mRNA_H-canaliculatus_F_contig13639.2930.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig13639.2930.1
Unique NamemRNA_H-canaliculatus_F_contig13639.2930.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
BLAST of mRNA_H-canaliculatus_F_contig13639.2930.1 vs. uniprot
Match: A0A6H5JBB4_9PHAE (Subtilisin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBB4_9PHAE)

HSP 1 Score: 413 bits (1061), Expect = 5.240e-136
Identity = 201/247 (81.38%), Postives = 228/247 (92.31%), Query Frame = 1
Query:    1 QYECDVYWDNICLSDDRSETLEDAKGVAPGAQLAILDLGTSDRLYQALGGTMWEAAAGTGARLHSASWGFPDDPCTVDEAAVSFDQWAYENPEHLLVFAAGNLGDDMSGCSIASPSVSKNSLAVGSSMSGAVRLSSGDMDDVSDFSSKGPTSDGRIKPDVLAPGHYIFSAANGGDGSCELDRNSGTSMSCPVAAGAAALVRQYVVDGFYADDLKARGGLCDS-ENPAWACDSFSPSGALVKVT-CAR 735
            +Y+CDVYW+  CLSDDRSETLEDAKGVAPGA+LA+LDLG+SD L QALGGTMWE +AGTGAR+HSASWGF D+PCTVD+++VSFDQWAYENPEHLLVFAAGNLGDDM+GCSIASP+VSKN LAVGSSMSG +RLS GDMD+VSDFSS GPT+D RIKPD+LAPGHYIFSA+NGGDGSC+LDRNSGTSMSCP+AAGAAALVRQY+VDGFYA+D+ ARG LC +  +PAWACD+FSPSGALVKV  C R
Sbjct:  617 EYDCDVYWEAACLSDDRSETLEDAKGVAPGAKLAVLDLGSSDSLEQALGGTMWEVSAGTGARIHSASWGFIDEPCTVDDSSVSFDQWAYENPEHLLVFAAGNLGDDMTGCSIASPAVSKNCLAVGSSMSGELRLSPGDMDEVSDFSSMGPTTDDRIKPDILAPGHYIFSASNGGDGSCQLDRNSGTSMSCPIAAGAAALVRQYLVDGFYAEDVGARGSLCAAGTDPAWACDAFSPSGALVKVMDCLR 863          
BLAST of mRNA_H-canaliculatus_F_contig13639.2930.1 vs. uniprot
Match: D8LK25_ECTSI (Subtilisin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK25_ECTSI)

HSP 1 Score: 411 bits (1056), Expect = 3.970e-132
Identity = 199/253 (78.66%), Postives = 228/253 (90.12%), Query Frame = 1
Query:    1 QYECDVYWDNICLSDDRSETLEDAKGVAPGAQLAILDLGTSDRLYQALGGTMWEAAAGTGARLHSASWGFPDDPCTVDEAAVSFDQWAYENPEHLLVFAAGNLGDDMSGCSIASPSVSKNSLAVGSSMSGAVRLSSGDMDDVSDFSSKGPTSDGRIKPDVLAPGHYIFSAANGGDGSCELDRNSGTSMSCPVAAGAAALVRQYVVDGFYADDLKARGGLCDSE-NPAWACDSFSPSGALVKVTCARKWDSGGG 756
            +Y+CDVYW+  CLSDDRSETLEDAKGVAPGA+LA+LDLG+SD L QALGGTMWE +AGTGAR+HSASWGF D+PCTVD++AVSFD+WAYENPEHLLVFAAGNLGDDM GCSIASP++SKN LAVGSSMSG +RLS GD+D+VSDFSS GPT+D RIKPD+LAPGHYIFSA+NGG+GSC+LDRNSGTSMSCP+AAGAAALVRQY+VDGFYADD+ ARG LC +  +PAWACD+FSPSGALVK       D+ GG
Sbjct:  528 KYDCDVYWETACLSDDRSETLEDAKGVAPGAKLAVLDLGSSDSLEQALGGTMWEVSAGTGARIHSASWGFIDEPCTVDDSAVSFDEWAYENPEHLLVFAAGNLGDDMEGCSIASPALSKNCLAVGSSMSGELRLSPGDLDEVSDFSSLGPTTDDRIKPDILAPGHYIFSASNGGEGSCQLDRNSGTSMSCPIAAGAAALVRQYLVDGFYADDVAARGSLCAAATDPAWACDAFSPSGALVKALLIHGADAMGG 780          
BLAST of mRNA_H-canaliculatus_F_contig13639.2930.1 vs. uniprot
Match: D8LBZ2_ECTSI (Subtilisin (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBZ2_ECTSI)

