mRNA_H-canaliculatus_F_contig13772.3008.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig13772.3008.1 vs. uniprot
Match: D7G265_ECTSI (Ammonium transporter n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G265_ECTSI) HSP 1 Score: 305 bits (780), Expect = 9.110e-100 Identity = 148/186 (79.57%), Postives = 168/186 (90.32%), Query Frame = 1
Query: 1 PIVAHWAWSEGGWASARAADEGELLFGCGATDFAGSGVVHMTGGMAALVGIFILGPRAGRFNEDGTSNTMPQQSAVLQSLGTFILWWGWLGFNAGSVPSFVAMPAVAAKVMGVTVIGGSAGGISSVLLSRLQSGYWDTGSATNGILVGLVSVTAGCPTFEPEAGFVVGAIGGLVYVASSGFLLKIH 558
PIVAHWAWS+GGWASAR AD+ +LLFGCG TDFAGSGVVHMTGGMAAL+GIFILGPRAGRFNEDGTSNTMPQQSAVLQ+LGTF+LWWGWLGFNAGSV SFVA PAVAAKVMGVTVIGG++GGI+S+L+++LQ GYWDTGSA NGIL GLVS+TAG T+EPE FVVG +GG++Y +S LL+ H
Sbjct: 150 PIVAHWAWSDGGWASARLADDDDLLFGCGVTDFAGSGVVHMTGGMAALMGIFILGPRAGRFNEDGTSNTMPQQSAVLQTLGTFMLWWGWLGFNAGSVSSFVATPAVAAKVMGVTVIGGASGGITSLLVNKLQCGYWDTGSALNGILTGLVSITAGSGTYEPEGAFVVGVLGGVLYFFASNLLLRNH 335
BLAST of mRNA_H-canaliculatus_F_contig13772.3008.1 vs. uniprot
Match: A0A6H5J7X8_9PHAE (Ammonium transporter n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7X8_9PHAE) HSP 1 Score: 296 bits (758), Expect = 1.750e-96 Identity = 144/186 (77.42%), Postives = 164/186 (88.17%), Query Frame = 1
Query: 1 PIVAHWAWSEGGWASARAADEGELLFGCGATDFAGSGVVHMTGGMAALVGIFILGPRAGRFNEDGTSNTMPQQSAVLQSLGTFILWWGWLGFNAGSVPSFVAMPAVAAKVMGVTVIGGSAGGISSVLLSRLQSGYWDTGSATNGILVGLVSVTAGCPTFEPEAGFVVGAIGGLVYVASSGFLLKIH 558
PIVAHWAWS+GGWASAR AD+ +LLFGCGA + AGSGVVHMTGGMAAL GIFILGPRAGRFNEDG+SNTMPQQSAVLQ+LGTFILWWGWLGFN GS+PSFV+MPAVAA+VM VTVI G++GGISS++ ++ GYWDTGSA NGIL GLVSVTAG T+EPE FVVG IGG++YV +S LLK+H
Sbjct: 150 PIVAHWAWSDGGWASARLADDDDLLFGCGAIELAGSGVVHMTGGMAALTGIFILGPRAGRFNEDGSSNTMPQQSAVLQTLGTFILWWGWLGFNGGSLPSFVSMPAVAARVMAVTVISGASGGISSLVANKRLCGYWDTGSALNGILAGLVSVTAGAATYEPEGAFVVGLIGGMLYVFASALLLKLH 335
BLAST of mRNA_H-canaliculatus_F_contig13772.3008.1 vs. uniprot
Match: D7FR22_ECTSI (Ammonium transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR22_ECTSI) HSP 1 Score: 213 bits (543), Expect = 3.230e-64 Identity = 109/187 (58.29%), Postives = 130/187 (69.52%), Query Frame = 1
Query: 1 PIVAHWAWSEGGWASARAADEGELLFGCGATDFAGSGVVHMTGGMAALVGIFILGPRAGRFNEDGTSNTMPQQSAVLQSLGTFILWWGWLGFNAGSVPSFVAMPAVAAKVMGVTVIGGSAGGISSVLLSRLQSGYWDTGSATNGILVGLVSVTAGCPTFEPEAGFVVGAIGGLVYVASSGFLLKIHV 561
P+V HW W+ GGWASA E +LLFGCG DFAGSGVVHMTGG+AAL ++GPR GRFNEDGT+NT+PQQSAVLQSLGT ILW+GW GFN S V VAAK M T I + G +++VLL + G+WD G+A NG+L GLV VTAGC T EPE V+G I G VY SS L+ + +
