mRNA_H-canaliculatus_F_contig13712.2976.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig13712.2976.1 vs. uniprot
Match: D8LM85_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM85_ECTSI) HSP 1 Score: 241 bits (616), Expect = 7.260e-75 Identity = 156/263 (59.32%), Postives = 175/263 (66.54%), Query Frame = 1
Query: 1 VGGDVWCAALLLSAWLLENPEVVRGLDVLELGSGLGLCGIVAGYLAKSVTLTDYVDELIVNLHHNVDMNHTPRV-VVADQPPKVGTEPPSGSLQ---------------RQRQEQERQCRGERWSRLALRPLSSSVVRVRKLDWTAYDHGAQRKDPDEHRGEDRGGEEERKAAADVEGWWWEDRGPSXXXXXXXXXXXXXXXXXXXXXXXX---DAGATLHCDVVIGSALVYSPHHACVADVLSRMFSDGGCRAAYVVQLSTR 732
VGGD+WCAALLLSAWLLENP++V+G VLELGSGLGLCGIVAGYL+KSVTLTDYVDEL+VNL HNVD+NHTPR+ V + EPPS S + RQR +E + S L +RPLS S VRVRKLDWTAYDH A + GGE + GWWW+D G XXXXXXXXXXXX DAGATL CDV IGSALVYSPHHACVADVLSR F+ GGCRA Y++QLSTR
Sbjct: 33 VGGDIWCAALLLSAWLLENPQLVQGTRVLELGSGLGLCGIVAGYLSKSVTLTDYVDELLVNLEHNVDINHTPRIDAVECRGNGTSLEPPSESQEXXXXXXXXXXXXXXGRQRLGRENE------SLLEVRPLSPSRVRVRKLDWTAYDHDATE-------AWEEGGE-------GLRGWWWDDPGRGGDRXXXXXXXXXXXXRATTTTTPSTPQDAGATLRCDVAIGSALVYSPHHACVADVLSRAFAAGGCRAGYILQLSTR 275
BLAST of mRNA_H-canaliculatus_F_contig13712.2976.1 vs. uniprot
Match: A0A6H5JTW0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTW0_9PHAE) HSP 1 Score: 238 bits (607), Expect = 1.550e-73 Identity = 140/269 (52.04%), Postives = 162/269 (60.22%), Query Frame = 1
Query: 4 GGDVWCAALLLSAWLLENPEVVRGLDVLELGSGLGLCGIVAGYLAKSVTLTDYVDELIVNLHHNVDMNHTPRVVVAD-QPPKVGTEPPSGSLQ-------------------RQRQEQERQCRGERWSRLALRPLSSSVVRVRKLDWTAYDHGAQRKDPDEHRGEDRGGEEERKAAADVEGWWWEDRGPSXXXXXXXXXXXXXXXXXXXXXXXX---DAGATLHCDVVIGSALVYSPHHACVADVLSRMFSDGGCRAAYVVQLSTRQAK 741
GGD+WCAALLLSAWLLENP++V+G VLELGSGLGLCGIVAGYL+KSVTLTDYVDEL+VNL HNVD+N PR+V + + + PS S + RQR +E+ S L +RPLS S VRVRKLDWTAYDH A EE + + G WW+D GP DAGATL CDV IGSALVYSPHHACVADVLSR F+ GGCRA Y++QLSTRQA+
Sbjct: 17 GGDIWCAALLLSAWLLENPQLVQGTTVLELGSGLGLCGIVAGYLSKSVTLTDYVDELLVNLEHNVDINRAPRIVAVEWRGNETSQGAPSESQEXXXXXXXXXXXXXXXXXXGRQRPSREK-------SLLEVRPLSPSRVRVRKLDWTAYDHEAT--------------EEWEEGGEGLRGCWWDDPGPGDDRPGKQEDRGGAEKRATTTTTPSTPEDAGATLRCDVAIGSALVYSPHHACVADVLSRAFASGGCRAGYILQLSTRQAR 264
BLAST of mRNA_H-canaliculatus_F_contig13712.2976.1 vs. uniprot
Match: F0ZXQ6_DICPU (Uncharacterized protein n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZXQ6_DICPU) HSP 1 Score: 81.3 bits (199), Expect = 1.440e-14 Identity = 35/69 (50.72%), Postives = 51/69 (73.91%), Query Frame = 1
Query: 1 VGGDVWCAALLLSAWLLENPEVVRGLDVLELGSGLGLCGIVAGYLAKSVTLTDYVDELIVNLHHNVDMN 207
