prot_H-canaliculatus_F_contig1379.3018.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1379.3018.1
Unique Nameprot_H-canaliculatus_F_contig1379.3018.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length222
Homology
BLAST of mRNA_H-canaliculatus_F_contig1379.3018.1 vs. uniprot
Match: D8LSZ0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSZ0_ECTSI)

HSP 1 Score: 300 bits (768), Expect = 8.200e-101
Identity = 160/219 (73.06%), Postives = 183/219 (83.56%), Query Frame = 0
Query:    3 RSVGEMKDIINNELTSIYDRTEGEDDIREVLELENAMETECRRRETDARTLIRDAIERLDQQKQAIVEPSERAFVAKVRGIEQHRTQAASHIQEQAEEAAARERDIERMQVAVEETQEEIENTVDAHIMEMPRVQNSIGLYANVTRIKWNYETEGDITAGWLLPPGEGTGGKQTGGDGGAGPLAVIEGFQFDAAGKDDFEVANKLWDIIDGKARAMVEA 221
            R++ EM+DI+NN++  IYDRT G DD+REVLELE AME EC RRE DAR +IRD I+ L+Q+ +AIVEPSE+AFVA++R +E  R QAASHIQEQAEEAAARERDIERMQ  VE+TQ EIENTVDAH MEMPRVQN+IGLY N+TRIKWNYETEG+I AGWL+PP  G G K      GA   AV+EGFQFDAAGKDDFEVANKLWD+IDGKARAMVEA
Sbjct:    7 RTLEEMRDIVNNDMPQIYDRTAGVDDVREVLELEAAMEMECERREMDARAMIRDTIDVLEQRHRAIVEPSEQAFVARIRVVEHERAQAASHIQEQAEEAAARERDIERMQGEVEDTQTEIENTVDAHTMEMPRVQNAIGLYTNITRIKWNYETEGEIMAGWLVPPEAGVGMK------GANGTAVVEGFQFDAAGKDDFEVANKLWDVIDGKARAMVEA 219          
BLAST of mRNA_H-canaliculatus_F_contig1379.3018.1 vs. uniprot
Match: A0A835YM15_9STRA (Kinetochore protein Spc24 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YM15_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 7.540e-7
Identity = 44/199 (22.11%), Postives = 87/199 (43.72%), Query Frame = 0
Query:   15 ELTSIYDRTEGEDDIREVLELENAMETECRRRETDARTLIRDAIERLDQQKQAIVEPSERAFVAKVRGIEQHRTQAASHIQEQAEEAAARERDIERMQVAVEETQEEIENTVDAHIMEMPRVQNSIGLYANVTRIKWNYETEGDITAGWLLPPGEGTGGKQTGGDGGAGPLAVIEGFQFDAAGKDDFEVANKLWDIIDG 213
            EL S+++       I  +  LE  + + C  + T A+ +I+   ER+D  ++    P        +  +   ++++ S I     + A  E ++     ++ + ++    +   +  E+P+++ +  LYAN+TR+KW++        G++  P                    +  F  D A  D F +AN+LWDIIDG
Sbjct:   29 ELQSLHEDPSDAQSINSIRGLEAELRSMCLIKSTQAKDIIKAFTERVDTLERTSAPPDTEGHARTMDDLATAKSESESEITRLHSKLAETEAEVSETTESLGKVKKLAATSAREYWAELPQLKYANTLYANITRVKWDFTAPDGQLVGFVTQP----------------HTETVTSFSIDTAKGDRFAIANQLWDIIDG 211          
BLAST of mRNA_H-canaliculatus_F_contig1379.3018.1 vs. uniprot
Match: A0A7S1YQV0_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1YQV0_9STRA)

HSP 1 Score: 56.6 bits (135), Expect = 4.780e-6
Identity = 32/100 (32.00%), Postives = 53/100 (53.00%), Query Frame = 0
Query:  120 EEIENTVDAHIMEMPRVQNSIGLYANVTRIKWNYETEGDITAGWLLPPGEGTGGKQTGGDGGAGPLAVIEGFQFDAAGKDDFEVANKLWDIIDGKARAMV 219
            E+I+    A I E+PR++  + LYA +T IKW+YE E ++ AG +    +G                +   F+ D     +F+VAN +W ++DGK+ A+V
Sbjct:  180 EKIDEVEAAKIKEVPRMKKQLSLYAAMTNIKWHYEKE-NVMAGEVAVLSQG----------------ICRRFEIDPMEHSEFDVANAVWSLMDGKSSAVV 262          
BLAST of mRNA_H-canaliculatus_F_contig1379.3018.1 vs. uniprot
Match: A0A7S3PP82_9STRA (Kinetochore protein Spc24 n=2 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PP82_9STRA)

HSP 1 Score: 53.5 bits (127), Expect = 3.220e-5
Identity = 49/208 (23.56%), Postives = 93/208 (44.71%), Query Frame = 0
Query:   12 INNELTSIYDRTEGEDDIREVLELENAMETECRRRETDARTLIRDAIERLDQQKQAIVE--------PSERAFVAKVRGIEQHRTQAASHIQEQAEEAAARERDIERMQVAVEETQEEIENTVDAHIMEMPRVQNSIGLYANVTRIKWNYETEGDITAGWLLPPGEGTGGKQTGGDGGAGPLAVIEGFQFDAAGKDDFEVANKLWDII 211
            I  +L  +Y + +  + + E ++L +++           + LIR+  + +D  KQ   E        P      +K++   +  T+   H ++   E  A E+ +E +Q+     QEE+E    A +   P +Q+ + LYAN+T+IKW++ +E   +   ++   EG G              V+  F +       FE+AN +WD+I
Sbjct:   13 ILQDLEELYQQNQDAERVGECIQLRDSITATYSEATDSVQDLIRNFSKEVDVLKQKAEELAGQPSSNPEIEELKSKIKQCGERYTEQQHHEKDIEAEVEALEKKMESLQLE----QEELEKKAAASV---PLMQHLLSLYANITKIKWDFSSE---SVAGVVSDAEGKG--------------VVRQFDYSLENHTSFELANNIWDVI 196          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1379.3018.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LSZ0_ECTSI8.200e-10173.06Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YM15_9STRA7.540e-722.11Kinetochore protein Spc24 n=1 Tax=Tribonema minus ... [more]
A0A7S1YQV0_9STRA4.780e-632.00Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S3PP82_9STRA3.220e-523.56Kinetochore protein Spc24 n=2 Tax=Aplanochytrium s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 94..128

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1379contigH-canaliculatus_F_contig1379:9519..12845 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1379.3018.1mRNA_H-canaliculatus_F_contig1379.3018.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1379 9519..13004 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1379.3018.1 ID=prot_H-canaliculatus_F_contig1379.3018.1|Name=mRNA_H-canaliculatus_F_contig1379.3018.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=222bp
MARSVGEMKDIINNELTSIYDRTEGEDDIREVLELENAMETECRRRETDA
RTLIRDAIERLDQQKQAIVEPSERAFVAKVRGIEQHRTQAASHIQEQAEE
AAARERDIERMQVAVEETQEEIENTVDAHIMEMPRVQNSIGLYANVTRIK
WNYETEGDITAGWLLPPGEGTGGKQTGGDGGAGPLAVIEGFQFDAAGKDD
FEVANKLWDIIDGKARAMVEA*
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