Sbjct: 164 PVVVHWGWA-GGWASAWR--ETDLLFGCGVIDFAGSGVVHMTGGLAALCAAIVVGPRTGRFNEDGTANTLPQQSAVLQSLGTLILWFGWYGFNGVSTLYIVGFAGVAAKTMVTTTISAAFGAVTTVLLGKFNLGHWDGGAANNGLLAGLVGVTAGCSTCEPEGAMVIGIISGFVYTYSSKMLVMLKI 347
BLAST of mRNA_H-canaliculatus_F_contig13772.3008.1 vs. uniprot
Match: D7G243_ECTSI (Ammonium transporter n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G243_ECTSI) HSP 1 Score: 199 bits (507), Expect = 8.320e-59 Identity = 105/187 (56.15%), Postives = 127/187 (67.91%), Query Frame = 1
Query: 1 PIVAHWAWSEGGWASARAADEGELLFGCGATDFAGSGVVHMTGGMAALVGIFILGPRAGRFNEDGTSNTMPQQSAVLQSLGTFILWWGWLGFNAGSVPSFVAMPAVAAKVMGVTVIGGSAGGISSVLLSRLQSGYWDTGSATNGILVGLVSVTAGCPTFEPEAGFVVGAIGGLVYVASSGFLLKIHV 561
P+V HW W GGWASA DE +LLF CG DFAGSGVVHMTGG+AAL ++GPR GRFNEDGT+NT+PQQSAVLQ+LGT ILW+G S + + VAAK M T I + G +++VLL +L GYWD G+A NG+L GLV VTAGC T EPE V+G I G VY SS L+ + +
Sbjct: 168 PVVVHWGWG-GGWASAWV-DE-DLLFDCGVIDFAGSGVVHMTGGLAALAAAIVVGPRTGRFNEDGTANTLPQQSAVLQTLGTLILWFGXXXXXXVSTLAINGLAGVAAKTMVTTTISAAFGAVTTVLLGKLNLGYWDAGAANNGLLAGLVGVTAGCSTCEPEGAMVIGIISGFVYTYSSKMLVMLKI 351
BLAST of mRNA_H-canaliculatus_F_contig13772.3008.1 vs. uniprot
Match: A0A7S1UFZ4_9STRA (Ammonium transporter n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UFZ4_9STRA) HSP 1 Score: 177 bits (449), Expect = 5.750e-50 Identity = 92/187 (49.20%), Postives = 119/187 (63.64%), Query Frame = 1
Query: 1 PIVAHWAWSEGGWASARAADEGELLFGCGATDFAGSGVVHMTGGMAALVGIFILGPRAGRFNEDGTSNTMPQQSAVLQSLGTFILWWGWLGFNAGSVPSFVAMPAVAAKVMGVTVIGGSAGGISSVLLSRLQSGYWDTGSATNGILVGLVSVTAGCPTFEPEAGFVVGAIGGLVYVASSGFLLKIHV 561
P+VA W W+ G SA + D+ ++LFGCGA DFAGSGVVHMTGG+AAL G GPR GRF +G N++P+Q+ + +LGTFILW GW GFN S VAAKVM V+ IG +A G SSV+ + D G+A NG+L GLVS+T C EP F++G IGG+VY S+ L + +
Sbjct: 172 PVVACWGWNGDGAFSAWSGDKDDVLFGCGAVDFAGSGVVHMTGGVAALSGAIWAGPRNGRFGPNGEVNSLPEQNPIFAALGTFILWVGWYGFNGASTLYITHYSGVAAKVMVVSTIGAAAAGFSSVIFHKFMHNTVDLGAALNGVLGGLVSITGACAVIEPYGAFIIGLIGGVVYQLSAMLLESLKI 358
BLAST of mRNA_H-canaliculatus_F_contig13772.3008.1 vs. uniprot
Match: D7G3S7_ECTSI (Ammonium transporter n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3S7_ECTSI) HSP 1 Score: 177 bits (448), Expect = 7.210e-50 Identity = 98/187 (52.41%), Postives = 119/187 (63.64%), Query Frame = 1
Query: 1 PIVAHWAWSEGGWASARAADEGELLFGCGATDFAGSGVVHMTGGMAALVGIFILGPRAGRFNEDGTSNTMPQQSAVLQSLGTFILWWGWLGFNAGSVPSFVAMPAVAAKVMGVTVIGGSAGGISSVLLSRLQSGYWDTGSATNGILVGLVSVTAGCPTFEPEAGFVVGAIGGLVYVASSGFLLKIHV 561
