prot_H-canaliculatus_F_contig1369.2958.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1369.2958.1
Unique Nameprot_H-canaliculatus_F_contig1369.2958.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length93
Homology
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1369.2958.1 vs. uniprot
Match: D7FHP4_ECTSI (AP-1 complex subunit gamma n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHP4_ECTSI)

HSP 1 Score: 166 bits (419), Expect = 1.080e-45
Identity = 84/93 (90.32%), Postives = 86/93 (92.47%), Query Frame = 0 
Query:    1 MECIKLITSSNYMDKRIGYLGLTLLLTDQEEVLMLVTNSLKVDLHSENMFVVGLSLTTVGNLSTPDIARDLMMEVEKHLRGARPYLVKKVWRC 93
            MECIKLITS NYMDKRIGYLGLTLLLTDQEEVLMLVTNSLKVD+HS NMFV GLSLTTVGNL+TPDIARDLMMEVEKHLRG RPYLVKK   C
Sbjct:   66 MECIKLITSPNYMDKRIGYLGLTLLLTDQEEVLMLVTNSLKVDMHSSNMFVAGLSLTTVGNLATPDIARDLMMEVEKHLRGGRPYLVKKAALC 158
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1369.2958.1 vs. uniprot
Match: A0A836CEJ3_9STRA (AP-1 complex subunit gamma n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEJ3_9STRA)

HSP 1 Score: 135 bits (341), Expect = 4.090e-35
Identity = 69/93 (74.19%), Postives = 81/93 (87.10%), Query Frame = 0 
Query:    1 MECIKLITSSNYMDKRIGYLGLTLLLTDQEEVLMLVTNSLKVDLHSENMFVVGLSLTTVGNLSTPDIARDLMMEVEKHLRGARPYLVKKVWRC 93
            MECIKLITS  + DKRIGYLGL LLLT++EEVLMLVTNSLKVDL+S+N FVVGL+LTTVGNL+TPDIARDLMM+V+++L+   PYL KK   C
Sbjct:   66 MECIKLITSPEFTDKRIGYLGLMLLLTEKEEVLMLVTNSLKVDLNSQNPFVVGLALTTVGNLATPDIARDLMMDVDRYLQSNNPYLRKKAALC 158
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1369.2958.1 vs. uniprot
Match: A0A485KG16_9STRA (AP-1 complex subunit gamma n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KG16_9STRA)

HSP 1 Score: 123 bits (308), Expect = 1.170e-30
Identity = 61/89 (68.54%), Postives = 75/89 (84.27%), Query Frame = 0 
Query:    1 MECIKLITSSNYMDKRIGYLGLTLLLTDQEEVLMLVTNSLKVDLHSENMFVVGLSLTTVGNLSTPDIARDLMMEVEKHLRGARPYLVKK 89
            MEC+KLI +SN+ +KRIGYLGL LLLTDQEEVLMLVTNSLK DL+  N FVVGLSLT VGN+++PD+ARDL+ +++KHL+    YL KK
Sbjct:   66 MECLKLIAASNFSEKRIGYLGLMLLLTDQEEVLMLVTNSLKNDLNHSNPFVVGLSLTAVGNIASPDMARDLITDIDKHLKSENNYLRKK 154
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1369.2958.1 vs. uniprot
Match: A0A6G0WMQ6_9STRA (AP-1 complex subunit gamma n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WMQ6_9STRA)

HSP 1 Score: 120 bits (302), Expect = 7.570e-30
Identity = 60/89 (67.42%), Postives = 74/89 (83.15%), Query Frame = 0 
Query:    1 MECIKLITSSNYMDKRIGYLGLTLLLTDQEEVLMLVTNSLKVDLHSENMFVVGLSLTTVGNLSTPDIARDLMMEVEKHLRGARPYLVKK 89
            MEC+KLI +SN+ +KRIGYLGL LLLTDQEEVL LVTNSLK DL+  N FVVGLSLT VGN+++PD+ARDL+ +++KHL+    YL KK
Sbjct:   66 MECLKLIAASNFSEKRIGYLGLMLLLTDQEEVLTLVTNSLKNDLNHSNPFVVGLSLTAVGNIASPDMARDLITDIDKHLKSENNYLRKK 154
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1369.2958.1 vs. uniprot
Match: A0A425C4M0_9STRA (Adaptin_N domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A425C4M0_9STRA)

