prot_H-canaliculatus_F_contig1370.2967.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1370.2967.1
Unique Nameprot_H-canaliculatus_F_contig1370.2967.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length894
Homology
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BLAST of mRNA_H-canaliculatus_F_contig1370.2967.1 vs. uniprot
Match: D7G361_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G361_ECTSI)

HSP 1 Score: 131 bits (329), Expect = 1.670e-27
Identity = 59/67 (88.06%), Postives = 64/67 (95.52%), Query Frame = 0 
Query:    1 MSTATGRPRPFLDGVYRTACNYCVSSKRGCSGGEPCDQCEKRGKTCVYAQRRKSGPRGRPASGRSGK 67
            M+T+TGRPRPFL+GV+RTACNYCVSSKRGCSGGEPCDQCEKRGK C+YAQRRKSGPR RPASGRS K
Sbjct:    1 MTTSTGRPRPFLNGVFRTACNYCVSSKRGCSGGEPCDQCEKRGKPCIYAQRRKSGPRSRPASGRSSK 67
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1370.2967.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G361_ECTSI1.670e-2788.06Zn(2)-C6 fungal-type domain-containing protein n=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001138Zn(2)-C6 fungal-type DNA-binding domainSMARTSM00066gal4_2coord: 14..57
e-value: 5.0E-4
score: 29.4
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPFAMPF00172Zn_cluscoord: 18..53
e-value: 2.4E-5
score: 24.4
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPROSITEPS50048ZN2_CY6_FUNGAL_2coord: 19..48
score: 8.753
IPR036864Zn(2)-C6 fungal-type DNA-binding domain superfamilyGENE3D4.10.240.10coord: 15..76
e-value: 1.5E-5
score: 26.8
IPR036864Zn(2)-C6 fungal-type DNA-binding domain superfamilySUPERFAMILY57701Zn2/Cys6 DNA-binding domaincoord: 16..53
NoneNo IPR availablePANTHERPTHR14445:SF41coord: 164..584
NoneNo IPR availablePANTHERPTHR14445GRB10 INTERACTING GYF PROTEINcoord: 164..584

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1370contigH-canaliculatus_F_contig1370:11809..15034 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1370.2967.1mRNA_H-canaliculatus_F_contig1370.2967.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1370 6525..15034 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1370.2967.1 ID=prot_H-canaliculatus_F_contig1370.2967.1|Name=mRNA_H-canaliculatus_F_contig1370.2967.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=894bp
MSTATGRPRPFLDGVYRTACNYCVSSKRGCSGGEPCDQCEKRGKTCVYAQ
RRKSGPRGRPASGRSGKGRSRAKARRDSRAAAAAAVGANSNAGSGPPQAV
STLEPAAGGGTRVVAGDGAGGASFSAWAGYNGAVTSRDLGLAQGRRNGIS
ARENALQWERRRLEQQQQQQQPQRRQQQAPTAGPVANYERGGNRTPPPPL
AIPPITTSMPTRNISGPIMSPPLSTPPSSSSPVAGGGKLEIPLPPAPALI
LPPGSRALGGGRATGFGYEGDNRSSSSSISSASSGPTDFKRLRLSLTPPL
GPSGASPALPSVASSPSSSEPRNGGTPSFSPRPAPALDRGDGAGGSGEQA
GASHRWLPPLRLSSSAPTCTPTSSSRATDAYLSASPSSSLSPPYAGSGPA
SGSSSSPTVGRQASTPRGGSGDFTAVAPGMTTMIPARRESEGMGVAEAPS
LGASGAGVMVGGVSTGAATTSFSLTGSSWGTAEPAAAGTTTSAAKSFVGG
GGGVRVGAAVEEAEISFKQIFATTEGESREYQLRPQRSQQQQQQQQQQQQ
QQEPSHQRHHQDRQQRPQQEEQERSQQSKRQLSLGSLLMAEDDELGESSS
RHGNAATSHIRSNGYKATSGAIPMGTCMPTQGDVFGRTNPNAAAAAQSAL
VSPVSSSGMPARAVSTESCGSGMGFGDVGGSYSGDRASPGHVPLVDGGRL
FPLEPLPFPLHRRPSEVATVMMTASAATTATATTWGGERGGAAAPAPAAV
AQRDPSPPRPTTSSSSPSSSDGRLDCASLANMRTPMTREASLMRAVDAAT
CSPSPPSSSAPFGGGGGDANVVTSDMRVPLSREASIIRAMEVVTANSGEH
SGSSSGGGGGGGGNNNAQVDCWEAAAELFATVGLGDINSDDALC
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036864Zn2-C6_fun-type_DNA-bd_sf
IPR001138Zn2-C6_fun-type_DNA-bd