+G +W AA++LS W+ +N G VLELGSG+GL GI++ Y AK+VTLTDY++ L+ NL +NV++N
Sbjct: 58 IGCSIWDAAIILSRWIYKNQNAFEGQSVLELGSGVGLPGILSAYYAKNVTLTDYLNPLVENLKYNVELN 126
BLAST of mRNA_H-canaliculatus_F_contig13712.2976.1 vs. uniprot
Match: A0A151ZAM5_9MYCE (Uncharacterized protein n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151ZAM5_9MYCE) HSP 1 Score: 79.7 bits (195), Expect = 5.360e-14 Identity = 36/69 (52.17%), Postives = 49/69 (71.01%), Query Frame = 1
Query: 1 VGGDVWCAALLLSAWLLENPEVVRGLDVLELGSGLGLCGIVAGYLAKSVTLTDYVDELIVNLHHNVDMN 207
+G +W AA++LS W+ +PE VLELGSG+GL GI++ Y A VTLTDY++ LI NL +NVD+N
Sbjct: 58 IGCAIWDAAIILSRWIYAHPEAFTNKSVLELGSGVGLPGILSSYYANDVTLTDYLEPLIDNLKYNVDLN 126
BLAST of mRNA_H-canaliculatus_F_contig13712.2976.1 vs. uniprot
Match: A0A8J4VA45_9MYCE (Uncharacterized protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4VA45_9MYCE) HSP 1 Score: 78.2 bits (191), Expect = 1.870e-13 Identity = 34/69 (49.28%), Postives = 50/69 (72.46%), Query Frame = 1
Query: 1 VGGDVWCAALLLSAWLLENPEVVRGLDVLELGSGLGLCGIVAGYLAKSVTLTDYVDELIVNLHHNVDMN 207
+G +W AA+++S W+ +N V VLELGSG+GL GI++ Y AK VTLTDY+ LI NL++N+++N
Sbjct: 58 IGCSIWDAAIIISRWIFKNNTVFNNQTVLELGSGVGLPGILSAYYAKHVTLTDYLPPLIENLNYNIELN 126
BLAST of mRNA_H-canaliculatus_F_contig13712.2976.1 vs. uniprot
Match: F4QEN1_CAVFA (Uncharacterized protein n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4QEN1_CAVFA) HSP 1 Score: 77.8 bits (190), Expect = 2.190e-13 Identity = 36/69 (52.17%), Postives = 49/69 (71.01%), Query Frame = 1
Query: 1 VGGDVWCAALLLSAWLLENPEVVRGLDVLELGSGLGLCGIVAGYLAKSVTLTDYVDELIVNLHHNVDMN 207
+G +W AA++ S W+ +N +V G VLELGSG+GL GI+A Y A VTL+DY+ LI NL +NVD+N
Sbjct: 58 IGCAIWDAAIIFSRWVYKNTQVFDGQKVLELGSGVGLPGILASYYAAHVTLSDYLPPLIENLQYNVDLN 126
BLAST of mRNA_H-canaliculatus_F_contig13712.2976.1 vs. uniprot
Match: F4PU76_CAVFA (Methyltransferase type 12 domain-containing protein n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4PU76_CAVFA) HSP 1 Score: 77.0 bits (188), Expect = 1.150e-12 Identity = 34/69 (49.28%), Postives = 47/69 (68.12%), Query Frame = 1
Query: 1 VGGDVWCAALLLSAWLLENPEVVRGLDVLELGSGLGLCGIVAGYLAKSVTLTDYVDELIVNLHHNVDMN 207
V VW + L+ W+L+NP + G DVLELGSG+G+CGI AG ++K+V +TDY D++I L NV N
Sbjct: 181 VAWRVWDGGIGLAKWVLDNPSIFEGKDVLELGSGVGVCGIAAGLISKNVLVTDYTDKIIQALQDNVKRN 249
BLAST of mRNA_H-canaliculatus_F_contig13712.2976.1 vs. uniprot
Match: UPI000644FD2C (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644FD2C) HSP 1 Score: 77.0 bits (188), Expect = 1.310e-12 Identity = 35/69 (50.72%), Postives = 46/69 (66.67%), Query Frame = 1