HSP 1 Score: 188 bits (478), Expect = 2.760e-52
Identity = 127/262 (48.47%), Postives = 159/262 (60.69%), Query Frame = 1
Query:    7 ECDVYWDNICLSDDRSETLEDAKGVAPGAQLAILDLGTSDRL---YQALGGTMWEAAAGTGARLHSASWGFPDDPCTVDEAAVSFDQWAYENPEHLLVFAAGNLGDDMSGCSIASPSVSKNSLAVGSSMSGAVRLSSGDMD-DVSD-------------FSSKGPTSDGRIKPDVLAPGHYIFSAANGGDGS--CELDRNSGTSMSCPVAAGAAALVRQYVV-DGFYADDLKARGGLCDSENPAWACDSFSPSGALVKVTCA 732
            +CD   +  CL DD +ETL+   GVA GAQLAI D+   D      +  G  MWE A   G++L S SWG     C      V +D + Y N + LL+FAAGN G++ SGC++ SP+V+KN LAVG+S SG  RLS  D D D +D             FSS GPT DGRIKP+V+APG  I+SAA GGDG+  C L + +GTSMS PV AGAAALVRQY   + FY  D++ RG  CDS    + C+ F+PS A VKVT A
Sbjct:  369 DCDDRPEEYCLGDDEAETLQQHGGVARGAQLAIFDI-LDDYTGIGIEMAGNGMWEPAMEAGSKLSSNSWGIYAY-CEYLSYDVLYDDFMYRNQDQLLLFAAGNDGEEWSGCTMGSPAVAKNVLAVGASTSGPGRLSFTDEDGDPTDGDSRVQDIDAMAYFSSFGPTLDGRIKPEVVAPGDMIYSAAGGGDGNYTCRLWQYAGTSMSTPVVAGAAALVRQYFKNETFYTHDVEERG-FCDS----FGCEPFAPSAATVKVTHA 623          
BLAST of mRNA_H-canaliculatus_F_contig13639.2930.1 vs. uniprot
Match: A0A2I6U1R2_SACJA (Subtilisin (Fragment) n=1 Tax=Saccharina japonica TaxID=88149 RepID=A0A2I6U1R2_SACJA)

HSP 1 Score: 185 bits (469), Expect = 5.650e-50
Identity = 118/262 (45.04%), Postives = 155/262 (59.16%), Query Frame = 1
Query:    7 ECDVYWDNICLSDDRSETLEDAKGVAPGAQLAILDL---GTSDRLYQALGGTMWEAAAGTGARLHSASWGFPDDPCTVDEAAVSFDQWAYENPEHLLVFAAGNLGDDMSG---CSIASPSVSKNSLAVGSSMSGAVRLSS--------------GDMDDVSDFSSKGPTSDGRIKPDVLAPGHYIFSAANGGDG--SCELDRNSGTSMSCPVAAGAAALVRQYVVD-GFYADDLKARGGLCDSENPAWACDSFSPSGALVKV 723
            +CD   D  CLSDD  +TL D  G+A GA+LA  D+   G+S   +  +G  +WE     G ++HS S G  D  C+V E  V +D + Y NPE+L+V AAGN GD   G   C++ SP++ KN+LAVG++ SG  R++                D+D V+ FSS GPT DGRIKP+V+APG  I+SA + G    SC L   SGTSM+CP+ AGA+A+VRQY +D  FY  D  ARG   DS      C+SFSPS A VK 
Sbjct:  488 DCDDATDPRCLSDDVGQTLADHGGMAQGAKLAFFDVFADGSSGTHF--VGNGLWEPCLEAGCKIHSMSIG-ADFECSVCEKDVLYDDFMYNNPENLVVVAAGNAGDTEDGRTVCTMYSPAIGKNALAVGATSSGETRITKTSADGDLIDGTNGYADVDTVAQFSSYGPTQDGRIKPEVVAPGDAIYSARSDGSDNHSCRLSAKSGTSMACPIVAGASAMVRQYFMDESFYVADQAARGWSDDSGR---RCESFSPSSATVKA 743          
BLAST of mRNA_H-canaliculatus_F_contig13639.2930.1 vs. uniprot
Match: A0A6H5K229_9PHAE (Subtilisin n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K229_9PHAE)

