mRNA_H-canaliculatus_F_contig13758.2998.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig13758.2998.1 vs. uniprot
Match: D8LGU0_ECTSI (Polyribonucleotide nucleotidyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGU0_ECTSI) HSP 1 Score: 198 bits (503), Expect = 2.600e-57 Identity = 99/101 (98.02%), Postives = 100/101 (99.01%), Query Frame = 1
Query: 1 SDFSPLRVDYMERFSAAGMTSGGYNKRDGRASDKETLVSRLMDRPLRPAMHPGWFHETQLLSWVLSYDTVHPPVPLAITAASAALALSNVPLTRAIAGVTV 303
S+FSPLRVDYMERFSAAGMTSGGYNKRDGRASDKETLVSRLMDRPLRPAMHPGWFHETQLLSWVLSYDTVHPPVPLAITAASAALALSNVPL RAIAGVTV
Sbjct: 72 SNFSPLRVDYMERFSAAGMTSGGYNKRDGRASDKETLVSRLMDRPLRPAMHPGWFHETQLLSWVLSYDTVHPPVPLAITAASAALALSNVPLVRAIAGVTV 172
BLAST of mRNA_H-canaliculatus_F_contig13758.2998.1 vs. uniprot
Match: A0A835ZC49_9STRA (Polyribonucleotide nucleotidyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC49_9STRA) HSP 1 Score: 153 bits (387), Expect = 2.390e-41 Identity = 74/100 (74.00%), Postives = 87/100 (87.00%), Query Frame = 1
Query: 4 DFSPLRVDYMERFSAAGMTSGGYNKRDGRASDKETLVSRLMDRPLRPAMHPGWFHETQLLSWVLSYDTVHPPVPLAITAASAALALSNVPLTRAIAGVTV 303
DF+PL+VDY ERFS+AGMTSGGYNKRDGRAS+KE LVSRL+DRPLRP + GW HETQL++WV+SYD PP PLAIT+ASA+L LS VP+ RA+AGVTV
Sbjct: 16 DFAPLKVDYQERFSSAGMTSGGYNKRDGRASEKEVLVSRLIDRPLRPMIAQGWTHETQLITWVVSYDGSRPPEPLAITSASASLCLSQVPMRRAVAGVTV 115
BLAST of mRNA_H-canaliculatus_F_contig13758.2998.1 vs. uniprot
Match: A0A803LS92_CHEQI (Uncharacterized protein n=1 Tax=Chenopodium quinoa TaxID=63459 RepID=A0A803LS92_CHEQI) HSP 1 Score: 132 bits (333), Expect = 7.480e-36 Identity = 67/101 (66.34%), Postives = 79/101 (78.22%), Query Frame = 1
Query: 1 SDFSPLRVDYMERFSAAGMTSGGYNKRDGRASDKETLVSRLMDRPLRPAMHPGWFHETQLLSWVLSYDTVHPPVPLAITAASAALALSNVPLTRAIAGVTV 303
SDF PL V+Y ERFSAAG TSGG+ KR+GR D E LV RL+DRPLRP M G++HETQ+LSWVLSYD +HPP LA+TAA A+ALS +P T+ IAGV V
Sbjct: 133 SDFFPLSVNYQERFSAAGRTSGGFFKREGRPKDHEVLVCRLIDRPLRPTMVKGFYHETQVLSWVLSYDGLHPPDALAVTAAGIAVALSELPHTKTIAGVRV 233
BLAST of mRNA_H-canaliculatus_F_contig13758.2998.1 vs. uniprot
Match: UPI001F5FE2A8 (probable polyribonucleotide nucleotidyltransferase 1, chloroplastic n=1 Tax=Vigna umbellata TaxID=87088 RepID=UPI001F5FE2A8) HSP 1 Score: 131 bits (329), Expect = 1.100e-35 Identity = 65/101 (64.36%), Postives = 79/101 (78.22%), Query Frame = 1
Query: 1 SDFSPLRVDYMERFSAAGMTSGGYNKRDGRASDKETLVSRLMDRPLRPAMHPGWFHETQLLSWVLSYDTVHPPVPLAITAASAALALSNVPLTRAIAGVTV 303
SDF PL V Y ERFSAAG TSGG+ KR+G+ D E L+ RL+DRPLRP M G++HETQ+LSWVLSYD +H P LA+TAA A+ALS VP+++AIAGV V
