mRNA_H-canaliculatus_F_contig1375.2993.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
|
Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig1375.2993.1 vs. uniprot
Match: D7FQH7_ECTSI (Cellulose synthase (UDP-forming), family GT2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQH7_ECTSI) HSP 1 Score: 185 bits (469), Expect = 2.120e-52 Identity = 85/115 (73.91%), Postives = 102/115 (88.70%), Query Frame = 1
Query: 1 KDDVRDLAESFGFRYIRRDDRPAMKKAGNLRYAFARTTGEAVVIFDADFCPRADFLRETTPYLLNPVIGILQTPQYFRFRKEQTWVEQGAGSCQEFFYRMVQMNQDRFNGAVCVG 345
KD+V+ LA +GF+YIRRD+RP +KKAGNLR+AFART+GE +VIFDADFCPR DFLRET PYL++P IGILQTPQ+FR R+EQTWVEQGAG+ QE FYR++Q+N DRFN AVCVG
Sbjct: 492 KDEVKALAGEYGFQYIRRDNRPELKKAGNLRHAFARTSGEVIVIFDADFCPRPDFLRETLPYLVDPSIGILQTPQFFRRREEQTWVEQGAGASQEHFYRLIQVNLDRFNAAVCVG 606
BLAST of mRNA_H-canaliculatus_F_contig1375.2993.1 vs. uniprot
Match: D7G9A1_ECTSI (Cellulose synthase (UDP-forming), family GT2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9A1_ECTSI) HSP 1 Score: 179 bits (453), Expect = 1.120e-50 Identity = 86/110 (78.18%), Postives = 95/110 (86.36%), Query Frame = 1
Query: 19 LAESFGFRYIRRDDRPAMKKAGNLRYAFARTTGEAVVIFDADFCPRADFLRETTPYL-LNPVIGILQTPQYFRFRKEQTWVEQGAGSCQEFFYRMVQMNQDRFNGAVCVG 345
LA +FGF Y+ R D PA+KKAGNLR AFART+GEA+ IFDADFCPRADFL+ET PYL +P IGI+QTPQ+FR RKEQTWVEQGAG QEFFYRMVQMNQDRFN AVCVG
Sbjct: 528 LASTFGFEYVLRADVPALKKAGNLRNAFARTSGEAIAIFDADFCPRADFLKETVPYLGEDPTIGIVQTPQFFRHRKEQTWVEQGAGVTQEFFYRMVQMNQDRFNAAVCVG 637
BLAST of mRNA_H-canaliculatus_F_contig1375.2993.1 vs. uniprot
Match: D7G9A2_ECTSI (Cellulose synthase (UDP-forming), family GT2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9A2_ECTSI) HSP 1 Score: 179 bits (453), Expect = 8.170e-50 Identity = 85/115 (73.91%), Postives = 96/115 (83.48%), Query Frame = 1
Query: 4 DDVRDLAESFGFRYIRRDDRPAMKKAGNLRYAFARTTGEAVVIFDADFCPRADFLRETTPYL-LNPVIGILQTPQYFRFRKEQTWVEQGAGSCQEFFYRMVQMNQDRFNGAVCVG 345
D+V LA FGF Y+ R+D PA+KKAGNLR AFART+GEA+ IFDADFCPR DFL+ET PY +P IGI+QTPQYFR RKEQTW+EQGAG QEFFYRMVQ+NQDRFN AVCVG
Sbjct: 804 DEVAALASKFGFEYVVREDAPALKKAGNLRNAFARTSGEAIAIFDADFCPRPDFLKETVPYFGEDPTIGIVQTPQYFRHRKEQTWIEQGAGVSQEFFYRMVQVNQDRFNAAVCVG 918
BLAST of mRNA_H-canaliculatus_F_contig1375.2993.1 vs. uniprot
Match: D7G9A6_ECTSI (Cellulose synthase (UDP-forming), family GT2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G9A6_ECTSI) HSP 1 Score: 169 bits (427), Expect = 2.610e-46 Identity = 80/115 (69.57%), Postives = 93/115 (80.87%), Query Frame = 1
Query: 4 DDVRDLAESFGFRYIRRDDRPAMKKAGNLRYAFARTTGEAVVIFDADFCPRADFLRETTPYL-LNPVIGILQTPQYFRFRKEQTWVEQGAGSCQEFFYRMVQMNQDRFNGAVCVG 345
D+V+ LA FGF Y+ R + P +KKAGNLR AFA T+GEA+ IFDADFCPR +FL+ET PY +P IGI+QTPQ+FR R EQTW+EQGAG QEFFYRMVQMNQDRFN AVCVG