HSP 1 Score: 117 bits (292), Expect = 7.630e-30
Identity = 58/89 (65.17%), Postives = 74/89 (83.15%), Query Frame = 0 
Query:    1 MECIKLITSSNYMDKRIGYLGLTLLLTDQEEVLMLVTNSLKVDLHSENMFVVGLSLTTVGNLSTPDIARDLMMEVEKHLRGARPYLVKK 89
            MEC+KLI ++N+ +KRIGYLGL LLLTDQEEVL LVTNSLK DL+  N FVVGLSLT VGN+++PD+ARDL+ +++KHL+    +L KK
Sbjct:   66 MECLKLIAANNFSEKRIGYLGLMLLLTDQEEVLTLVTNSLKNDLNHVNPFVVGLSLTAVGNIASPDMARDLITDIDKHLKSDNHFLRKK 154
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1369.2958.1 vs. uniprot
Match: A0A397DE85_9STRA (Adaptin_N domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397DE85_9STRA)

HSP 1 Score: 117 bits (292), Expect = 1.130e-29
Identity = 58/89 (65.17%), Postives = 74/89 (83.15%), Query Frame = 0 
Query:    1 MECIKLITSSNYMDKRIGYLGLTLLLTDQEEVLMLVTNSLKVDLHSENMFVVGLSLTTVGNLSTPDIARDLMMEVEKHLRGARPYLVKK 89
            MEC+KLI ++N+ +KRIGYLGL LLLTDQEEVL LVTNSLK DL+  N FVVGLSLT VGN+++PD+ARDL+ +++KHL+    +L KK
Sbjct:   66 MECLKLIAANNFSEKRIGYLGLMLLLTDQEEVLTLVTNSLKNDLNHVNPFVVGLSLTAVGNIASPDMARDLITDIDKHLKSDNHFLRKK 154
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1369.2958.1 vs. uniprot
Match: K8YRB5_NANGC (AP-1 complex subunit gamma-1 (Fragment) n=3 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YRB5_NANGC)

HSP 1 Score: 118 bits (295), Expect = 5.880e-29
Identity = 60/89 (67.42%), Postives = 74/89 (83.15%), Query Frame = 0 
Query:    1 MECIKLITSSNYMDKRIGYLGLTLLLTDQEEVLMLVTNSLKVDLHSENMFVVGLSLTTVGNLSTPDIARDLMMEVEKHLRGARPYLVKK 89
            MEC+KLI S ++ +KRIGYLGL+LLLT+QEEVL LVTNS+K DL+S N FVVGL+L+ VGNL+T DIARDL M+V+KHL+    YL KK
Sbjct:   72 MECLKLIASPHFFEKRIGYLGLSLLLTEQEEVLTLVTNSIKNDLNSPNPFVVGLALSAVGNLATEDIARDLAMDVDKHLKSNNSYLRKK 160
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1369.2958.1 vs. uniprot
Match: W7TQP3_9STRA (AP-1 complex subunit gamma n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQP3_9STRA)

HSP 1 Score: 118 bits (295), Expect = 6.690e-29
Identity = 60/89 (67.42%), Postives = 74/89 (83.15%), Query Frame = 0 
Query:    1 MECIKLITSSNYMDKRIGYLGLTLLLTDQEEVLMLVTNSLKVDLHSENMFVVGLSLTTVGNLSTPDIARDLMMEVEKHLRGARPYLVKK 89
            MEC+KLI S ++ +KRIGYLGL+LLLT+QEEVL LVTNS+K DL+S N FVVGL+L+ VGNL+T DIARDL M+V+KHL+    YL KK
Sbjct:   66 MECLKLIASPHFFEKRIGYLGLSLLLTEQEEVLTLVTNSIKNDLNSPNPFVVGLALSAVGNLATEDIARDLAMDVDKHLKSNNSYLRKK 154
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1369.2958.1 vs. uniprot
Match: A0A397F0B5_9STRA (Adaptin_N domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397F0B5_9STRA)