Sbjct: 132 SDFFPLSVHYQERFSAAGRTSGGFFKREGKTRDHEVLICRLIDRPLRPTMPKGFYHETQILSWVLSYDGLHSPDSLAVTAAGIAVALSEVPMSKAIAGVRV 232
BLAST of mRNA_H-canaliculatus_F_contig13758.2998.1 vs. uniprot
Match: A0A1S4CDB9_TOBAC (polyribonucleotide nucleotidyltransferase 1, chloroplastic-like n=1 Tax=Nicotiana tabacum TaxID=4097 RepID=A0A1S4CDB9_TOBAC) HSP 1 Score: 131 bits (329), Expect = 2.700e-35 Identity = 65/99 (65.66%), Postives = 76/99 (76.77%), Query Frame = 1
Query: 1 SDFSPLRVDYMERFSAAGMTSGGYNKRDGRASDKETLVSRLMDRPLRPAMHPGWFHETQLLSWVLSYDTVHPPVPLAITAASAALALSNVPLTRAIAGV 297
SDF PL V Y ERFSAAG TSGG+ KR+GR D E L+ RL+DRPLRP M G++HETQ+LSWVLSYD +HPP LA+TAA A+ALS VP + IAGV
Sbjct: 139 SDFFPLSVHYQERFSAAGRTSGGFFKREGRTKDHEVLICRLIDRPLRPTMLKGFYHETQVLSWVLSYDGLHPPDALAVTAAGIAMALSEVPSSEVIAGV 237
BLAST of mRNA_H-canaliculatus_F_contig13758.2998.1 vs. uniprot
Match: A0A2P2LQQ5_RHIMU (Polyribonucleotide nucleotidyltransferase n=1 Tax=Rhizophora mucronata TaxID=61149 RepID=A0A2P2LQQ5_RHIMU) HSP 1 Score: 135 bits (340), Expect = 3.590e-35 Identity = 67/99 (67.68%), Postives = 79/99 (79.80%), Query Frame = 1
Query: 1 SDFSPLRVDYMERFSAAGMTSGGYNKRDGRASDKETLVSRLMDRPLRPAMHPGWFHETQLLSWVLSYDTVHPPVPLAITAASAALALSNVPLTRAIAGV 297
SDF PL V+Y ERFSAAG TSGG+ KR+GRA D E L+ RL+DRPLRP M G++HETQ+LSWVLSYD +HPP LA+TAA A+ALS VP T+ IAGV
Sbjct: 138 SDFFPLSVNYQERFSAAGRTSGGFFKREGRAKDHEVLICRLIDRPLRPTMLKGFYHETQILSWVLSYDGLHPPDALAVTAAGIAVALSEVPNTKVIAGV 236
BLAST of mRNA_H-canaliculatus_F_contig13758.2998.1 vs. uniprot
Match: A0A7J7KV96_9MAGN (Uncharacterized protein n=1 Tax=Kingdonia uniflora TaxID=39325 RepID=A0A7J7KV96_9MAGN) HSP 1 Score: 132 bits (333), Expect = 5.540e-35 Identity = 66/99 (66.67%), Postives = 79/99 (79.80%), Query Frame = 1
Query: 1 SDFSPLRVDYMERFSAAGMTSGGYNKRDGRASDKETLVSRLMDRPLRPAMHPGWFHETQLLSWVLSYDTVHPPVPLAITAASAALALSNVPLTRAIAGV 297
SDF PL V+Y ERFSAAG TSGG+ KR+GRA D E L+ RL+DRPLRP M G++HETQ+LSWVLSYD +H P LAITAA A+ALS VP T+++AGV
Sbjct: 107 SDFFPLSVNYQERFSAAGRTSGGFFKREGRAKDHEVLICRLIDRPLRPTMLKGFYHETQILSWVLSYDGLHSPDSLAITAAGIAVALSEVPNTKSVAGV 205
BLAST of mRNA_H-canaliculatus_F_contig13758.2998.1 vs. uniprot
Match: A0A2P2LQQ8_RHIMU (Polyribonucleotide nucleotidyltransferase n=5 Tax=Rhizophora mucronata TaxID=61149 RepID=A0A2P2LQQ8_RHIMU) HSP 1 Score: 135 bits (340), Expect = 7.860e-35 Identity = 67/99 (67.68%), Postives = 79/99 (79.80%), Query Frame = 1
Query: 1 SDFSPLRVDYMERFSAAGMTSGGYNKRDGRASDKETLVSRLMDRPLRPAMHPGWFHETQLLSWVLSYDTVHPPVPLAITAASAALALSNVPLTRAIAGV 297
SDF PL V+Y ERFSAAG TSGG+ KR+GRA D E L+ RL+DRPLRP M G++HETQ+LSWVLSYD +HPP LA+TAA A+ALS VP T+ IAGV
