GO:0004768,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005783,GO:0005789,GO:0006082,GO:0006139,GO:0006163,GO:0006164,GO:0006629,GO:0006631,GO:0006633,GO:0006636,GO:0006637,GO:0006638,GO:0006639,GO:0006641,GO:0006723,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006952,GO:0006955,GO:0007049,GO:0007154,GO:0007272,GO:0007275,GO:0007399,GO:0007584,GO:0007610,GO:0007617,GO:0007618,GO:0007619,GO:0008150,GO:0008152,GO:0008202,GO:0008361,GO:0008366,GO:0008610,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009605,GO:0009607,GO:0009617,GO:0009743,GO:0009744,GO:0009889,GO:0009893,GO:0009894,GO:0009987,GO:0009991,GO:0010033,GO:0010506,GO:0010817,GO:0010872,GO:0010873,GO:0012505,GO:0016020,GO:0016021,GO:0016043,GO:0016053,GO:0016215,GO:0016491,GO:0016705,GO:0016717,GO:0018130,GO:0019098,GO:0019216,GO:0019218,GO:0019222,GO:0019438,GO:0019637,GO:0019693,GO:0019748,GO:0019752,GO:0019953,GO:0022402,GO:0022414,GO:0030104,GO:0030154,GO:0030176,GO:0030258,GO:0031224,GO:0031227,GO:0031323,GO:0031325,GO:0031329,GO:0031410,GO:0031667,GO:0031668,GO:0031669,GO:0031670,GO:0031974,GO:0031981,GO:0031982,GO:0031984,GO:0032501,GO:0032502,GO:0032504,GO:0032535,GO:0032787,GO:0032896,GO:0033500,GO:0033559,GO:0033561,GO:0033865,GO:0033866,GO:0033875,GO:0033993,GO:0034030,GO:0034032,GO:0034033,GO:0034285,GO:0034433,GO:0034434,GO:0034435,GO:0034641,GO:0034654,GO:0035337,GO:0035383,GO:0035384,GO:0040008,GO:0040014,GO:0040018,GO:0042175,GO:0042221,GO:0042335,GO:0042445,GO:0042446,GO:0042552,GO:0042592,GO:0042593,GO:0042594,GO:0042742,GO:0042759,GO:0042810,GO:0042811,GO:0043167,GO:0043169,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043436,GO:0043588,GO:0043603,GO:0043604,GO:0043900,GO:0043901,GO:0043903,GO:0044126,GO:0044130,GO:0044144,GO:0044146,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0044550,GO:0044703,GO:0045087,GO:0045444,GO:0045540,GO:0045570,GO:0045572,GO:0045793,GO:0045834,GO:0045926,GO:0045927,GO:0045940,GO:0046390,GO:0046394,GO:0046483,GO:0046486,GO:0046620,GO:0046622,GO:0046872,GO:0046890,GO:0046914,GO:0046949,GO:0048047,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048609,GO:0048638,GO:0048639,GO:0048731,GO:0048732,GO:0048733,GO:0048856,GO:0048869,GO:0048871,GO:0048878,GO:0050789,GO:0050793,GO:0050794,GO:0050810,GO:0050830,GO:0050872,GO:0050873,GO:0050878,GO:0050891,GO:0050896,GO:0051094,GO:0051186,GO:0051188,GO:0051239,GO:0051240,GO:0051301,GO:0051704,GO:0051707,GO:0051716,GO:0055086,GO:0055088,GO:0055090,GO:0055114,GO:0060179,GO:0061640,GO:0062012,GO:0