mRNA_H-canaliculatus_F_contig13665.2946.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig13665.2946.1 vs. uniprot
Match: A0A6H5L4Y0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4Y0_9PHAE) HSP 1 Score: 211 bits (538), Expect = 2.500e-61 Identity = 104/136 (76.47%), Postives = 113/136 (83.09%), Query Frame = 1
Query: 1 LGAGLIKLRGDACWRDLTCMDFHYQTQPNPNPLSRFLHHLPGAGWHKMEVLVNHVVELVLPWCLLLSRRQRSFAGAVQILFQVALVLSGNLSFLNWLTAVPAVFSFDDLHLARLFDPGVVERLVGRLTSLKA-ATP 405
LGAGLIK+RGDACW DLTCM+ HYQTQPNPNPLS +LHHLP A WHK EV+VNH+VELVLPWCLLLSR R AG++QILFQ LV SGNLSFLNWLTAVPAVFSFDDLHLARLF V+ RLV L + A ATP
Sbjct: 185 LGAGLIKVRGDACWWDLTCMEHHYQTQPNPNPLSWYLHHLPSAEWHKAEVVVNHIVELVLPWCLLLSRSPRCVAGSIQILFQAVLVASGNLSFLNWLTAVPAVFSFDDLHLARLFPRPVLRRLVRGLAARAAVATP 320
BLAST of mRNA_H-canaliculatus_F_contig13665.2946.1 vs. uniprot
Match: D7G290_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G290_ECTSI) HSP 1 Score: 180 bits (456), Expect = 7.100e-50 Identity = 98/192 (51.04%), Postives = 107/192 (55.73%), Query Frame = 1
Query: 1 LGAGLIKLRGDACWRDLTCMDFHYQTQPNPNPLSRFLHHLPGAGWHKMEVLVNHVVELVLPWCLLLSRRQRSFAGAVQ--------------------------------------------------------------------ILFQVALVLSGNLSFLNWLTAVPAVFSFDDLHLARLFDPGVVERLV 372
LGAGLIK+RGDACW DLTCM++HYQTQPNPNPLS +LHHLP WHK EV+VNH+VELVLPWCLLLSR R AG++Q ILFQ LV SGNLSFLNWLTAVPAVFSFDDLHLARLF V+ RLV
Sbjct: 144 LGAGLIKVRGDACWWDLTCMEYHYQTQPNPNPLSWYLHHLPSVEWHKAEVVVNHIVELVLPWCLLLSRSPRCVAGSIQPTYLAYLVAHGAAGVDGASVQLFHLTQPQVQVRHGSPPPRIGRRELCLEPGEWPSLAGGRDSRNHSLEILFQAVLVASGNLSFLNWLTAVPAVFSFDDLHLARLFPRPVLRRLV 335
BLAST of mRNA_H-canaliculatus_F_contig13665.2946.1 vs. uniprot
Match: A0A5B8MUY1_9CHLO (Lipase maturation factor n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MUY1_9CHLO) HSP 1 Score: 164 bits (414), Expect = 1.710e-44 Identity = 76/117 (64.96%), Postives = 87/117 (74.36%), Query Frame = 1
Query: 1 LGAGLIKLRGDACWRDLTCMDFHYQTQPNPNPLSRFLHHLPGAGWHKMEVLVNHVVELVLPWCLLLSRRQRSFAGAVQILFQVALVLSGNLSFLNWLTAVPAVFSFDDLHLARLFDP 351
+GAGLIK+RGD+CWRDLTCM+FHY+TQP PNP+S FLHHLP +GWH E NH VELV P L RR R F G VQ+ FQVAL+LSGNLSFLNWLT P + FDD L L+ P
Sbjct: 244 IGAGLIKIRGDSCWRDLTCMNFHYETQPLPNPISYFLHHLP-SGWHAFETAANHTVELVAPLLLFCPRRMRIFGGLVQVGFQVALILSGNLSFLNWLTIAPTMMCFDDYFLLPLYRP 359
BLAST of mRNA_H-canaliculatus_F_contig13665.2946.1 vs. uniprot
Match: A0A6P5A459_BRABE (Lipase maturation factor n=5 Tax=Branchiostoma TaxID=7737 RepID=A0A6P5A459_BRABE) HSP 1 Score: 162 bits (411), Expect = 2.870e-44 Identity = 78/118 (66.10%), Postives = 90/118 (76.27%), Query Frame = 1
Query: 1 LGAGLIKLRGDACWRDLTCMDFHYQTQPNPNPLSRFLHHLPGAGWHKMEVLVNHVVELVLPWCLLLSRRQRSFAGAVQILFQVALVLSGNLSFLNWLTAVPAVFSFDDLHLARLFDPG 354
LGAGLIK+RGD CWRDLTCM++HYQTQP PNPLS +LH P A HK E L NH +ELV PW + L+R R G +QILFQV L+LSGNLSFLNWLT +P++ SFDD HLA LF G