Query: 1 VGGDVWCAALLLSAWLLENPEVVRGLDVLELGSGLGLCGIVAGYLAKSVTLTDYVDELIVNLHHNVDMN 207
V VW A + W+LENP++ G DVLELGSGLG+ G+ AG LAKSV +TDY +++ L NV +N
Sbjct: 170 VAWRVWDAGIGFCRWILENPDIFTGKDVLELGSGLGIAGLAAGLLAKSVLMTDYTPKIVRTLRDNVKIN 238
BLAST of mRNA_H-canaliculatus_F_contig13712.2976.1 vs. uniprot
Match: D3B3S1_POLPP (Uncharacterized protein n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3B3S1_POLPP) HSP 1 Score: 74.7 bits (182), Expect = 3.280e-12 Identity = 31/69 (44.93%), Postives = 49/69 (71.01%), Query Frame = 1
Query: 1 VGGDVWCAALLLSAWLLENPEVVRGLDVLELGSGLGLCGIVAGYLAKSVTLTDYVDELIVNLHHNVDMN 207
+G +W AA+++S W+ ++ + G LELGSG+GL GI+A + +S+TLTDY+ L+ NL +NVD+N
Sbjct: 58 IGCAIWDAAIIMSRWIFKHQDAFSGQKCLELGSGVGLTGILAAHFCQSITLTDYLPPLLENLKYNVDLN 126
BLAST of mRNA_H-canaliculatus_F_contig13712.2976.1 vs. uniprot
Match: D3B9X7_POLPP (Methyltransferase type 12 domain-containing protein n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3B9X7_POLPP) HSP 1 Score: 75.5 bits (184), Expect = 4.120e-12 Identity = 33/78 (42.31%), Postives = 49/78 (62.82%), Query Frame = 1
Query: 1 VGGDVWCAALLLSAWLLENPEVVRGLDVLELGSGLGLCGIVAGYLAKSVTLTDYVDELIVNLHHNVDMNHTPRVVVAD 234
V VW A + + W+LENP++ G +VLELG+GLG+ G+ AG L +SV +TDY +++ L NV MN ++ D
Sbjct: 172 VAWRVWDAGIGFTRWILENPQIFEGKEVLELGAGLGIAGLAAGLLCQSVLMTDYTPKIVSTLRENVKMNSVRSKLIRD 249 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig13712.2976.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig13712.2976.1 >prot_H-canaliculatus_F_contig13712.2976.1 ID=prot_H-canaliculatus_F_contig13712.2976.1|Name=mRNA_H-canaliculatus_F_contig13712.2976.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=250bp VGGDVWCAALLLSAWLLENPEVVRGLDVLELGSGLGLCGIVAGYLAKSVTback to top mRNA from alignment at H-canaliculatus_F_contig13712:1690..2875- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig13712.2976.1 ID=mRNA_H-canaliculatus_F_contig13712.2976.1|Name=mRNA_H-canaliculatus_F_contig13712.2976.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=1186bp|location=Sequence derived from alignment at H-canaliculatus_F_contig13712:1690..2875- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig13712:1690..2875- >mRNA_H-canaliculatus_F_contig13712.2976.1 ID=mRNA_H-canaliculatus_F_contig13712.2976.1|Name=mRNA_H-canaliculatus_F_contig13712.2976.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1500bp|location=Sequence derived from alignment at H-canaliculatus_F_contig13712:1690..2875- (Hapterophycus canaliculatus Oshoro5f female)back to top |