065007,GO:0065008,GO:0070013,GO:0070328,GO:0070542,GO:0070887,GO:0071496,GO:0071616,GO:0071704,GO:0071840,GO:0072330,GO:0072521,GO:0072522,GO:0080090,GO:0090066,GO:0090181,GO:0090407,GO:0097708,GO:0098542,GO:0098827,GO:0106118,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901568,GO:1901570,GO:1901576,GO:1901700,GO:1902930,GO:1903047,GO:1903699,GO:1903964,GO:1903966,GO:2000026
EggNOG free text desc.oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water
EggNOG OGsCOG1398@1,KOG1600@2759
EC1.14.19.1,2.1.1.35
COG Functional cat.I
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01004,ko03016,ko04131
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionstearoyl-CoA desaturase
Ec32 orthologEc-26_001950.1
Exons3
Model size3047
Cds size1020
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1379.3019.1prot_H-canaliculatus_F_contig1379.3019.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig1379 13384..17301 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929120.6989567-UTR-H-canaliculatus_F_contig1379:13164..133831622929120.6989567-UTR-H-canaliculatus_F_contig1379:13164..13383Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1379 13165..13383 +
1696845686.0142033-UTR-H-canaliculatus_F_contig1379:13164..133831696845686.0142033-UTR-H-canaliculatus_F_contig1379:13164..13383Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1379 13165..13383 +
1622929120.7688396-UTR-H-canaliculatus_F_contig1379:17301..191091622929120.7688396-UTR-H-canaliculatus_F_contig1379:17301..19109Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1379 17302..19109 +
1696845686.062109-UTR-H-canaliculatus_F_contig1379:17301..191091696845686.062109-UTR-H-canaliculatus_F_contig1379:17301..19109Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1379 17302..19109 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929120.7191012-CDS-H-canaliculatus_F_contig1379:13383..136191622929120.7191012-CDS-H-canaliculatus_F_contig1379:13383..13619Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1379 13384..13619 +
1696845686.0266235-CDS-H-canaliculatus_F_contig1379:13383..136191696845686.0266235-CDS-H-canaliculatus_F_contig1379:13383..13619Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1379 13384..13619 +
1622929120.7329192-CDS-H-canaliculatus_F_contig1379:15856..164231622929120.7329192-CDS-H-canaliculatus_F_contig1379:15856..16423Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1379 15857..16423 +