P+V HW WS GGWASA E ELL CG DFAGSGVVHMTGG AALVG +LGPR+GRF DG +PQ S V Q+LGT LW GW GFN S + V + VAA+ M T I G ++SV ++ + GY D +A NG+L GLV++TAGC PE V+G + G VY ASS LLK+ +
Sbjct: 165 PVVVHWGWSAGGWASAWR--ETELLMDCGVLDFAGSGVVHMTGGTAALVGAVLLGPRSGRFI-DGIPVELPQLSFVYQTLGTLCLWMGWYGFNGVSTLAIVGLGEVAARAMVNTTIAGGVACVTSVTVAYFRIGYVDITAANNGVLGGLVAITAGCSVVMPEGAVVIGFVAGFVYNASSVLLLKLQI 348
BLAST of mRNA_H-canaliculatus_F_contig13772.3008.1 vs. uniprot
Match: A0A6V1QTK2_HETAK (Ammonium transporter n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1QTK2_HETAK) HSP 1 Score: 175 bits (443), Expect = 2.570e-49 Identity = 96/187 (51.34%), Postives = 119/187 (63.64%), Query Frame = 1
Query: 1 PIVAHWAWSEGGWASARAADEGELLFGCGATDFAGSGVVHMTGGMAALVGIFILGPRAGRFNEDGTSNTMPQQSAVLQSLGTFILWWGWLGFNAGSVPSFVAMPAVAAKVMGVTVIGGSAGGISSVLLSRLQSGYWDTGSATNGILVGLVSVTAGCPTFEPEAGFVVGAIGGLVYVASSGFLLKIHV 561
P V HW W+ GWASA E +LLFGCG DFAGSGVVH TGG+ AL G ILGPR GRF +G + S + Q+LGT ILW+GW GFN S A AA+ M + I AG ISSVLL++L +G D G+A NGIL GLVS+TA C +PE FV+G IGG++Y S+ LL++ +
Sbjct: 167 PCVVHWGWNANGWASAWR--EEDLLFGCGVLDFAGSGVVHTTGGVVALWGAKILGPRTGRFI-NGQKQEFKEVSPIYQTLGTLILWFGWYGFNGASTLYIGGYSAPAARAMVTSTISAGAGCISSVLLAKLHTGIIDPGAANNGILGGLVSITASCSVVDPEGAFVIGLIGGVIYYFSALLLLRLQI 350
BLAST of mRNA_H-canaliculatus_F_contig13772.3008.1 vs. uniprot
Match: A0A7S3EK75_9RHOD (Ammonium transporter n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EK75_9RHOD) HSP 1 Score: 169 bits (428), Expect = 5.720e-48 Identity = 96/195 (49.23%), Postives = 121/195 (62.05%), Query Frame = 1
Query: 1 PIVAHWAWSEGGWASARAADEGELLFGCGATDFAGSGVVHMTGGMAALVGIFILGPRAGRFNEDGTSNTMPQQSAVLQSLGTFILWWGWLGFNAGSV--PSFVA-----MPAVAAKVMGV-TVIGGSAGGISSVLLSRLQSGYWDTGSATNGILVGLVSVTAGCPTFEPEAGFVVGAIGGLVYVASSGFLLKIHV 561
P+VAHW WS GW SA D LFG G DFAGS VVH+ GG A L+G I+GPR GRF+EDG MP SA L +LG F+LW+GW GFN GS +FV M + +V+ T + +AGGI+ ++L RL+ G +D S+ NGIL GLVS+TAGC EP F +G IGG +YV SS LL + +
Sbjct: 158 PVVAHWIWSPSGWLSAENEDP---LFGVGVFDFAGSTVVHVVGGFAGLMGAIIVGPRLGRFDEDGRVTPMPGHSATLVTLGGFLLWFGWYGFNTGSAGAATFVIDDPELMGSTVIQVVAANTTVAAAAGGITVLVLVRLRDGLFDLISSLNGILAGLVSITAGCAVVEPYGAFTIGLIGGTIYVLSSWTLLLMRI 349
BLAST of mRNA_H-canaliculatus_F_contig13772.3008.1 vs. uniprot
Match: A0A024UCR2_9STRA (Ammonium transporter n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UCR2_9STRA) HSP 1 Score: 170 bits (431), Expect = 5.810e-47 Identity = 91/189 (48.15%), Postives = 116/189 (61.38%), Query Frame = 1
Query: 1 PIVAHWAWSEGGWASARAADEGELLFGCGATDFAGSGVVHMTGGMAALVGIFILGPRAGRFNEDGTSNTMPQQSAVLQSLGTFILWWGWLGFNAGSVPSFVA-MPAVAAKVMGVTVIGGSAGGISSVLLSRLQ-SGYWDTGSATNGILVGLVSVTAGCPTFEPEAGFVVGAIGGLVYVASSGFLLKIHV 561