HSP 1 Score: 185 bits (469), Expect = 8.160e-50
Identity = 120/249 (48.19%), Postives = 157/249 (63.05%), Query Frame = 1
Query:    4 YECDVYWDNICLSDDRSETLEDAKGVAPGAQLAILDLGTSD-RLYQALGGTMWEAAAGTGARLHSASWGFPDDPCTVDEAAVSFDQWAYENPEHLLVFAAGNLGD-DMSGCSIASPSVSKNSLAVGSSMSGAVRLSSGD----MDDVSDFSSKGPTSDGRIKPDVLAPGHYIFSAANGGDGS--CELDRNSGTSMSCPVAAGAAALVRQYVVDG-FYADDLKARGGLCDSENPAWACDSFSPSGALVKV 723
            Y CD   D  CLSD+  ETL    G+A GA+L+I D+      L + LG  +WE     G ++HS S G  D  CT  E+ + +D + YENPE+LL+FAAGN G+ + S C++ASP++ KN LAVG+S SG  R+ S +    +D V+DFSS G T+DGRIKP+V+APG  ++SAA+ G  S  C L    GTSMSCP+ AGAAA+VRQY VD  FY  D+ ARG   D     + C+ FSPS A VK 
Sbjct:  539 YGCDGSTDP-CLSDEVDETLTKNGGMAQGAKLSIFDVFFEVFGLIEVLGNGVWEPCLEAGCKVHSLSLG-GDTLCTPGESEILYDDFMYENPENLLIFAAGNDGETERSVCTMASPAIGKNVLAVGASTSGDTRVISTEGGAGIDMVADFSSYGFTTDGRIKPEVVAPGDMVYSAASDGTDSHSCRLWAYQGTSMSCPIVAGAAAMVRQYFVDETFYTADVTARGFCSDG----FICEGFSPSAATVKA 781          
BLAST of mRNA_H-canaliculatus_F_contig13639.2930.1 vs. uniprot
Match: A0A6H5K365_9PHAE (Subtilisin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K365_9PHAE)

HSP 1 Score: 183 bits (464), Expect = 9.970e-50
Identity = 117/251 (46.61%), Postives = 154/251 (61.35%), Query Frame = 1
Query:    4 YECDVYWDNICLSDDRSETLEDAKGVAPGAQLAILDLGTSDRLYQA---LGGTMWEAAAGTGARLHSASWGFPDDPCTVDEAAVSFDQWAYENPEHLLVFAAGNLG-DDMSGCSIASPSVSKNSLAVGSSMSGAVRLSSG----DMDDVSDFSSKGPTSDGRIKPDVLAPGHYIFSAANGGDG--SCELDRNSGTSMSCPVAAGAAALVRQYVVDG-FYADDLKARGGLCDSENPAWACDSFSPSGALVKV 723
            Y CD   D  CLSDD  ETL +  G+A GA+LAI D+   D  Y A   +G  +WE     G +LHS S G  D  C++    +  DQ+ YEN EHLL+FAAGN G ++ S C+I +P + KNSLA+G+S SG  R+ S      ++ V++FSS G T+D RIKP+V+APG  ++SAA+ G    SC L    GTSMSCP+ AGAAA++RQY +D  FY  D+ ARG   D     + C+ FSPS A VK 
Sbjct:  263 YGCDNSTDTTCLSDDVPETLSNNGGMAQGAKLAIFDVFYGD--YDASSSIGNNLWEVCTEAGCKLHSNSLG-ADFECSIASWDILNDQFMYENAEHLLIFAAGNEGGEERSTCTINTPGIGKNSLAIGASTSGDTRVISTVGATGINTVAEFSSWGFTTDDRIKPEVVAPGDSVYSAASDGTDTHSCRLWAYEGTSMSCPIVAGAAAMIRQYFMDETFYMADVTARGFCSD----VFICEGFSPSAATVKA 506          
BLAST of mRNA_H-canaliculatus_F_contig13639.2930.1 vs. uniprot
Match: D8LQI1_ECTSI (Subtilisin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQI1_ECTSI)