1696845686.0374787-CDS-H-canaliculatus_F_contig1379:15856..164231696845686.0374787-CDS-H-canaliculatus_F_contig1379:15856..16423Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1379 15857..16423 +
1622929120.7493136-CDS-H-canaliculatus_F_contig1379:17084..173011622929120.7493136-CDS-H-canaliculatus_F_contig1379:17084..17301Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1379 17085..17301 +
1696845686.0499308-CDS-H-canaliculatus_F_contig1379:17084..173011696845686.0499308-CDS-H-canaliculatus_F_contig1379:17084..17301Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1379 17085..17301 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig1379.3019.1

>prot_H-canaliculatus_F_contig1379.3019.1 ID=prot_H-canaliculatus_F_contig1379.3019.1|Name=mRNA_H-canaliculatus_F_contig1379.3019.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=340bp
MASDASDVLLEGRSLTLNPITLVKDTVETVIYHWKNKSINWPMSIYITLV
HVAAVVGFCTIQDCKWQTCLLAFVLWPITGVGITGGVHRLWAHRSYDAHW
SVRVFMMLINSMANQGSIYHWSRDHRVHHKYSETDADPHNAKRGFFFAHM
GWLYVKKHPDVIAAGRTLNYADLEADPVVMFQDRLDPWFALFMCFVLPGL
VAKHSWGEDFWHGFWVAGALRYCVVLHFTWFVNSAAHMFGDHPYDYKSWP
SENPFVSICAIGEGWHNWHHKYPFDYAASEFGVSTQFNPTKMVIDGFAKL
GLVTNRKRAVGAWSKLKERRDNEEMSSSTDEKTGKMKST*
back to top

mRNA from alignment at H-canaliculatus_F_contig1379:13165..19109+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig1379.3019.1 ID=mRNA_H-canaliculatus_F_contig1379.3019.1|Name=mRNA_H-canaliculatus_F_contig1379.3019.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=5945bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1379:13165..19109+ (Hapterophycus canaliculatus Oshoro5f female)
CAAAAGCTTTCGGGACGGAAACCTAGAGTCGTCCAACATTCGTAATACGC ACTCTGTGCCGCCAGCCCCGCACACATCGAAGCACACACTTTCATCTGTG GCTGGCCCCGCACTCCAGGAACGCGCTCAGCAACGAGGTTTTTGAACGCA AGCAAGGCTCACGAGCAGGAGGGGGGAGACATAATCATTTCGGAGCCCGA GGTCACGCGAAACATCACCATGGCGTCTGATGCCTCCGACGTCCTGCTGG AGGGGCGCTCCCTGACGCTGAACCCCATCACGCTGGTGAAGGACACGGTC GAGACGGTGATCTACCACTGGAAGAACAAGTCCATCAACTGGCCCATGTC CATATACATCACTCTCGTGCACGTGGCTGCCGTGGTAGGGTTCTGCACGA TCCAAGACTGCAAGTGGCAGACCTGCCTGCTGGCCTTCGTCCTGTGGCCG ATCACGTGAGTTTTCGTCTTTTCGCGTTTTTCTCTTCTCTTGGCCGCGCT TTTTCCCCGCTGCGACTGTGACTGCCCGGTGAAAGATGCAGCCCAATCTG GCACCGTGAGCCCATGGGCGCTCTCACGACGCCCCTCGCGTCTCCCGTAC GTGAACATCCGTCGAAATTAGCAAAACGGTTGGGAAAATAAATATGAGGA GGCAATCAAAAAGGAAGCGCCTTTTTTTGCAAGAGAGATGCGTCTCCTTC CTCTGGTACCCACCTTGAAAGACGAGGCACCAAGAGGAAAATTGGAGCTC CTTTTCGAACTTGGAATCCGGCCACCGCTGCCCTAGCCTGCTTAAGGATG CCGTTGACGCTTAGCGCCTCACGGCGGCAAAGGAACTTTTAAATTTATTT TCCCAGACGCTTCGAGAAGAATCGCGTCAGAAGGGCAATTTCGTATTTCA TGGAGCAGCAGCTGCTCTAATGAGCAACGTTAAAGAAAATCACTTGTATT