Sbjct: 235 LGAGLIKIRGDQCWRDLTCMNYHYQTQPVPNPLSYYLHQTPEA-MHKFETLSNHFIELVAPWFIFLTRPFRFTCGFLQILFQVVLILSGNLSFLNWLTILPSICSFDDAHLACLFPGG 351
BLAST of mRNA_H-canaliculatus_F_contig13665.2946.1 vs. uniprot
Match: UPI000FFB5335 (lipase maturation factor 1 isoform X4 n=1 Tax=Falco peregrinus TaxID=8954 RepID=UPI000FFB5335) HSP 1 Score: 157 bits (397), Expect = 1.400e-43 Identity = 77/129 (59.69%), Postives = 95/129 (73.64%), Query Frame = 1
Query: 1 LGAGLIKLRGDACWRDLTCMDFHYQTQPNPNPLSRFLHHLPGAGWHKMEVLVNHVVELVLPWCLLLSRRQRSFAGAVQILFQVALVLSGNLSFLNWLTAVPAVFSFDDLHLARLFD--PGVVERLVGRL 381
LGAGLIK+RGD CWR+LTCMD+HY+TQP PNP++ F+HH P +H+ E LVNH +ELV+P+ L L RR G +QILFQV L++SGNLSFLNWLT VP++ FDD LA LF PG + GRL
Sbjct: 98 LGAGLIKIRGDRCWRELTCMDYHYETQPVPNPIAYFMHHSPW-WFHRFETLVNHFIELVVPFFLFLGRRMCIVHGLLQILFQVLLIVSGNLSFLNWLTIVPSIACFDDASLAFLFSSRPGGLGERAGRL 225
BLAST of mRNA_H-canaliculatus_F_contig13665.2946.1 vs. uniprot
Match: UPI00140CF8C3 (lipase maturation factor 1 isoform X2 n=1 Tax=Catharus ustulatus TaxID=91951 RepID=UPI00140CF8C3) HSP 1 Score: 156 bits (395), Expect = 2.660e-43 Identity = 75/122 (61.48%), Postives = 92/122 (75.41%), Query Frame = 1
Query: 1 LGAGLIKLRGDACWRDLTCMDFHYQTQPNPNPLSRFLHHLPGAGWHKMEVLVNHVVELVLPWCLLLSRRQRSFAGAVQILFQVALVLSGNLSFLNWLTAVPAVFSFDDLHLARLFDPGVVER 366
LGAGLIK+RGD CWR+LTCMD+HY+TQP PNP+S F+H P +H++E L NH VEL++P+ LLL RR G +QILFQV L+LSGNLSFLNWLT VP++ FDD L LF G+ ER
Sbjct: 53 LGAGLIKIRGDRCWRELTCMDYHYETQPVPNPISYFMHRSPW-WFHRLETLFNHFVELLVPFFLLLGRRMSILHGLLQILFQVLLILSGNLSFLNWLTVVPSLACFDDASLGFLFGSGLRER 173
BLAST of mRNA_H-canaliculatus_F_contig13665.2946.1 vs. uniprot
Match: A0A0G4GBJ8_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4GBJ8_VITBC) HSP 1 Score: 160 bits (406), Expect = 3.030e-43 Identity = 85/136 (62.50%), Postives = 102/136 (75.00%), Query Frame = 1
Query: 1 LGAGLIKLRGDACWRDLTCMDFHYQTQPNPNPLSRFLHHLPGAGWHKMEVLVNHVVELVLPWCLLLSRRQ-RSFAGAVQILFQVALVLSGNLSFLNWLTAVPAVFSFDDLHLARLFDPGVVERLVGRLTSLKAATP 405
LGAGLIKLRGD CWRDLTCM++HYQTQP PNP+S +LHH P +H E LVNH+VE L + LL+ RQ R GAVQILFQ+ L++SGNLSFLNWLT +PA+F FDDL L+ LF V+R V +LTS K+ P
Sbjct: 200 LGAGLIKLRGDPCWRDLTCMEYHYQTQPVPNPVSWYLHHNPQE-FHWAETLVNHIVECCLSFNLLIPLRQCRLLGGAVQILFQMMLIVSGNLSFLNWLTILPAIFCFDDLSLSFLFPKATVDR-VRQLTSGKSPPP 333
BLAST of mRNA_H-canaliculatus_F_contig13665.2946.1 vs. uniprot
Match: UPI000FFB51EC (lipase maturation factor 1 isoform X1 n=4 Tax=Falco TaxID=8952 RepID=UPI000FFB51EC) HSP 1 Score: 157 bits (397), Expect = 3.660e-43 Identity = 77/129 (59.69%), Postives = 95/129 (73.64%), Query Frame = 1
Query: 1 LGAGLIKLRGDACWRDLTCMDFHYQTQPNPNPLSRFLHHLPGAGWHKMEVLVNHVVELVLPWCLLLSRRQRSFAGAVQILFQVALVLSGNLSFLNWLTAVPAVFSFDDLHLARLFD--PGVVERLVGRL 381
