prot_H-canaliculatus_F_contig1371.2974.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1371.2974.1
Unique Nameprot_H-canaliculatus_F_contig1371.2974.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length114
Homology
BLAST of mRNA_H-canaliculatus_F_contig1371.2974.1 vs. uniprot
Match: D7G7B6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7B6_ECTSI)

HSP 1 Score: 117 bits (292), Expect = 9.350e-32
Identity = 102/110 (92.73%), Postives = 104/110 (94.55%), Query Frame = 0
Query:    1 MLLVLGGNASPTKEDVTTALAAVGVDCDEARLDQLIADMAGKDIAALIEAGKGKLASFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDMGGGMDMF-----GGGD 105
            MLLVLGGNASPTKEDVTTALAAVG++CDEARLDQLIADMAGKDIAALIEAGKGKLASFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX IDMGGGMDMF     GGGD
Sbjct:    1 MLLVLGGNASPTKEDVTTALAAVGIECDEARLDQLIADMAGKDIAALIEAGKGKLASFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-IDMGGGMDMFXXXXEGGGD 109          
BLAST of mRNA_H-canaliculatus_F_contig1371.2974.1 vs. uniprot
Match: A0A835ZFT3_9STRA (60s acidic ribosomal protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFT3_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 3.520e-23
Identity = 85/107 (79.44%), Postives = 97/107 (90.65%), Query Frame = 0
Query:    1 MLLVLGGNASPTKEDVTTALAAVGVDCDEARLDQLIADMAGKDIAALIEAGKGKLASFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDMGGGMDMFGGGDEG 107
            M+LVLGGNASP+ EDVT AL++VG++ DEARL QLIA+M GKD+  ++EAGK KLAS GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+DMGGGMDMFGGG+ G
Sbjct:    8 MMLVLGGNASPSAEDVTKALSSVGIEADEARLSQLIAEMEGKDLNEVMEAGKKKLASLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDMGGGMDMFGGGEGG 114          
BLAST of mRNA_H-canaliculatus_F_contig1371.2974.1 vs. uniprot
Match: A0A448ZRL0_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZRL0_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 4.170e-16
Identity = 39/59 (66.10%), Postives = 49/59 (83.05%), Query Frame = 0
Query:    1 MLLVLGGNASPTKEDVTTALAAVGVDCDEARLDQLIADMAGKDIAALIEAGKGKLASFG 59
            ++L +GGNASP+KEDVT AL+AVGV+ D A LD+L AD+ GK+IA LIEAGK +LA FG
Sbjct:    8 LMLQIGGNASPSKEDVTGALSAVGVEADSASLDKLFADIEGKEIAELIEAGKDQLAKFG 66          
BLAST of mRNA_H-canaliculatus_F_contig1371.2974.1 vs. uniprot
Match: B7GA61_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7GA61_PHATC)