TGAGGAAGTAGAGGTTTCGAAGGGCAGGAGCCTTTCAGGTTTCCACTGAA TTGTGCTTGCCCCATGAGCGCATACCCGTTCATGCCATGCGACGCCGCAG TTCGTTTACTGGCGAGCAGAGAAGAACTTCCGACTCGGTCGTCTCTCTTC TCGGCAGAAAATCACTACACAAGACACGCACTCTGGAGGGTAACGTACAG GAGTCACAAGAAAGAGCCATCGAGGACGTACACATCCGTACTGGTTCGTA CTTTTGAAATGCAGCAGTCTTTTTCTTTTTCTCTCGCGTGATGGCTGCGG CGATCGTTGTAGTGACGACTGTTCGGGTTCTAAGATGATGCGCACGCCAC CTGACGCTGGGCAGAAGATGTGTAGACTCCGTTGTCTGGCGCCTGGTGGT GACGGCAGCCTCATGTTGTTCTGTCGACTCAACACAAAACACACGGCTCA AAACACAAGGATCAAACGATCAGAGCGTGGTGAGGCGAGGTGACATGCAG GCTGATCCAGAACTCCGGCGCATCTGTCAGTCGCGAAACAAGACCGCGGT GTTTTGATTGCGAGAGCGTTCGCAGAGCTGCCAGCGATTGCCGTCGTGTC TCCGGGTGTAGAGCAGGCCTTGATCAAGAGTGGTCGCTGCTGACATTTCC GTCGAGGTTGCGCGCAAGGGCGTGAATTGTGGGAAGCTGGAACGCCGGAA CCCCCTCTTTCGAACGGATTCATTTTCGTTTTTCCTTGGATTGCCTGTAT CCTTCGACTTAGCCCGCCGTGTCGTCGTTCGAGTTAGCGGTGTCCTACAT CCCTCGTACATACCCCCCCACCGAGATATTCATAGATATCGAAGCTTGTT CGTGAATGTTGTTGGCACCGTCGTGCCGTCTCTCCGGCCCAACCCTTGAT CCACGGGTCGACTGAGGTCACTAGTTCGCCGATTCGAAAACGACGTTGGG ATTTCAAATCATTGCCGCGAAAATTTGTGCGGCAGATTTGCAGCCGGGAG TGGACTCGATCCATCCCGCGTGGCACTTACTTGGTGCAGCCCAATGCACA AGACCCGTTTGAACGTCGAGTGGGTCGCGCACTCCTTCTCCTGGCGCTAG CATCAGCAAACCAGACCCACGAAAGAGTACAACGTCCTTGAAATTATACT CATGCGAGCGTACCCTTCGTTCTGTAGCCCCTTTCTTTCATGCCGTACAC CCTCGAGGACGTTCTTACGTACATAATAGATCAACGGAGGGGCGTTACTA CAAGTATGGGATGCGGAGTCGCGAAATGCAAATCCGCAGAAACTCGTAGC AGCTTCCCAACCCATCGAACGACACACCGCGGACGAAGCTACAGCAACGA TCGCGTCAGCGTTACCTCGGTATTTGTCGCGCACCGGCCCGGAGGTATAA CGGCTATTAAGCCTTTCGTTTTTGCTGACAGACTCGCGAATTGTGAGACG ACTCGACCCGAATTTGGCGTCCCCGGGTGTCTGCTGTGCACCTGCAAGAC ACGAGAGTCCAAAACGTTTTCTTACCGTCCAGCCTTTTCGGGCGGGGCTC GAACCAATCTCTCCGTTATTTCGAGGCCAACAACCAACGTAGTGGTCTCA CCTATCTCTATCTCGTCTCTCTCCCACCCCTTACCCCTGACACACACCTC ACCCCTTGCGCCCCCCTCCCTCGTGCTCCCTCGCCCTCCTTTTCCCAAAA CCTGACCCTCGATGATCGCGGACTCCCTCCTTCCTCCTGCAGTGGGGTCG GCATCACCGGCGGGGTTCACCGTCTGTGGGCCCACCGCTCCTACGACGCG CACTGGTCCGTCCGAGTGTTCATGATGCTCATCAACTCGATGGCGAACCA GGGCTCCATCTACCACTGGTCCCGGGATCACCGGGTGCACCACAAGTACT CGGAGACGGACGCTGATCCCCACAACGCCAAGCGCGGCTTCTTCTTCGCG CACATGGGCTGGTTGTACGTTAAGAAGCACCCGGACGTGATCGCGGCCGG CCGCACCCTCAACTACGCCGACCTCGAGGCCGACCCGGTTGTGATGTTCC AGGACCGCCTTGACCCCTGGTTCGCCCTCTTCATGTGCTTCGTGCTGCCT GGACTGGTGGCGAAGCACTCGTGGGGAGAGGACTTCTGGCACGGCTTCTG GGTGGCGGGGGCTCTGCGGTACTGCGTCGTGCTGCACTTCACCTGGTTCG TTAACTCCGCAGCGCACATGTTCGGGGACCACCCGTACGACTACAAGTCG TGGCCTTCGGAGAACCCGTTCGTGTCCATCTGCGCCATCGGAGAGGGATG GCACAACTGGTGAGTTTTTGTCATCTTTTTGTCGGGCGGTCTCCCGGGTA CAGTGCGGTACTCGTGGGCGTCGCCTCGGATGGAGCACTTGTGGTGTTGA GATGGGTTGACGGTAAGGGTGGGGAGGAGGAGGAAGGGTGCAAAAGAGTC CTATGGACCGCACCTTCCGGGACCCTGGTACTTGGTGTGCCTGGGCGGAG