prot_H-canaliculatus_F_contig13750.2995.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig13750.2995.1
Unique Nameprot_H-canaliculatus_F_contig13750.2995.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length387
Homology
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BLAST of mRNA_H-canaliculatus_F_contig13750.2995.1 vs. uniprot
Match: D8LMW1_ECTSI (VASt domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMW1_ECTSI)

HSP 1 Score: 161 bits (407), Expect = 8.760e-40
Identity = 94/157 (59.87%), Postives = 102/157 (64.97%), Query Frame = 0 
Query:  246 KAGQGRRSSKLWNMMRWDGGVQAGEE-----DAEADRKAMEKAIAAGGNNHAEVATAEFDVSVKEFYERFVADDAPYGLPEFHMSRGDWEASSFFCFLSVDAGEWQQXXXXXXXXXXXXXXXXXXKTKGG----------GEGGVTRAIRFKTPLHV 387
            KAG  R+ SKLWNMMRWD G +AG       D EADRKAME+AI+AGG++HAEVATAEFDVSVKEFYERFVADDAPY LP+FHMSRGDWE         VDAGEWQ                    TKG           G GGVTRAIRFKTPLH+
Sbjct:  546 KAGLVRQGSKLWNMMRWDSGGRAGGAGDGGVDPEADRKAMEEAISAGGDSHAEVATAEFDVSVKEFYERFVADDAPYSLPDFHMSRGDWE---------VDAGEWQHTTKEGEGGGGAAG-----STKGDXXXLRGPRPPGGGGVTRAIRFKTPLHI 688
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BLAST of mRNA_H-canaliculatus_F_contig13750.2995.1 vs. uniprot
Match: A0A6H5KHE3_9PHAE (VASt domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHE3_9PHAE)

HSP 1 Score: 152 bits (383), Expect = 1.310e-36
Identity = 92/167 (55.09%), Postives = 100/167 (59.88%), Query Frame = 0 
Query:  246 KAGQGRRSSKLWNMMRWDGGVQAGEE-----DAEADRKAMEKAIAAGGNNHAEVATAEFDVSVKEFYERFVADDAPYGLPEFHMSRGDWEASSFFCFLSVDAGEWQQXXXXXXXXXXXXXXXXXXKTKGGGEGG--------------------VTRAIRFKTPLHV 387
            KAG  R+ SKLWNMMRWD G +AG       D EADRKAME+AI+AGG++HAEVATAEFDVSVKEFYERFVADDAPY LP+FHMSRGDWE         VDA EWQQ                     GGG  G                    VTRAIRFKTPLH+
Sbjct:  540 KAGLVRQGSKLWNMMRWDSGGRAGGAGEGGGDPEADRKAMEEAISAGGDSHAEVATAEFDVSVKEFYERFVADDAPYSLPDFHMSRGDWE---------VDASEWQQTTEEGEG--------------GGGATGSTKXXXXXXXXXXXXXXXXXVTRAIRFKTPLHI 683
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig13750.2995.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LMW1_ECTSI8.760e-4059.87VASt domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5KHE3_9PHAE1.310e-3655.09VASt domain-containing protein n=1 Tax=Ectocarpus ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR14445GRB10 INTERACTING GYF PROTEINcoord: 103..357
NoneNo IPR availablePANTHERPTHR14445:SF41coord: 103..357

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig13750contigH-canaliculatus_F_contig13750:191..2798 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig13750.2995.1mRNA_H-canaliculatus_F_contig13750.2995.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig13750 191..2798 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig13750.2995.1 ID=prot_H-canaliculatus_F_contig13750.2995.1|Name=mRNA_H-canaliculatus_F_contig13750.2995.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=387bp
STPPPPNRARDARTGGMGGLSSSLPSSPNAAAAAAAAAAAASCFSPSSSP
ITAAARGRSYSMTPASSGNTMARAATTSGAVPPRPTKLGLAFLGPEHDAP
SPPPLPLPPYLHANGGGSIHGHHHQPRQQQQQQQRQQRQRPSPQITAVIT
GAGQAGWGTPEPSYPGLASPDRRGGGGSSSLVAGCAAAAAEESGAISATA
PPLTGGKDTPASGRTENKDGPRQDTREETTEQQQQQQQQRADSAHKAGQG
RRSSKLWNMMRWDGGVQAGEEDAEADRKAMEKAIAAGGNNHAEVATAEFD
VSVKEFYERFVADDAPYGLPEFHMSRGDWEASSFFCFLSVDAGEWQQQQQ
QQQQPTTDAEGEAAAKTKGGGEGGVTRAIRFKTPLHV
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