HSP 1 Score: 184 bits (466), Expect = 2.110e-49
Identity = 115/249 (46.18%), Postives = 152/249 (61.04%), Query Frame = 1
Query:   34 CLSDDRSETLEDAKGVAPGAQLAILDLGTSDRLYQALGGT-MWEAAAGTGARLHSASWGFPDDPCTVDEAAVSFDQWAYENPEHLLVFAAGNLG--DDMSGCSIASPSVSKNSLAVGSSMSGAVRLSSGDMDD--------------VSDFSSKGPTSDGRIKPDVLAPGHYIFSAA-NGGDGSCELDRNSGTSMSCPVAAGAAALVRQYVVDG-FYADDLKARGGLCDSENPAWACDSFSPSGALVKV 723
            CL DD ++TL +  G+A GA++A +D+   D  Y  L G  +WE  A  G ++HS S+G  D  C +    V +D++ YEN EHLL+F+AGN G   D   C+I SP ++KN L VGS+ SG  RLS+ D+D               VS+FS  G T DGRIKP+V+APG  I+SA+ NGGD SCEL   +GTS S  VA+GAAA+VRQY  D  FY+ D+++RG  CD     + CDSFSP    VK 
Sbjct:  537 CLPDDTADTLSEHGGMAQGAKIAAIDVFYGDYSYGDLAGNGLWETCADAGCKIHSNSYGV-DLRCQLTALDVLYDEYMYENQEHLLLFSAGNTGWTTDRDTCTIDSPGIAKNVLTVGSTSSGVTRLSTTDLDGRGYADGDELSTIDVVSEFSGYGFTEDGRIKPEVVAPGDMIYSASGNGGDSSCELIAYAGTSFSTAVASGAAAMVRQYFRDSSFYSADVESRG-FCDQ---GFTCDSFSPMATTVKA 780          
BLAST of mRNA_H-canaliculatus_F_contig13639.2930.1 vs. uniprot
Match: A0A6H5JKA8_9PHAE (Subtilisin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKA8_9PHAE)

HSP 1 Score: 183 bits (465), Expect = 3.270e-49
Identity = 123/259 (47.49%), Postives = 156/259 (60.23%), Query Frame = 1
Query:    7 ECDVYWDNICLSDDRSETLEDAKGVAPGAQLAILDLGTSDRLYQAL---GGTMWEAAAGTGARLHSASWGFPDDPCTVDEAAVSFDQWAYENPEHLLVFAAGNLGDDMSGCSIASPSVSKNSLAVGSSMSGAVRLSSGDMD-DVSD-------------FSSKGPTSDGRIKPDVLAPGHYIFSAANGGDGS--CELDRNSGTSMSCPVAAGAAALVRQYVV-DGFYADDLKARGGLCDSENPAWACDSFSPSGALVKV 723
            +CD   +  CL DD +ETL+   GVA GAQLAI D+  +D     +   G  MWE A   G++L S SWG     C      V FD + Y N + LL+FAAGN GDD SGC++ +P+++KN LAVG+S SG  RLS  D D D +D             FSS GPT D RIKP+V+APG  I+SAA  GDG+  C L + +GTSMS P+ AGAAALVRQY   + FYA D++ RG  CDS    + C+ F+PS A VK 
Sbjct:  652 DCDDLPEEYCLGDDEAETLQQHGGVARGAQLAIFDI-INDYTGVGIDMAGNGMWEPAMEAGSKLSSNSWGIYAY-CDYLSLDVLFDDFMYRNQDQLLLFAAGNDGDDWSGCTMGTPALAKNVLAVGASTSGPGRLSFTDEDGDPTDGDSRVQDIDAMAYFSSFGPTLDNRIKPEVVAPGDMIYSAAGSGDGNYTCRLWQYAGTSMSTPIVAGAAALVRQYFKNETFYAHDVEERG-FCDS----FGCEPFAPSAATVKA 903          
BLAST of mRNA_H-canaliculatus_F_contig13639.2930.1 vs. uniprot
Match: D8LNG4_ECTSI (Subtilisin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNG4_ECTSI)

