prot_H-canaliculatus_F_contig1367.2949.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1367.2949.1
Unique Nameprot_H-canaliculatus_F_contig1367.2949.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length162
Homology
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1367.2949.1 vs. uniprot
Match: D8LD52_ECTSI (2Fe-2S ferredoxin-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LD52_ECTSI)

HSP 1 Score: 253 bits (647), Expect = 2.920e-84
Identity = 128/162 (79.01%), Postives = 138/162 (85.19%), Query Frame = 0 
Query:    1 MTISARVLIALLVSACSVGAFVPSPAAFRKTHHRTI-DPASSLTPSTARPATKQQHAGPLFMGWGDALGKAFANEDMAPMKNPGLKNEPNTCMVTVNGKTIKAVQGQRLRDVVLAAKAKIEYGCEKGDCGTCESIVDGRKIRICKAIVPRNKTKVNIKTKFG 161
            MT   R+L+AL++S  S  AFVP P+A  K++HR I DPA + T + A     QQHAGPL MGWGDALGKAFANEDMAP KNPGLKN PNTCMVTVNGKTI+AVQGQRLRDVVLAAKAKIEYGCEKGDCGTCESIVDGRKIRICKAIVPRNKTKVNIKTKFG
Sbjct:    1 MTTFTRILVALVLSVSSASAFVPCPSALTKSNHRAIHDPAPAATTAAAPRPRYQQHAGPLLMGWGDALGKAFANEDMAPQKNPGLKNAPNTCMVTVNGKTIQAVQGQRLRDVVLAAKAKIEYGCEKGDCGTCESIVDGRKIRICKAIVPRNKTKVNIKTKFG 162
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1367.2949.1 vs. uniprot
Match: A0A836CBS9_9STRA (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBS9_9STRA)

HSP 1 Score: 111 bits (278), Expect = 5.380e-29
Identity = 51/99 (51.52%), Postives = 67/99 (67.68%), Query Frame = 0 
Query:   61 MGWGDALGKAFANEDMAPMKNPGLKNEPNTCMVTVNGKTIKAVQGQRLRDVVLAAKAKIEYGCEKGDCGTCESIVDGRKIRICKAIVPRNKTKVNIKTK 159
            MG+GDA   AF+NE+    +N GLKN P    V ++GK ++AV GQRL  V  +A  KI Y C+KGDCGTCE++ DG+KIR+C+ IVP N     +KTK
Sbjct:    1 MGFGDAFKNAFSNEEFGAKQNAGLKNGPKYVDVIIDGKKVQAVAGQRLSQVCASAGVKISYNCQKGDCGTCEALGDGKKIRVCQTIVPLNAKSFTVKTK 99
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1367.2949.1 vs. uniprot
Match: A0A4D9DAQ6_9STRA (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DAQ6_9STRA)

HSP 1 Score: 103 bits (258), Expect = 2.390e-25
Identity = 53/105 (50.48%), Postives = 70/105 (66.67%), Query Frame = 0 
Query:   58 PLFMGWGDALGKAFANEDMA-PMKNPGLKNEPNTCMVTVN--GKTIKAVQGQRLRDVVLAAKAKIEYGCEKGDCGTCESIVDGRKIRICKAIVPRN--KTKVNIK 157
            P+ MGW DA+ K F NE+M+ P  N GLKN P T  +T    GK + AV GQ L+DV  AA+  I+Y C+KG+CGTCE +++G+K+R C  IVPR   K +V IK
Sbjct:   45 PVHMGWFDAVKKGFENEEMSQPAPNAGLKNGPPTVSITFMPAGKQVTAVAGQSLKDVAQAARIPIKYNCKKGECGTCEVVLNGKKVRTCVGIVPRGARKNEVTIK 149
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1367.2949.1 vs. uniprot
Match: A0A7S4JWQ5_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JWQ5_9STRA)

HSP 1 Score: 94.4 bits (233), Expect = 9.120e-22
Identity = 41/93 (44.09%), Postives = 64/93 (68.82%), Query Frame = 0 
Query:   63 WGDALGKAFANED-MAPMKNPGLKNEPNTCMVTVNGKTIKAVQGQRLRDVVLAAKAKIEYGCEKGDCGTCESIVDGRKIRICKAIVPRNKTKV 154
            +G+AL  AF+N+D +   +N GLK  P+   VT+NGK +KAV GQ++  V  +A+ KI Y C+KGDCGTCE  ++GR ++ C+ ++P+ K  +
Sbjct:   41 FGNALKGAFSNDDSLGKQQNAGLKGGPDYTEVTINGKQVKAVVGQKVSQVAASARVKISYSCKKGDCGTCEINMNGRVVKACQGVIPKGKCNI 133
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1367.2949.1 vs. uniprot
Match: A0A7S2W1C0_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2W1C0_9STRA)

