prot_H-canaliculatus_F_contig1377.3006.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1377.3006.1
Unique Nameprot_H-canaliculatus_F_contig1377.3006.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length885
Homology
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BLAST of mRNA_H-canaliculatus_F_contig1377.3006.1 vs. uniprot
Match: D7G8T9_ECTSI (DUF4211 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8T9_ECTSI)

HSP 1 Score: 302 bits (773), Expect = 4.110e-86
Identity = 217/325 (66.77%), Postives = 240/325 (73.85%), Query Frame = 0 
Query:  566 GVVEAAPAVATPRRSGRTRRKSSMINYREMLDGGGVSASDESEKGANGGAGEEEGDSSGWEGDDGQGGEQSDEELKGKAKLEGCGRDEDADEDDGFAETLQEDEXXXXXXXXXXXXXXXEVRRKGKRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----VFFSHAAFFHEMEQSQDGGVHSLSVGTMTFKEAFLFYIEYIAKATEGGGAGKAFMKKYVAQPRLPEHARYGKAKETVEKKLRISGESLCGTWRQEFRDTIMRYPHYGYQHVSGDECGLTDRCSACNRSNRTKVVAFLSGADYDPNRV 885
            G+ E APA AT R + RTRR+SSM+NYREML G G S+                   SGW+ DD    ++SD EL GK   + C RDED DEDD FA TL++DE XXXXXXXXXXXXXX         XXXXXXXXXXXXXXXXXX                  XXXXXXXXX      FFSHAAFF+EMEQS+DGG+ SLSVGTMTFKEAFLFY+EYIAKAT+G GAG+AFMKKYVAQPR+PEHARYGKAKE VEKKLRISGESLCG+WRQ+FRDTIMRYPHYGY HV GD C LTDRCSACNRSNRT V+AFLSG++YDPNRV
Sbjct:  489 GIKEEAPAAATGRAT-RTRRRSSMVNYREMLHGKGTSSXXXXXXXXXXXXXXXX---SGWDNDDE---DESDGELDGKKSGDKCARDEDIDEDDSFAVTLKDDEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRNHRYNEPDDGDEDNFIDXXXXXXXXXXXXXDAFFSHAAFFNEMEQSEDGGISSLSVGTMTFKEAFLFYVEYIAKATQGDGAGEAFMKKYVAQPRIPEHARYGKAKEMVEKKLRISGESLCGSWRQDFRDTIMRYPHYGYHHVDGDLCRLTDRCSACNRSNRTSVIAFLSGSEYDPNRV 806
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BLAST of mRNA_H-canaliculatus_F_contig1377.3006.1 vs. uniprot
Match: A0A6H5KKK5_9PHAE (DUF4211 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKK5_9PHAE)

HSP 1 Score: 272 bits (696), Expect = 3.250e-74
Identity = 126/146 (86.30%), Postives = 137/146 (93.84%), Query Frame = 0 
Query:  740 FFSHAAFFHEMEQSQDGGVHSLSVGTMTFKEAFLFYIEYIAKATEGGGAGKAFMKKYVAQPRLPEHARYGKAKETVEKKLRISGESLCGTWRQEFRDTIMRYPHYGYQHVSGDECGLTDRCSACNRSNRTKVVAFLSGADYDPNRV 885
            FFSHAAFF+EMEQS+DGGV SLSVGTMTFKEAFLFY+EYIAKAT+G GAG+AFMKKYVAQPR+PEHARYGKAKE VEKKLRISGESLCG+WRQ+FRDTIMRYPHYGY HV GD C L DRCSACNRSNRT V+AFLSG++YDPNRV
Sbjct:  633 FFSHAAFFNEMEQSEDGGVSSLSVGTMTFKEAFLFYVEYIAKATQGDGAGEAFMKKYVAQPRIPEHARYGKAKEMVEKKLRISGESLCGSWRQDFRDTIMRYPHYGYHHVDGDLCRLNDRCSACNRSNRTSVIAFLSGSEYDPNRV 778
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BLAST of mRNA_H-canaliculatus_F_contig1377.3006.1 vs. uniprot
Match: D7FLB0_ECTSI (RNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLB0_ECTSI)

