prot_H-canaliculatus_F_contig13784.3015.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig13784.3015.1
Unique Nameprot_H-canaliculatus_F_contig13784.3015.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length167
Homology
[Close]
BLAST of mRNA_H-canaliculatus_F_contig13784.3015.1 vs. uniprot
Match: D8LRB4_ECTSI (Cell surface protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRB4_ECTSI)

HSP 1 Score: 61.6 bits (148), Expect = 5.340e-8
Identity = 39/76 (51.32%), Postives = 46/76 (60.53%), Query Frame = 0 
Query:   21 FVGGGHALCRARSRSGNGPVSDMFFLDA-DPPAP---------------PQLIP--RRSRLPSRERALILEFVQEA 78
            FVGGGH LCRARS S  GPVSD+F L+A D PA                P L+   RR+R PSRERA++L+FV  A
Sbjct:  260 FVGGGHVLCRARSSSATGPVSDIFHLEAADTPAAAGAAXXXXXXXXXXXPTLLRKHRRARFPSRERAVLLDFVPAA 335
[Close]
BLAST of mRNA_H-canaliculatus_F_contig13784.3015.1 vs. uniprot
Match: A0A6H5J8H8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8H8_9PHAE)

HSP 1 Score: 59.7 bits (143), Expect = 2.610e-7
Identity = 36/75 (48.00%), Postives = 44/75 (58.67%), Query Frame = 0 
Query:   21 FVGGGHALCRARSRSGNGPVSDMFFLDAD---------------PPAPPQLIP--RRSRLPSRERALILEFVQEA 78
            FVGGGH LCR RS S  GPVSD+F L+A                P A P L+   RR+R PSRER+++L+FV  A
Sbjct:  756 FVGGGHVLCRTRSSSAPGPVSDIFHLEAADTPAATGAAAAAPEAPAAAPTLLRNHRRARFPSRERSVLLDFVPAA 830
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig13784.3015.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LRB4_ECTSI5.340e-851.32Cell surface protein n=1 Tax=Ectocarpus siliculosu... [more]
A0A6H5J8H8_9PHAE2.610e-748.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig13784contigH-canaliculatus_F_contig13784:136..1116 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig13784.3015.1mRNA_H-canaliculatus_F_contig13784.3015.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig13784 136..1121 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig13784.3015.1 ID=prot_H-canaliculatus_F_contig13784.3015.1|Name=mRNA_H-canaliculatus_F_contig13784.3015.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=167bp
MGGGGGAGAGPGGFTDGAGDFVGGGHALCRARSRSGNGPVSDMFFLDADP
PAPPQLIPRRSRLPSRERALILEFVQEASGPAVPESSAAAAAAAASAAML
SSAQASGTESSAPSTPTGGHLFGGARRSSSSRRFGSNRRERFQPSGSGGG
GGGGGVGNIGYSRSGSF
back to top