prot_H-canaliculatus_F_contig13745.2991.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig13745.2991.1
Unique Nameprot_H-canaliculatus_F_contig13745.2991.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length275
Homology
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BLAST of mRNA_H-canaliculatus_F_contig13745.2991.1 vs. uniprot
Match: A0A6H5JZJ1_9PHAE (Bromo domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZJ1_9PHAE)

HSP 1 Score: 172 bits (436), Expect = 2.070e-45
Identity = 85/107 (79.44%), Postives = 95/107 (88.79%), Query Frame = 0 
Query:    1 RFTLDGQPVRKFALIADSGRGATQLCQSLERQAGLSVRGMEDLPDAVFLRGCDPRTSQALDTAIPNLSRPEVQAYVVRLLFQDSFRQFVGDLSEMFSHVQTHLPVPT 107
            RFTL G PVRKFALIA+ GR A +LCQ+L+R+ G+SVRGMEDLPDAVFLRG D RT+QAL+  IPNLSRPEVQAY+VRLLFQDSF +FV DLSEMFSHVQTHLPVPT
Sbjct:  108 RFTLPGHPVRKFALIAECGRSAAELCQALDRK-GVSVRGMEDLPDAVFLRGGDRRTAQALEAGIPNLSRPEVQAYIVRLLFQDSFHEFVSDLSEMFSHVQTHLPVPT 213
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig13745.2991.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JZJ1_9PHAE2.070e-4579.44Bromo domain-containing protein n=1 Tax=Ectocarpus... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig13745contigH-canaliculatus_F_contig13745:422..2968 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig13745.2991.1mRNA_H-canaliculatus_F_contig13745.2991.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig13745 422..2968 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig13745.2991.1 ID=prot_H-canaliculatus_F_contig13745.2991.1|Name=mRNA_H-canaliculatus_F_contig13745.2991.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=275bp
RFTLDGQPVRKFALIADSGRGATQLCQSLERQAGLSVRGMEDLPDAVFLR
GCDPRTSQALDTAIPNLSRPEVQAYVVRLLFQDSFRQFVGDLSEMFSHVQ
THLPVPTQPPVPAPAAAAFAFAARQDGGGGSASRGRQPDKTARFGEDGSG
EGGGGTDDSDRGDGGGGDGSDTRAYDRGGDSRVVGSSGITTFDPGSGSGG
GGATGKTKGRAQKAGGRGGRGGRGRKGNGPGRKVGQGGRGGGGARGGGGG
GGGGGGGGGGGGGGGGGGGGGEGSE
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