HSP 1 Score: 182 bits (461), Expect = 3.410e-49
Identity = 118/250 (47.20%), Postives = 159/250 (63.60%), Query Frame = 1
Query:    4 YECDVYWDNICLSDDRSETLEDAKGVAPGAQLAILD-LGTSDRLYQALGGTMWEAAAGTGARLHSASWGFPDDPCTVDEAAVSFDQWAYENPEHLLVFAAGNLGD-DMSGCSIASPSVSKNSLAVGSSMSGAVRLSS---GDMDDVSDFSSKGPTSDGRIKPDVLAPGHYIFSAANGGD---GSCELDRNSGTSMSCPVAAGAAALVRQYVV-DGFYADDLKARGGLCDSENPAWA-CDSFSPSGALVKV 723
            Y+CD    + CLSDD +ETL +  G+A GA+LAI D    +  L   +G  +WE  A    ++HS S+G  D  C++    V +D+W   NPE+LL+FAAGN G+   S C+I SP+++KN LAVG+S SG  RLS+     +D V+ FSS GPTSD RIKP+VLAPG  I+SAA+ G     SC L    GTSMS P+ AGA+A++RQY + + F+A D+ ARG  CD     WA C++FSPS A +K 
Sbjct:  255 YDCDGLETDKCLSDDVAETLTNNGGMAQGAKLAIFDAFYDTFGLSPFVGTGLWEPCADADCKIHSNSYG-GDFECSLGSNDVLYDEWMVSNPENLLIFAAGNDGELRRSTCTIGSPAIAKNVLAVGASTSGDTRLSATPGSGIDTVAVFSSYGPTSDSRIKPEVLAPGDAIYSAASDGSVDTHSCRLWAYVGTSMSTPIVAGASAMIRQYFMNETFFATDMTARG-FCDE----WAGCEAFSPSSATLKA 498          
BLAST of mRNA_H-canaliculatus_F_contig13639.2930.1 vs. uniprot
Match: A0A6H5L2G3_9PHAE (Subtilisin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2G3_9PHAE)

HSP 1 Score: 181 bits (459), Expect = 3.540e-49
Identity = 114/249 (45.78%), Postives = 150/249 (60.24%), Query Frame = 1
Query:   34 CLSDDRSETLEDAKGVAPGAQLAILDLGTSDRLYQALGGT-MWEAAAGTGARLHSASWGFPDDPCTVDEAAVSFDQWAYENPEHLLVFAAGNLG--DDMSGCSIASPSVSKNSLAVGSSMSGAVRLSSGDMDD--------------VSDFSSKGPTSDGRIKPDVLAPGHYIFSAA-NGGDGSCELDRNSGTSMSCPVAAGAAALVRQYVVDG-FYADDLKARGGLCDSENPAWACDSFSPSGALVKV 723
            CL DD + TL +  G+A GA++A +D+   D  Y  L G  +WE  A  G ++HS S+G  D  C +    V +D++ YEN EHLL+F+AGN G   D   C+I SP ++KN L VGS+ SG  RLS+ D+D               VS+FS  G T DGRIKP+V+APG  I+SA+ NGG+ SCEL   +GTS S  VA+GAAA+VRQY  D  FY  D+++RG  CD     + CDSFSP    VK 
Sbjct:  226 CLPDDTANTLSEHGGMAQGAKIAAIDIFYGDYSYGDLAGNGLWETCADAGCKIHSNSYGV-DLRCQLTALDVLYDEYMYENQEHLLLFSAGNTGWTTDRDTCTIDSPGIAKNVLTVGSTSSGVTRLSTTDLDGRGYADGDELSTIDVVSEFSGYGFTEDGRIKPEVVAPGDMIYSASGNGGNSSCELIAYAGTSFSTAVASGAAAMVRQYFRDSSFYGADVESRG-FCDQ---GFTCDSFSPMATTVKA 469          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig13639.2930.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JBB4_9PHAE5.240e-13681.38Subtilisin n=1 Tax=Ectocarpus sp. CCAP 1310/34 Tax... [more]
D8LK25_ECTSI3.970e-13278.66Subtilisin n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
D8LBZ2_ECTSI2.760e-5248.47Subtilisin (Fragment) n=1 Tax=Ectocarpus siliculos... [more]
A0A2I6U1R2_SACJA5.650e-5045.04Subtilisin (Fragment) n=1 Tax=Saccharina japonica ... [more]
A0A6H5K229_9PHAE8.160e-5048.19Subtilisin n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A... [more]
A0A6H5K365_9PHAE9.970e-5046.61Subtilisin n=1 Tax=Ectocarpus sp. CCAP 1310/34 Tax... [more]
D8LQI1_ECTSI2.110e-4946.18Subtilisin n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
A0A6H5JKA8_9PHAE3.270e-4947.49Subtilisin n=1 Tax=Ectocarpus sp. CCAP 1310/34 Tax... [more]
D8LNG4_ECTSI3.410e-4947.20Subtilisin n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
A0A6H5L2G3_9PHAE3.540e-4945.78Subtilisin n=1 Tax=Ectocarpus sp. CCAP 1310/34 Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig13639contigH-canaliculatus_F_contig13639:776..2987 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score188.3
Seed ortholog evalue4.2e-45
Seed eggNOG ortholog2880.D8LNG5
EggNOG free text desc.tripeptidyl-peptidase activity
EggNOG OGsCOG1404@1,KOG1114@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionKP-43 peptidase
Ec32 orthologEc-06_007900.1
Exons4
Model size756
Cds size756
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig13639.2930.1prot_H-canaliculatus_F_contig13639.2930.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig13639 776..2987 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929105.7090943-CDS-H-canaliculatus_F_contig13639:775..10451622929105.7090943-CDS-H-canaliculatus_F_contig13639:775..1045Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig13639 776..1045 +
1696845681.019355-CDS-H-canaliculatus_F_contig13639:775..10451696845681.019355-CDS-H-canaliculatus_F_contig13639:775..1045Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig13639 776..1045 +
1622929105.723796-CDS-H-canaliculatus_F_contig13639:1641..18691622929105.723796-CDS-H-canaliculatus_F_contig13639:1641..1869Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig13639 1642..1869 +
1696845681.0333161-CDS-H-canaliculatus_F_contig13639:1641..18691696845681.0333161-CDS-H-canaliculatus_F_contig13639:1641..1869Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig13639 1642..1869 +
1622929105.7364628-CDS-H-canaliculatus_F_contig13639:2459..25331622929105.7364628-CDS-H-canaliculatus_F_contig13639:2459..2533Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig13639 2460..2533 +
1696845681.0468893-CDS-H-canaliculatus_F_contig13639:2459..25331696845681.0468893-CDS-H-canaliculatus_F_contig13639:2459..2533Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig13639 2460..2533 +
1622929105.7500446-CDS-H-canaliculatus_F_contig13639:2803..29871622929105.7500446-CDS-H-canaliculatus_F_contig13639:2803..2987Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig13639 2804..2987 +
1696845681.056462-CDS-H-canaliculatus_F_contig13639:2803..29871696845681.056462-CDS-H-canaliculatus_F_contig13639:2803..2987Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig13639 2804..2987 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig13639.2930.1