P+ AHW WS GWAS A LLFG GA DFAG G +HM GGM+ALVG ++GPRAGRFN DGT+N MP+QS + Q +GT +LW+GW GFN S S M V AKV + GG+ +VLL +L S WD NGIL G VS+T C EPE +GAI ++Y++ S ++K+ +
Sbjct: 181 PVAAHWIWSPTGWASVLAPTS-SLLFGVGAIDFAGCGCIHMIGGMSALVGCLVVGPRAGRFNADGTANEMPKQSVMFQCMGTLVLWFGWYGFNCVSTLSLTGTMGHVMAKVAVNLTLAACTGGVLTVLLDKLAGSRTWDPCMGNNGILAGCVSITGSCSVIEPEGAVALGAIAAVLYLSLSKLVVKLRI 368
BLAST of mRNA_H-canaliculatus_F_contig13772.3008.1 vs. uniprot
Match: A0A835ZB85_9STRA (Ammonium transporter n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB85_9STRA) HSP 1 Score: 169 bits (428), Expect = 7.130e-47 Identity = 90/187 (48.13%), Postives = 119/187 (63.64%), Query Frame = 1
Query: 1 PIVAHWAWSEGGWASARAADEGELLFGCGATDFAGSGVVHMTGGMAALVGIFILGPRAGRFNEDGTSNTMPQQSAVLQSLGTFILWWGWLGFNAGSVPSFVAMPAVAAKVMGVTVIGGSAGGISSVLLSRLQSGYWDTGSATNGILVGLVSVTAGCPTFEPEAGFVVGAIGGLVYVASSGFLLKIHV 561
PIV H W+ GGW SA D LL CG DFAGSGVVHMTGG+AALVG ++GPR GRF +G +PQ S V Q++GT LW+GW GFN S V VAAK M + + G+ GG+SS L++++ G+ D +A NGIL G V++TAG +PE ++G I G++Y A+S LLK+ +
Sbjct: 172 PIVVHMTWNSGGWMSAFRQDH--LLSRCGVVDFAGSGVVHMTGGVAALVGAVMVGPRFGRFGPNGEVRALPQLSWVYQAIGTLFLWFGWYGFNGVSSLYIVGKGLVAAKTMINSTLSGAIGGLSSTLVAQVLDGFIDPAAANNGILSGFVAITAGSGVAQPEGAILIGFIAGIIYQATSKLLLKLRI 356 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig13772.3008.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig13772.3008.1 >prot_H-canaliculatus_F_contig13772.3008.1 ID=prot_H-canaliculatus_F_contig13772.3008.1|Name=mRNA_H-canaliculatus_F_contig13772.3008.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=187bp PIVAHWAWSEGGWASARAADEGELLFGCGATDFAGSGVVHMTGGMAALVGback to top mRNA from alignment at H-canaliculatus_F_contig13772:341..2022+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig13772.3008.1 ID=mRNA_H-canaliculatus_F_contig13772.3008.1|Name=mRNA_H-canaliculatus_F_contig13772.3008.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=1682bp|location=Sequence derived from alignment at H-canaliculatus_F_contig13772:341..2022+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig13772:341..2022+ >mRNA_H-canaliculatus_F_contig13772.3008.1 ID=mRNA_H-canaliculatus_F_contig13772.3008.1|Name=mRNA_H-canaliculatus_F_contig13772.3008.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1122bp|location=Sequence derived from alignment at H-canaliculatus_F_contig13772:341..2022+ (Hapterophycus canaliculatus Oshoro5f female)back to top |