Sbjct: 765 DEVKALASVFGFEYVLRSNAPELKKAGNLRNAFAMTSGEAIAIFDADFCPRPEFLKETVPYFGEDPTIGIVQTPQFFRVRDEQTWIEQGAGVSQEFFYRMVQMNQDRFNAAVCVG 879
BLAST of mRNA_H-canaliculatus_F_contig1375.2993.1 vs. uniprot
Match: A0A6H5K7X7_9PHAE (GT2 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7X7_9PHAE) HSP 1 Score: 166 bits (419), Expect = 3.140e-45 Identity = 78/101 (77.23%), Postives = 88/101 (87.13%), Query Frame = 1
Query: 46 IRRDDRPAMKKAGNLRYAFARTTGEAVVIFDADFCPRADFLRETTPYL-LNPVIGILQTPQYFRFRKEQTWVEQGAGSCQEFFYRMVQMNQDRFNGAVCVG 345
+ R+D PA+KKAGNLR AFART+GEA+ IFDADFCPRADFL+ET PY +P IGI+QTPQYFR RKEQTW+EQGAG QEFFYRMVQ+NQDRFN AVCVG
Sbjct: 920 VLREDAPALKKAGNLRNAFARTSGEAIAIFDADFCPRADFLKETVPYFGEDPTIGIVQTPQYFRHRKEQTWIEQGAGVSQEFFYRMVQVNQDRFNAAVCVG 1020
BLAST of mRNA_H-canaliculatus_F_contig1375.2993.1 vs. uniprot
Match: A0A5J5F1X0_9PEZI (Nucleotide-diphospho-sugar transferase n=1 Tax=Sphaerosporella brunnea TaxID=1250544 RepID=A0A5J5F1X0_9PEZI) HSP 1 Score: 162 bits (410), Expect = 2.770e-44 Identity = 77/115 (66.96%), Postives = 93/115 (80.87%), Query Frame = 1
Query: 4 DDVRDLAESFGFRYIRRDDRPAMKKAGNLRYAFARTTGEAVVIFDADFCPRADFLRETTPYLL-NPVIGILQTPQYFRFRKEQTWVEQGAGSCQEFFYRMVQMNQDRFNGAVCVG 345
D VR LAES+GF YI RDDRP +KKAGNLR+AFART G+ VI+DADFCPR+DFL E P +L NP + I+QTPQ+FR + EQTWVEQGAGS QE FYR+VQ N+DR+ ++CVG
Sbjct: 384 DSVRQLAESYGFNYICRDDRPRLKKAGNLRWAFARTDGDFFVIYDADFCPRSDFLLELIPKMLANPKLAIVQTPQFFRTKDEQTWVEQGAGSVQELFYRIVQQNRDRWGASICVG 498
BLAST of mRNA_H-canaliculatus_F_contig1375.2993.1 vs. uniprot
Match: A0A6A6VRX0_9PEZI (Nucleotide-diphospho-sugar transferase n=1 Tax=Pseudovirgaria hyperparasitica TaxID=470096 RepID=A0A6A6VRX0_9PEZI) HSP 1 Score: 153 bits (387), Expect = 1.370e-41 Identity = 70/113 (61.95%), Postives = 90/113 (79.65%), Query Frame = 1
Query: 10 VRDLAESFGFRYIRRDDRPAMKKAGNLRYAFARTTGEAVVIFDADFCPRADFLRETTP-YLLNPVIGILQTPQYFRFRKEQTWVEQGAGSCQEFFYRMVQMNQDRFNGAVCVG 345
V+ LAE +GF YI RDDRP +KKAGNLR+AFART+G+ I+DADFCPR DFL E P ++ NP I+QTPQ+FR + EQTWVEQGAG+ QE FYR++Q+N++RF ++CVG
Sbjct: 223 VKTLAEQYGFTYILRDDRPRLKKAGNLRWAFARTSGDFFNIYDADFCPRPDFLMEIIPEHIANPRAAIIQTPQFFRIKDEQTWVEQGAGAVQELFYRVIQVNRNRFGASICVG 335
BLAST of mRNA_H-canaliculatus_F_contig1375.2993.1 vs. uniprot
Match: A0A067T2T6_GALM3 (Glyco_trans_2-like domain-containing protein n=1 Tax=Galerina marginata (strain CBS 339.88) TaxID=685588 RepID=A0A067T2T6_GALM3) HSP 1 Score: 154 bits (390), Expect = 1.470e-41 Identity = 75/115 (65.22%), Postives = 89/115 (77.39%), Query Frame = 1
Query: 4 DDVRDLAESFGFRYIRRDDRPAMKKAGNLRYAFARTTGEAVVIFDADFCPRADFLRETTPYLL-NPVIGILQTPQYFRFRKEQTWVEQGAGSCQEFFYRMVQMNQDRFNGAVCVG 345