HSP 1 Score: 94.4 bits (233), Expect = 3.250e-21
Identity = 46/97 (47.42%), Postives = 64/97 (65.98%), Query Frame = 0 
Query:   62 GWGDALGKAFAN-EDMAPMKNPGLKNEPNTC-MVTVNGKTIKAVQGQRLRDVVLAAKAKIEYGCEKGDCGTCESIVDGRKIRICKAIVPRNKTKVNI 156
            G+GDA   AFAN E+M   +N GLKN PN    V++NGK++KA+ GQ+L  V   A+ KI Y C+ G CGTC   V+GR+ + C+A+VP  K  +N+
Sbjct:   91 GFGDAFKSAFANDENMGTAQNAGLKNGPNVNESVSINGKSVKAIVGQKLSVVAAQARVKIPYSCKSGSCGTCVVKVNGRQAKACQAVVPSGKCAINV 187
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1367.2949.1 vs. uniprot
Match: A0A7S1C0U8_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1C0U8_9STRA)

HSP 1 Score: 90.1 bits (222), Expect = 6.180e-20
Identity = 47/111 (42.34%), Postives = 64/111 (57.66%), Query Frame = 0 
Query:   45 STARPATKQQHAGPLFMGWGDALGKAFANEDMAPMKNPGLKNEPNTC-MVTVNGKTIKAVQGQRLRDVVLAAKAKIEYGCEKGDCGTCESIVDGRKIRICKAIVPRNKTKV 154
            S AR    ++  G L M W      AF NED+AP KN GL N P T   VT+NGK +KA+ GQ++  V  AA+ +I + C  GDCGTC   ++GR  + C + +PR K  +
Sbjct:   43 SQARHQRSRRVHGSLKMNW---FADAFKNEDIAPPKNAGLTNGPETNDNVTINGKKVKAITGQKVAVVASAARVRIPFNCNSGDCGTCVIKMNGRNAKACVSKIPRGKCSI 150
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1367.2949.1 vs. uniprot
Match: A0A7R9VC32_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VC32_9STRA)

HSP 1 Score: 86.7 bits (213), Expect = 3.880e-19
Identity = 44/100 (44.00%), Postives = 63/100 (63.00%), Query Frame = 0 
Query:   46 TARPATKQQHAGPLFMGWGDALGKAFAN-EDMAPMKNPGLKNEPNTCMVTVNGKTIKAVQGQRLRDVVLAAKAKIEYGCEKGDCGTCESIVDGRKIRICK 144
            TA P++ Q H       +G+AL  AF N E +   +N GLK  P+   VT+NGK +KAV GQ++  V  +A+ KI Y C+KGDCGTCE  ++GR ++ C+
Sbjct:   10 TATPSSTQLHI------FGNALKNAFGNDESLGERENAGLKGGPDYNEVTINGKPVKAVVGQKVSQVAASARVKITYSCKKGDCGTCEINMNGRVVKACQ 103
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1367.2949.1 vs. uniprot
Match: A0A7S1CYE3_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1CYE3_CYCTE)

HSP 1 Score: 87.0 bits (214), Expect = 9.930e-19
Identity = 46/93 (49.46%), Postives = 59/93 (63.44%), Query Frame = 0 
Query:   63 WGDALGKAFANEDMAPMKNP---GLKNE-PNTCMVTVNGKTIKAVQGQRLRDVVLAAKAKIEYGCEKGDCGTCESIVDGRKIRICKAIVPRNK 151
            +GDAL  AFAN+     KN    GLK   P    VT+NGK IKAV GQ++  V  AA+ KI Y C+KGDCGTCE +++GR  + C+A +P  K
Sbjct:   55 FGDALKGAFANDPTLGKKNKESAGLKGGGPKYDQVTLNGKPIKAVAGQKVSQVAAAARVKITYSCKKGDCGTCEILMNGRMTKACQAKIPAGK 147
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1367.2949.1 vs. uniprot
Match: A0A7S3Q0A3_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q0A3_9STRA)