LGAGLIK+RGD CWR+LTCMD+HY+TQP PNP++ F+HH P +H+ E LVNH +ELV+P+ L L RR G +QILFQV L++SGNLSFLNWLT VP++ FDD LA LF PG + GRL
Sbjct: 98 LGAGLIKIRGDRCWRELTCMDYHYETQPVPNPIAYFMHHSPW-WFHRFETLVNHFIELVVPFFLFLGRRMCIVHGLLQILFQVLLIVSGNLSFLNWLTIVPSIACFDDASLAFLFSSRPGGLGERAGRL 225
BLAST of mRNA_H-canaliculatus_F_contig13665.2946.1 vs. uniprot
Match: A0A850ZXQ1_9PASS (Lipase maturation factor (Fragment) n=1 Tax=Tichodroma muraria TaxID=237442 RepID=A0A850ZXQ1_9PASS) HSP 1 Score: 153 bits (386), Expect = 6.260e-43 Identity = 72/123 (58.54%), Postives = 92/123 (74.80%), Query Frame = 1
Query: 1 LGAGLIKLRGDACWRDLTCMDFHYQTQPNPNPLSRFLHHLPGAGWHKMEVLVNHVVELVLPWCLLLSRRQRSFAGAVQILFQVALVLSGNLSFLNWLTAVPAVFSFDDLHLARLFDPGVVERL 369
LGAGLIK+RGD CWR+LTCMD+HY+TQP PNP+S F+H P +H++E LVNH +EL++P+ LLL RR G +Q+LFQV L++SGNLSFLNWLT VP+ FDD L LF + ER+
Sbjct: 48 LGAGLIKIRGDRCWRELTCMDYHYETQPVPNPISYFMHRSPW-WFHRLEALVNHFIELLVPFFLLLGRRMSILHGLLQVLFQVLLIVSGNLSFLNWLTMVPSFACFDDASLGLLFGSRLRERV 169
BLAST of mRNA_H-canaliculatus_F_contig13665.2946.1 vs. uniprot
Match: A0A3P4RYD6_GULGU (Lipase maturation factor n=2 Tax=Mustelidae TaxID=9655 RepID=A0A3P4RYD6_GULGU) HSP 1 Score: 154 bits (389), Expect = 8.140e-43 Identity = 77/119 (64.71%), Postives = 89/119 (74.79%), Query Frame = 1
Query: 1 LGAGLIKLRGDACWRDLTCMDFHYQTQPNPNPLSRFLHHLPGAGW-HKMEVLVNHVVELVLPWCLLLSRRQRSFAGAVQILFQVALVLSGNLSFLNWLTAVPAVFSFDDLHLARLFDPG 354
LGAGLIK+RGD CWRDLTCMDFHY+TQP PNP++ FLH P W H+ E L NH +ELV+P+ L L RR + GA+QILFQV LV+SGNLSFLNWLT VP+V FDD L LF G
Sbjct: 2 LGAGLIKIRGDRCWRDLTCMDFHYETQPVPNPVAYFLHQSPW--WVHRFETLSNHFLELVVPFFLFLGRRMCTVHGALQILFQVVLVISGNLSFLNWLTMVPSVACFDDATLGFLFPSG 118 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig13665.2946.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig13665.2946.1 >prot_H-canaliculatus_F_contig13665.2946.1 ID=prot_H-canaliculatus_F_contig13665.2946.1|Name=mRNA_H-canaliculatus_F_contig13665.2946.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=161bp LGAGLIKLRGDACWRDLTCMDFHYQTQPNPNPLSRFLHHLPGAGWHKMEVback to top mRNA from alignment at H-canaliculatus_F_contig13665:419..2913- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig13665.2946.1 ID=mRNA_H-canaliculatus_F_contig13665.2946.1|Name=mRNA_H-canaliculatus_F_contig13665.2946.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=2495bp|location=Sequence derived from alignment at H-canaliculatus_F_contig13665:419..2913- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig13665:419..2913- >mRNA_H-canaliculatus_F_contig13665.2946.1 ID=mRNA_H-canaliculatus_F_contig13665.2946.1|Name=mRNA_H-canaliculatus_F_contig13665.2946.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=966bp|location=Sequence derived from alignment at H-canaliculatus_F_contig13665:419..2913- (Hapterophycus canaliculatus Oshoro5f female)back to top |