TCTCTCCTCTGCGCATTTTTTTTTTTTCTTTGCGGATGTGGGACGGCGCC ACTCAACCGCGAGTGCGTGCGCGCGGCGGCGCTCGGCCAACGCTACAGCA GCTTGTCGAAGCATACTGTCCTCTTTTGTTCTGCTCCTGAGCGCCGCTGC GTCCGTACGTGAGAAGGCGCTTGCTCTTGCTTGTGGCACTCCTTGTAGTC GGGACGAAACCGGGCCCCTTTTGAGGGCCTGGAGTTTGGAGCGGCATGCC CCGCCTTTCCAGATGTCGAGAACGCGTCTTCCCCTCGCCCTCATCCTTTT GAGAAAGAGACGGCCCTGATGTAACGCGTGCGTCTCAGGCCTACCGTTGG TGTTCAGCGCCGCATTCCGTCCTCTTCTCTGGGAGTCAAGCGATTCTCCC GCTGTTCGTGTATCTGCTGCTCTGACAAAAGCATCCTCTTTCGCGGTACC GACGTCGTCCGTTTGTCCAGGCACCACAAGTACCCCTTCGACTACGCCGC GTCGGAGTTCGGCGTGAGCACCCAGTTCAACCCCACCAAGATGGTCATCG ACGGGTTCGCGAAGCTGGGGCTCGTGACCAACCGCAAGCGGGCGGTCGGT GCGTGGTCGAAGCTCAAGGAGCGCCGCGACAACGAAGAGATGAGCTCCTC CACGGACGAGAAGACCGGCAAGATGAAGTCAACATGATGAAAGTGACATT CAGGGGGGGGGGCTGGGGTTAGAGAGAAAAGGCTTTGTGGCACGCGGTTT GCTGATTGGTCAAGACCTTTTCTCTGAACGTGAATGACGTGAAGAAAACG AGAGGAAAACTCGGCGAGACGCTGATTGCCCGTGTCTGGGACTGAAAATC AGGGAACTGGGGAAGGGGGTCTCTGCCGTGCGGCGGCTTTTATTCGAGCG TCCCGATGACACTTTGGATCGCCGACTGGGCAGAGGGGGGCAGGCAAGAA AAGGTGCTATCTGTGGACGCTCTACTCGAATGACCAAGTCGACATTGCTT GGATGGTTTTTGATAAGCGGGGAGCTGGAGACGTTTAAGTTGCTTCTTGG GGCTCGGATTTATGATTTGACGTGAGAGCTGAAACGATTTTCGGTTGCGC TTTTTAGGACGTGCCGAAGCAGAACAAGACTTAAAAACTGAGAGCGGGGG TGTGCTGTGTGTGGGTATTTTACCTGCTGTGGTGTTTTTTGATGTGCTCG TGCGTCTTGGTGGGATGATGTACTACCGTAGGTCGAGCGCAAGCGCGAGA AGAAGGAAACAGGAAAAAAATAAAACTTGACGAAAATGCCGTCTGTCTGT GTGCGCGCCCGATGCTGTTTCGGTGCACAAGGTCGAACTTTGTGTGTTCT TTGTTTTTTGTGGGGAATCGTTGGGGAGAGGGGCCGCTGTCGTCACCTCG TCCAGCGCGGATCGTCGCCTTTAACTCGTCTCCTCGTTGTCCGTGCGTTG CACACTTTATCTAGAGAGCCTTGGTGTCTGTTGTTTTCTTGAGCTTCCGG GGTCTCGGTGTCGGATGCAGCGGTGTGAGCGTCCAGTGGTTATTGGAGGC AAGGTCATGCTTGCTTTCCGCGCACGAGGTGTGGCGGTGGTGGGACGTCC AGAGAATACGAGGAGCGGCCGCTGCTGTCTGTTGGGGTTGAACTTTTTGT GTTGCGGCAGAAACATGGAACACGACACATTTGAGAAGCTGCGTGGTTGT GCCGATGGTCGCATGCGAGAGGAAGGGATGCGTCAAAGCGGAAGGAGTCG ATGGATGCCGCTCGTGGCTCTGCCGTGAGCCTGCGTTTGAGAGCATTCCC TCAGCAGATGGCCCTCGTATTGTTCGTTCGTCAGCCCGCGTTCGATTGAT GCGTGGCACGGCTCTGGTGTTTTGAGTTTGCCACGAACTAGTTTCTACCA GCGTGCTGCGTAGTGTGTGGTCTCGGGGAGGGATCTCTCGAGCATGACTA GCATGATCGTCGAGGTGCCCCCCTTATTGTACGTACACATGGACGCTGTT GTCGGTTGTTTAAAGCCGTGGGTTTGGCGAAGGCTGATCTCACGGCTCTC CAAACTCGAAGGGAAAGGGGGCAGTGGTGGACGAGTGTTCAGCCTCTTGT CGATTTCCTGAATGAATGTCTTCTTTTTTTTCGGTTTGTGCGCCTCCGGG CTAGTGGCTTTTTCCCGAGGCGACGAGCCGGGATGGCATCATGACGTCGT GGCGCGTGCTCTGAGGCGACGTCCCTGCAGGCGGCGGCACCACTCGTGGG CCTCGTCTTGGGAAAGTCTTGACACGAGGAGGAGGCACCCATATTTTTTC CAGAATGAACCACCCGAAAAGCCAATTTTGCGCGGTGGTGAACAAATAGG ACAGTACCGCCAGCACGCCATATACCTTTGCCGGGTCGGGGACGTCGACA GCGTAAACTCGGAATGCGTGAAAAAAACGCCCAGTGTAGAACGAACGCAT GGACGGTCACCCAACAGACCGGTCGGTCTTGCCTACTCACACCCG