HSP 1 Score: 117 bits (292), Expect = 9.090e-29
Identity = 58/89 (65.17%), Postives = 74/89 (83.15%), Query Frame = 0 
Query:    1 MECIKLITSSNYMDKRIGYLGLTLLLTDQEEVLMLVTNSLKVDLHSENMFVVGLSLTTVGNLSTPDIARDLMMEVEKHLRGARPYLVKK 89
            MEC+KLI ++N+ +KRIGYLGL LLLTDQEEVL LVTNSLK DL+  N FVVGLSLT VGN+++PD+ARDL+ +++KHL+    +L KK
Sbjct:   66 MECLKLIAANNFSEKRIGYLGLMLLLTDQEEVLTLVTNSLKNDLNHVNPFVVGLSLTAVGNIASPDMARDLITDIDKHLKSDNHFLRKK 154
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1369.2958.1 vs. uniprot
Match: A0A1V9YXT6_9STRA (AP-1 complex subunit gamma n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1V9YXT6_9STRA)

HSP 1 Score: 117 bits (293), Expect = 1.240e-28
Identity = 58/89 (65.17%), Postives = 73/89 (82.02%), Query Frame = 0 
Query:    1 MECIKLITSSNYMDKRIGYLGLTLLLTDQEEVLMLVTNSLKVDLHSENMFVVGLSLTTVGNLSTPDIARDLMMEVEKHLRGARPYLVKK 89
            MEC+KLI ++N+ +KRIGYLGL LLL DQEEVL LVTNSLK DL+  N FVVGLSLT VGN+++PD+ARDL+ +++KHL+    YL KK
Sbjct:   66 MECLKLIAANNFSEKRIGYLGLMLLLNDQEEVLTLVTNSLKNDLNHVNPFVVGLSLTAVGNIASPDMARDLITDIDKHLKSENDYLRKK 154
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1369.2958.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FHP4_ECTSI1.080e-4590.32AP-1 complex subunit gamma n=2 Tax=Ectocarpus TaxI... [more]
A0A836CEJ3_9STRA4.090e-3574.19AP-1 complex subunit gamma n=1 Tax=Tribonema minus... [more]
A0A485KG16_9STRA1.170e-3068.54AP-1 complex subunit gamma n=1 Tax=Aphanomyces ste... [more]
A0A6G0WMQ6_9STRA7.570e-3067.42AP-1 complex subunit gamma n=1 Tax=Aphanomyces eut... [more]
A0A425C4M0_9STRA7.630e-3065.17Adaptin_N domain-containing protein n=1 Tax=Aphano... [more]
A0A397DE85_9STRA1.130e-2965.17Adaptin_N domain-containing protein n=2 Tax=Aphano... [more]
K8YRB5_NANGC5.880e-2967.42AP-1 complex subunit gamma-1 (Fragment) n=3 Tax=Na... [more]
W7TQP3_9STRA6.690e-2967.42AP-1 complex subunit gamma n=3 Tax=Monodopsidaceae... [more]
A0A397F0B5_9STRA9.090e-2965.17Adaptin_N domain-containing protein (Fragment) n=1... [more]
A0A1V9YXT6_9STRA1.240e-2865.17AP-1 complex subunit gamma n=3 Tax=Saprolegniaceae... [more]

Pages

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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002553Clathrin/coatomer adaptor, adaptin-like, N-terminalPFAMPF01602Adaptin_Ncoord: 1..90
e-value: 6.0E-25
score: 87.8
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 1..93
e-value: 1.8E-32
score: 114.4
NoneNo IPR availablePANTHERPTHR22780:SF5ADAPTOR PROTEIN COMPLEX 1, GAMMA SUBUNIT, ISOFORM Dcoord: 1..93
NoneNo IPR availablePANTHERPTHR22780ADAPTIN, ALPHA/GAMMA/EPSILONcoord: 1..93
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 1..91

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1369contigH-canaliculatus_F_contig1369:695..1560 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1369.2958.1mRNA_H-canaliculatus_F_contig1369.2958.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1369 695..1584 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1369.2958.1 ID=prot_H-canaliculatus_F_contig1369.2958.1|Name=mRNA_H-canaliculatus_F_contig1369.2958.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=93bp
MECIKLITSSNYMDKRIGYLGLTLLLTDQEEVLMLVTNSLKVDLHSENMF
VVGLSLTTVGNLSTPDIARDLMMEVEKHLRGARPYLVKKVWRC
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016024ARM-type_fold
IPR011989ARM-like
IPR002553Clathrin/coatomer_adapt-like_N