HSP 1 Score: 77.4 bits (189), Expect = 4.400e-16
Identity = 73/102 (71.57%), Postives = 89/102 (87.25%), Query Frame = 0
Query:    1 MLLVLGGNASPTKEDVTTALAAVGVDCDEARLDQLIADMAGKDIAALIEAGKGKLASFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDMGGGMDMFG 102
            +LL LGGNASPTK+D+T AL+AVGV+ D A LD+++AD+ G+D+ AL+E+G   LA+FGXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   +D+GGGMDMFG
Sbjct:    8 LLLQLGGNASPTKDDITQALSAVGVEVDGADLDRMLADLEGQDLEALLESGNALLATFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---MDLGGGMDMFG 106          
BLAST of mRNA_H-canaliculatus_F_contig1371.2974.1 vs. uniprot
Match: A0A7S2RFX2_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RFX2_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 9.030e-16
Identity = 74/107 (69.16%), Postives = 90/107 (84.11%), Query Frame = 0
Query:    1 MLLVLGGNASPTKEDVTTALAAVGVDCDEARLDQLIADMAGKDIAALIEAGKGKLASFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDMGGGMDMFGGGDEG 107
            +LLVLGGNASP+ +DVT +LA+VGV+ D+  LD+LI+++ GKD+  ++E+GK  LA FGXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    DMGGGMDMFGG + G
Sbjct:    8 LLLVLGGNASPSADDVTKSLASVGVEVDKESLDKLISELDGKDVNEIMESGKDMLAKFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---ADMGGGMDMFGGDEAG 111          
BLAST of mRNA_H-canaliculatus_F_contig1371.2974.1 vs. uniprot
Match: A0A7S2LS78_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LS78_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 1.340e-14
Identity = 73/106 (68.87%), Postives = 90/106 (84.91%), Query Frame = 0
Query:    1 MLLVLGGNASPTKEDVTTALAAVGVDCDEARLDQLIADMAGKDIAALIEAGKGKLASFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDMGGGMDMFGGGDE 106
            ++LVLGGNA+P+ +DV TAL+AVGV+ D   L +LI+++ GKD+A ++E GK +LA FGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  +D+GGGMDMFG G E
Sbjct:    8 LMLVLGGNATPSADDVKTALSAVGVESDADDLGKLISELEGKDLAEILETGKERLAKFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--MDLGGGMDMFGDGGE 111          
BLAST of mRNA_H-canaliculatus_F_contig1371.2974.1 vs. uniprot
Match: A0A7S0C3X8_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C3X8_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 4.100e-14
Identity = 73/103 (70.87%), Postives = 86/103 (83.50%), Query Frame = 0
Query:    1 MLLVLGGNASPTKEDVTTALAAVGVDCDEARLDQLIADMAGKDIAALIEAGKGKLASFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDMGGGMDMFGG 103
            +LLVLGGNASP+ +DV  AL  VGV+ ++ RL+ LI+++ GKD++ LI  G GKLA  G XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +DMGGGMDMFGG
Sbjct:    8 LLLVLGGNASPSADDVKKALGVVGVEVEDERLNALISELEGKDLSELIATGTGKLAQLGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-MDMGGGMDMFGG 109          
BLAST of mRNA_H-canaliculatus_F_contig1371.2974.1 vs. uniprot
Match: A0A4D9D2N6_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D2N6_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 4.210e-14
Identity = 75/108 (69.44%), Postives = 86/108 (79.63%), Query Frame = 0
Query:    1 MLLVLGGNASPTKEDVTTALAAVGVDCDEARLDQLIADMAGKDIAALIEAGKGKLASFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXI---DMGGGMDMFGGGD 105
            +LL LGGN +P+  DVTTAL++VGV+ DE RL  L+ D+ GKD+  LIE G   LA+FG XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    D+GG MDMFGGGD
Sbjct:    8 LLLKLGGNENPSASDVTTALSSVGVEADEGRLSTLLKDLEGKDVETLIEEGSKLLATFGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADLGGAMDMFGGGD 115          
BLAST of mRNA_H-canaliculatus_F_contig1371.2974.1 vs. uniprot
Match: A0A7R9ZND5_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZND5_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 5.950e-14
Identity = 70/107 (65.42%), Postives = 88/107 (82.24%), Query Frame = 0
Query:    1 MLLVLGGNASPTKEDVTTALAAVGVDCDEARLDQLIADMAGKDIAALIEAGKGKLASFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDMGGGMDMFGGGDEG 107
            +L VLGG  +PTK+D++ A++ VG++ D+A +D L+  + GKD+  L+E+GKG LA  G XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +D+GGGMDMFGG DEG
Sbjct:    8 LLCVLGGKENPTKDDISKAMSTVGLEADDASVDALLTALEGKDLNELLESGKGLLAKIGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMDLGGGMDMFGG-DEG 113          
BLAST of mRNA_H-canaliculatus_F_contig1371.2974.1 vs. uniprot
Match: A0A7S1XRX9_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XRX9_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 7.250e-14
Identity = 71/106 (66.98%), Postives = 84/106 (79.25%), Query Frame = 0
Query:    1 MLLVLGGNASPTKEDVTTALAAVGVDCDEARLDQLIADMAGKDIAALIEAGKGKLASFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-IDMGGGMDMFGGGD 105
            +LL++GGNA+PT +DVT ALA VGV  D   L +L+ ++AGKDIA +IE GK +LA   XXXXXXXXXXXXXXXXXXXXXXX   XXXX   +D+GGGMDMFGGGD
Sbjct:   80 LLLMMGGNAAPTADDVTAALAEVGVTADADALGKLLGEIAGKDIAEIIEMGKDRLAGXXXXXXXXXXXXXXXXXXXXXXXXXEPEXXXXPEEVDLGGGMDMFGGGD 185          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1371.2974.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G7B6_ECTSI9.350e-3292.73Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZFT3_9STRA3.520e-2379.4460s acidic ribosomal protein-domain-containing pro... [more]
A0A448ZRL0_9STRA4.170e-1666.10Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
B7GA61_PHATC4.400e-1671.57Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A7S2RFX2_9STRA9.030e-1669.16Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A7S2LS78_9STRA1.340e-1468.87Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S0C3X8_9STRA4.100e-1470.87Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A4D9D2N6_9STRA4.210e-1469.44Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7R9ZND5_9STRA5.950e-1465.42Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
A0A7S1XRX9_9STRA7.250e-1466.98Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038716Ribosomal protein P1/P2, N-terminal domainGENE3D1.10.10.1410coord: 1..53
e-value: 2.6E-15
score: 58.3
NoneNo IPR availablePFAMPF00428Ribosomal_60scoord: 10..98
e-value: 1.7E-18
score: 67.0
NoneNo IPR availablePANTHERPTHR2114160S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBERcoord: 1..101
NoneNo IPR availablePANTHERPTHR21141:SF560S ACIDIC RIBOSOMAL PROTEIN P2coord: 1..101
IPR027534Ribosomal protein L12 familyHAMAPMF_01478Ribosomal_L12_archcoord: 1..102
score: 12.544

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1371contigH-canaliculatus_F_contig1371:22009..24183 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1371.2974.1mRNA_H-canaliculatus_F_contig1371.2974.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1371 22009..25127 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1371.2974.1 ID=prot_H-canaliculatus_F_contig1371.2974.1|Name=mRNA_H-canaliculatus_F_contig1371.2974.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=114bp
MLLVLGGNASPTKEDVTTALAAVGVDCDEARLDQLIADMAGKDIAALIEA
GKGKLASFGGGGGGGGGGGGGGGDAAAPAAEEKKEEEEEEEIDMGGGMDM
FGGGDEGKTKSET*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027534Ribosomal_L12
IPR038716P1/P2_N_sf