HSP 1 Score: 60.5 bits (145), Expect = 1.660e-5
Identity = 40/127 (31.50%), Postives = 63/127 (49.61%), Query Frame = 0 
Query:  775 YIEYIAKATEGGGAGKAFMKKYVAQPRLPEHA--RYGKAKETVEKKLRISGESLC--GTWRQEFRDTIMRYP----HYGYQH--------------VSGDECGLTDRCSACNRSNRTKV-VAFLSGA 878
            Y+E++AKA +GGG G AFM+K+ ++     HA   Y KA +  E ++    ES+   G+W QEF   +  YP    H+G  H              +  +  G  D C+AC+R  R  +   +L+G+
Sbjct:  940 YLEFLAKAVQGGGKGAAFMEKFDSK----RHAFTDYRKAIKNFEGRVCTIRESIAAGGSWNQEFMTAVTSYPFVGFHFGVSHEGPTEIDDEEEGQDIDWESLGRPDPCAACHRRQRENMSTMYLAGS 1062
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1377.3006.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G8T9_ECTSI4.110e-8666.77DUF4211 domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6H5KKK5_9PHAE3.250e-7486.30DUF4211 domain-containing protein n=1 Tax=Ectocarp... [more]
D7FLB0_ECTSI1.660e-531.50RNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 366..386
NoneNo IPR availableCOILSCoilCoilcoord: 543..567
NoneNo IPR availableCOILSCoilCoilcoord: 662..685
NoneNo IPR availableCOILSCoilCoilcoord: 227..254
IPR025451Domain of unknown function DUF4211PFAMPF13926DUF4211coord: 762..883
e-value: 1.1E-8
score: 35.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1377contigH-canaliculatus_F_contig1377:18329..27318 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1377.3006.1mRNA_H-canaliculatus_F_contig1377.3006.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1377 18284..27318 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1377.3006.1 ID=prot_H-canaliculatus_F_contig1377.3006.1|Name=mRNA_H-canaliculatus_F_contig1377.3006.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=885bp
MSAARRRRVMLESDDEDDQGGDEDLTTPRVTPPSGEQARPSKSRPKTIAA
GDDEDDDDDDVYDGLGDDEGEGGMHICGRYLAGAAASAGKKREDEAERKR
RRQLAERWSKLEEDSDHELSDGEGGSGGSGIAAAGRSALVQLRVQDAWRR
STPSRRRSASSRLFVQEPPPSGDEVGDSSDSDDGLGGFIVDDSRDDRRLE
EATDDDDSSGDGGSGSSSSSNSSGDEHRRAKTKREKKKKKKKKASKKKSK
AAEAAVAEVASASGTSRKSGKRRAGRKGAGSQEEEEEDDGIGALTQVGGG
GGGVKCRGAAAAAAAAAVVPGGRKKRGRGKPQPEEEEEAGGERAGRKRAR
RSRNADKKETAAVPGVAAAGGDVEEEEEEEEEEKEEDEVVARSGGRKKWK
TSKGGGPEEEPGSGSGGGGGAKRKNRVVSESESSSDDGDDGDSDDGEKDS
GSSSSSSGGGGGGGNDGDIGGRGKGVSVVEEPDLSRATTRSARKKINEKG
KGKGKGKRGGGAVPGTAINLASESEDGGEGGEITAASGMTPGAKEKKKRV
KKDKKKKEKEAEKKEGVVEAAPAVATPRRSGRTRRKSSMINYREMLDGGG
VSASDESEKGANGGAGEEEGDSSGWEGDDGQGGEQSDEELKGKAKLEGCG
RDEDADEDDGFAETLQEDEEEEEEEDSDAEDSDAEVRRKGKRAKRGKGET
GRGSKRKGRRRNRYDESDEEDDEEDVEDDDDDDGDEGDVFFSHAAFFHEM
EQSQDGGVHSLSVGTMTFKEAFLFYIEYIAKATEGGGAGKAFMKKYVAQP
RLPEHARYGKAKETVEKKLRISGESLCGTWRQEFRDTIMRYPHYGYQHVS
GDECGLTDRCSACNRSNRTKVVAFLSGADYDPNRV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR025451DUF4211