Sbjct: 138 SDFFPLSVNYQERFSAAGRTSGGFFKREGRAKDHEVLICRLIDRPLRPTMLKGFYHETQILSWVLSYDGLHPPDALAVTAAGIAVALSEVPNTKVIAGV 236
BLAST of mRNA_H-canaliculatus_F_contig13758.2998.1 vs. uniprot
Match: A0A1U8AHT2_NELNU (Polyribonucleotide nucleotidyltransferase n=2 Tax=Nelumbo nucifera TaxID=4432 RepID=A0A1U8AHT2_NELNU) HSP 1 Score: 135 bits (340), Expect = 7.870e-35 Identity = 68/101 (67.33%), Postives = 81/101 (80.20%), Query Frame = 1
Query: 1 SDFSPLRVDYMERFSAAGMTSGGYNKRDGRASDKETLVSRLMDRPLRPAMHPGWFHETQLLSWVLSYDTVHPPVPLAITAASAALALSNVPLTRAIAGVTV 303
SDF PL V+Y ERFSAAG TSGG+ KR+GRA D E L+ RL+DRPLRP M G++HETQ+LSWVLSYD +HPP LA+TAA A+ALS VP ++AIAGV V
Sbjct: 133 SDFFPLSVNYQERFSAAGRTSGGFFKREGRAKDHEVLICRLIDRPLRPTMPKGFYHETQILSWVLSYDGLHPPDCLAVTAAGIAVALSEVPNSKAIAGVRV 233
BLAST of mRNA_H-canaliculatus_F_contig13758.2998.1 vs. uniprot
Match: W7TFL5_9STRA (Polyribonucleotide nucleotidyltransferase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TFL5_9STRA) HSP 1 Score: 135 bits (339), Expect = 8.010e-35 Identity = 67/100 (67.00%), Postives = 79/100 (79.00%), Query Frame = 1
Query: 4 DFSPLRVDYMERFSAAGMTSGGYNKRDGRASDKETLVSRLMDRPLRPAMHPGWFHETQLLSWVLSYDTVHPPVPLAITAASAALALSNVPLTRAIAGVTV 303
DF+PLR+DY ERFSAAGMTSG Y KRDGRASD+E LV+RL+DRPLRP + W ETQ+LSWV SYD VH P+AI AASAA+ LS++PL +AGV V
Sbjct: 127 DFTPLRIDYFERFSAAGMTSGSYTKRDGRASDREILVARLIDRPLRPMLTEAWTCETQVLSWVFSYDGVHNSEPMAICAASAAVVLSSIPLETPVAGVQV 226 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig13758.2998.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig13758.2998.1 >prot_H-canaliculatus_F_contig13758.2998.1 ID=prot_H-canaliculatus_F_contig13758.2998.1|Name=mRNA_H-canaliculatus_F_contig13758.2998.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=91bp MERFSAAGMTSGGYNKRDGRASDKETLVSRLMDRPLRPAMHPGWFHETQLback to top mRNA from alignment at H-canaliculatus_F_contig13758:1776..2921- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig13758.2998.1 ID=mRNA_H-canaliculatus_F_contig13758.2998.1|Name=mRNA_H-canaliculatus_F_contig13758.2998.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=1146bp|location=Sequence derived from alignment at H-canaliculatus_F_contig13758:1776..2921- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig13758:1776..2921- >mRNA_H-canaliculatus_F_contig13758.2998.1 ID=mRNA_H-canaliculatus_F_contig13758.2998.1|Name=mRNA_H-canaliculatus_F_contig13758.2998.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=546bp|location=Sequence derived from alignment at H-canaliculatus_F_contig13758:1776..2921- (Hapterophycus canaliculatus Oshoro5f female)back to top |