HSP 1 Score: 86.7 bits (213), Expect = 1.970e-18
Identity = 44/111 (39.64%), Postives = 64/111 (57.66%), Query Frame = 0 
Query:   46 TARPATKQQHAGPLFMGWGDALGKAFANED-MAPMKNPGLKNEPNTC-MVTVNGKTIKAVQGQRLRDVVLAAKAKIEYGCEKGDCGTCESIVDGRKIRICKAIVPRNKTKV 154
            T  P+T  Q +     G+GDA   AFA++D +   +N GL   P T   V++NGK + A+ GQ++  V  +A+ KI Y C KGDCGTC   ++GR  + C+ IVP  K  +
Sbjct:   55 TVLPSTNAQRSVTSLNGFGDAFKNAFASDDSLGKAQNAGLSGGPKTNDNVSINGKKVNAIVGQKVSVVAASARVKISYNCNKGDCGTCNVKINGRVQKACQQIVPAGKCNI 165
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1367.2949.1 vs. uniprot
Match: A0A7R9VKD2_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VKD2_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 7.180e-18
Identity = 40/93 (43.01%), Postives = 56/93 (60.22%), Query Frame = 0 
Query:   63 WGDALGKAFANEDMAPMKNPGLKNEPNTCM-VTVNGKTIKAVQGQRLRDVVLAAKAKIEYGCEKGDCGTCESIVDGRKIRICKAIVPRNKTKV 154
            +G A   AFANED+   +N GL   P T   V+VNGK + AV GQ++  V  AA+ KI Y C  GDCGTC   ++ RK++ C+A +P    ++
Sbjct:   42 FGKAFSDAFANEDVGEKQNAGLTGGPRTNENVSVNGKAVSAVVGQKVSVVAAAARVKIPYNCRNGDCGTCTVKMNNRKVKACQATIPAGNCRI 134
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1367.2949.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LD52_ECTSI2.920e-8479.012Fe-2S ferredoxin-type domain-containing protein n... [more]
A0A836CBS9_9STRA5.380e-2951.522Fe-2S ferredoxin-type domain-containing protein n... [more]
A0A4D9DAQ6_9STRA2.390e-2550.482Fe-2S ferredoxin-type domain-containing protein n... [more]
A0A7S4JWQ5_9STRA9.120e-2244.09Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S2W1C0_9STRA3.250e-2147.42Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A7S1C0U8_9STRA6.180e-2042.34Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A7R9VC32_9STRA3.880e-1944.00Hypothetical protein (Fragment) n=1 Tax=Pseudictyo... [more]
A0A7S1CYE3_CYCTE9.930e-1949.46Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A7S3Q0A3_9STRA1.970e-1839.64Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7R9VKD2_9STRA7.180e-1843.01Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR0010412Fe-2S ferredoxin-type iron-sulfur binding domainPFAMPF00111Fer2coord: 93..139
e-value: 3.1E-6
score: 27.0
IPR012675Beta-grasp domain superfamilyGENE3D3.10.20.30coord: 69..153
e-value: 2.1E-7
score: 32.5
IPR0060582Fe-2S ferredoxin, iron-sulphur binding sitePROSITEPS001972FE2S_FER_1coord: 123..131
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 30..161
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..29
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..29
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..20
score: 0.8
NoneNo IPR availableTMHMMTMhelixcoord: 7..29
IPR0360102Fe-2S ferredoxin-like superfamilySUPERFAMILY542922Fe-2S ferredoxin-likecoord: 69..154

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1367contigH-canaliculatus_F_contig1367:2682..5084 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1367.2949.1mRNA_H-canaliculatus_F_contig1367.2949.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1367 1296..5084 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1367.2949.1 ID=prot_H-canaliculatus_F_contig1367.2949.1|Name=mRNA_H-canaliculatus_F_contig1367.2949.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=162bp
MTISARVLIALLVSACSVGAFVPSPAAFRKTHHRTIDPASSLTPSTARPA
TKQQHAGPLFMGWGDALGKAFANEDMAPMKNPGLKNEPNTCMVTVNGKTI
KAVQGQRLRDVVLAAKAKIEYGCEKGDCGTCESIVDGRKIRICKAIVPRN
KTKVNIKTKFG*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR0360102Fe-2S_ferredoxin-like_sf
IPR0060582Fe2S_fd_BS
IPR012675Beta-grasp_dom_sf
IPR0010412Fe-2S_ferredoxin-type