D V+ LA ++GF YI RD++P +KKAGNLRYAF RTTG+ VIFDADFCPR DFL E PY NP I I+Q+PQ+F EQTWVEQGA S QEFFYR+VQ+N+DRF A+CVG
Sbjct: 349 DTVKRLAGAYGFNYITRDNKPHLKKAGNLRYAFPRTTGDFFVIFDADFCPRHDFLSEMLPYTKWNPKIAIIQSPQFFHPCPEQTWVEQGASSTQEFFYRIVQVNRDRFGAAICVG 463
BLAST of mRNA_H-canaliculatus_F_contig1375.2993.1 vs. uniprot
Match: UPI001D05514C (uncharacterized protein n=1 Tax=Bacidia gigantensis TaxID=2732470 RepID=UPI001D05514C) HSP 1 Score: 153 bits (387), Expect = 5.800e-41 Identity = 72/113 (63.72%), Postives = 88/113 (77.88%), Query Frame = 1
Query: 10 VRDLAESFGFRYIRRDDRPAMKKAGNLRYAFARTTGEAVVIFDADFCPRADFLRETTPY-LLNPVIGILQTPQYFRFRKEQTWVEQGAGSCQEFFYRMVQMNQDRFNGAVCVG 345
++DLA +GF YI RDDRP +KKAGN+R+A+ARTTG+ +FDADFCPR DFL ET PY L +P I+QTPQYFR K QTWVEQGAGS QEFFYR+VQ +D + ++CVG
Sbjct: 291 IQDLAARYGFEYICRDDRPHLKKAGNMRWAYARTTGDFFTVFDADFCPRPDFLLETIPYHLADPKNAIVQTPQYFRSLKAQTWVEQGAGSVQEFFYRVVQTTRDTWGASICVG 403
BLAST of mRNA_H-canaliculatus_F_contig1375.2993.1 vs. uniprot
Match: R8BL78_PHAM7 (Putative cellulose synthase catalytic subunit protein n=1 Tax=Phaeoacremonium minimum (strain UCR-PA7) TaxID=1286976 RepID=R8BL78_PHAM7) HSP 1 Score: 149 bits (375), Expect = 6.340e-41 Identity = 69/113 (61.06%), Postives = 89/113 (78.76%), Query Frame = 1
Query: 10 VRDLAESFGFRYIRRDDRPAMKKAGNLRYAFARTTGEAVVIFDADFCPRADFLRETTP-YLLNPVIGILQTPQYFRFRKEQTWVEQGAGSCQEFFYRMVQMNQDRFNGAVCVG 345
VRDLA+ +GF YI R+DRP +KKAGNLR+AFART+G+ IFDADFCPR DFL E P +L + I+QTPQ+FR +QTWVEQGAG+ QE FYR+VQ+N++R+ ++CVG
Sbjct: 276 VRDLAQRYGFNYIVREDRPRLKKAGNLRWAFARTSGDFFAIFDADFCPRPDFLMEILPEHLADDKTAIVQTPQFFRITNDQTWVEQGAGATQELFYRVVQVNRNRWGASICVG 388 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1375.2993.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1375.2993.1 >prot_H-canaliculatus_F_contig1375.2993.1 ID=prot_H-canaliculatus_F_contig1375.2993.1|Name=mRNA_H-canaliculatus_F_contig1375.2993.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=115bp KDDVRDLAESFGFRYIRRDDRPAMKKAGNLRYAFARTTGEAVVIFDADFCback to top mRNA from alignment at H-canaliculatus_F_contig1375:15089..18355+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig1375.2993.1 ID=mRNA_H-canaliculatus_F_contig1375.2993.1|Name=mRNA_H-canaliculatus_F_contig1375.2993.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=3267bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1375:15089..18355+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1375:15089..18355+ >mRNA_H-canaliculatus_F_contig1375.2993.1 ID=mRNA_H-canaliculatus_F_contig1375.2993.1|Name=mRNA_H-canaliculatus_F_contig1375.2993.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=690bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1375:15089..18355+ (Hapterophycus canaliculatus Oshoro5f female)back to top |