back to top

Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1379:13165..19109+

>mRNA_H-canaliculatus_F_contig1379.3019.1 ID=mRNA_H-canaliculatus_F_contig1379.3019.1|Name=mRNA_H-canaliculatus_F_contig1379.3019.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=2040bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1379:13165..19109+ (Hapterophycus canaliculatus Oshoro5f female)
ATGGCGTCTGATGCCTCCGACGTCCTGCTGGAGGGGCGCTCCCTGACGCT
GAACCCCATCACGCTGGTGAAGGACACGGTCGAGACGGTGATCTACCACT
GGAAGAACAAGTCCATCAACTGGCCCATGTCCATATACATCACTCTCGTG
CACGTGGCTGCCGTGGTAGGGTTCTGCACGATCCAAGACTGCAAGTGGCA
GACCTGCCTGCTGGCCTTCGTCCTGTGGCCGATCACATGGCGTCTGATGC
CTCCGACGTCCTGCTGGAGGGGCGCTCCCTGACGCTGAACCCCATCACGC
TGGTGAAGGACACGGTCGAGACGGTGATCTACCACTGGAAGAACAAGTCC
ATCAACTGGCCCATGTCCATATACATCACTCTCGTGCACGTGGCTGCCGT
GGTAGGGTTCTGCACGATCCAAGACTGCAAGTGGCAGACCTGCCTGCTGG
CCTTCGTCCTGTGGCCGATCACTGGGGTCGGCATCACCGGCGGGGTTCAC
CGTCTGTGGGCCCACCGCTCCTACGACGCGCACTGGTCCGTCCGAGTGTT
CATGATGCTCATCAACTCGATGGCGAACCAGGGCTCCATCTACCACTGGT
CCCGGGATCACCGGGTGCACCACAAGTACTCGGAGACGGACGCTGATCCC
CACAACGCCAAGCGCGGCTTCTTCTTCGCGCACATGGGCTGGTTGTACGT
TAAGAAGCACCCGGACGTGATCGCGGCCGGCCGCACCCTCAACTACGCCG
ACCTCGAGGCCGACCCGGTTGTGATGTTCCAGGACCGCCTTGACCCCTGG
TTCGCCCTCTTCATGTGCTTCGTGCTGCCTGGACTGGTGGCGAAGCACTC
GTGGGGAGAGGACTTCTGGCACGGCTTCTGGGTGGCGGGGGCTCTGCGGT
ACTGCGTCGTGCTGCACTTCACCTGGTTCGTTAACTCCGCAGCGCACATG
TTCGGGGACCACCCGTACGACTACAAGTCGTGGCCTTCGGAGAACCCGTT
CGTGTCCATCTGCGCCATCGGAGAGGGATGGCACAACTGTGGGGTCGGCA
TCACCGGCGGGGTTCACCGTCTGTGGGCCCACCGCTCCTACGACGCGCAC
TGGTCCGTCCGAGTGTTCATGATGCTCATCAACTCGATGGCGAACCAGGG
CTCCATCTACCACTGGTCCCGGGATCACCGGGTGCACCACAAGTACTCGG
AGACGGACGCTGATCCCCACAACGCCAAGCGCGGCTTCTTCTTCGCGCAC
ATGGGCTGGTTGTACGTTAAGAAGCACCCGGACGTGATCGCGGCCGGCCG
CACCCTCAACTACGCCGACCTCGAGGCCGACCCGGTTGTGATGTTCCAGG
ACCGCCTTGACCCCTGGTTCGCCCTCTTCATGTGCTTCGTGCTGCCTGGA
CTGGTGGCGAAGCACTCGTGGGGAGAGGACTTCTGGCACGGCTTCTGGGT
GGCGGGGGCTCTGCGGTACTGCGTCGTGCTGCACTTCACCTGGTTCGTTA
ACTCCGCAGCGCACATGTTCGGGGACCACCCGTACGACTACAAGTCGTGG
CCTTCGGAGAACCCGTTCGTGTCCATCTGCGCCATCGGAGAGGGATGGCA
CAACTGGCACCACAAGTACCCCTTCGACTACGCCGCGTCGGAGTTCGGCG
TGAGCACCCAGTTCAACCCCACCAAGATGGTCATCGACGGGTTCGCGAAG
CTGGGGCTCGTGACCAACCGCAAGCGGGCGGTCGGTGCGTGGTCGAAGCT
CAAGGAGCGCCGCGACAACGAAGAGATGAGCTCCTCCACGGACGAGAAGA
CCGGCAAGATGAAGTCAACATGAGCACCACAAGTACCCCTTCGACTACGC
CGCGTCGGAGTTCGGCGTGAGCACCCAGTTCAACCCCACCAAGATGGTCA
TCGACGGGTTCGCGAAGCTGGGGCTCGTGACCAACCGCAAGCGGGCGGTC
GGTGCGTGGTCGAAGCTCAAGGAGCGCCGCGACAACGAAGAGATGAGCTC
CTCCACGGACGAGAAGACCGGCAAGATGAAGTCAACATGA
back to top