>prot_H-canaliculatus_F_contig13639.2930.1 ID=prot_H-canaliculatus_F_contig13639.2930.1|Name=mRNA_H-canaliculatus_F_contig13639.2930.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=252bp
QYECDVYWDNICLSDDRSETLEDAKGVAPGAQLAILDLGTSDRLYQALGG
TMWEAAAGTGARLHSASWGFPDDPCTVDEAAVSFDQWAYENPEHLLVFAA
GNLGDDMSGCSIASPSVSKNSLAVGSSMSGAVRLSSGDMDDVSDFSSKGP
TSDGRIKPDVLAPGHYIFSAANGGDGSCELDRNSGTSMSCPVAAGAAALV
RQYVVDGFYADDLKARGGLCDSENPAWACDSFSPSGALVKVTCARKWDSG
GG
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mRNA from alignment at H-canaliculatus_F_contig13639:776..2987+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig13639.2930.1 ID=mRNA_H-canaliculatus_F_contig13639.2930.1|Name=mRNA_H-canaliculatus_F_contig13639.2930.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=2212bp|location=Sequence derived from alignment at H-canaliculatus_F_contig13639:776..2987+ (Hapterophycus canaliculatus Oshoro5f female)
CAGTACGAGTGCGACGTGTACTGGGACAACATCTGCCTCTCGGACGATCG CTCCGAGACCCTGGAAGACGCCAAGGGCGTCGCCCCCGGCGCGCAGCTCG CCATCCTCGACCTTGGCACGTCGGACAGGCTGTACCAGGCCCTGGGCGGG ACGATGTGGGAGGCCGCCGCAGGCACGGGCGCGCGGCTCCACTCCGCGTC TTGGGGCTTTCCCGACGACCCGTGCACGGTGGACGAGGCGGCGGTTTCGT TCGACCAGTGGGCGTACGAGGTGAGTAGGGCAGGGGGGACAGGCGGTGGT GCGGCGGGGGTCGGAAAACGACGGGGGCAGGGCGCGGGGGTTCGCTTCAG ATTTTTGGTGTTGTTTGGTGGAGGGAGGCATGTTCGTATAATGATTGGTT GGTGTGGCGGGCAGGCCGTAGCTTGGATCTCTTTTATCCCCTGACGTTGT TCTTTGTGCGATCGTAGTGGAGGGACATGAGGAGGGAGATGGTCCCGTGT AGCTCTCGGGCGAGAACCTCTCAACCCCCGAGCACGCGCTGTTCTTGATG GCCACTGCCTTCCTCACACACAGTATTTTGGGCCGTCTTGATCGTGGTGG CACGTTCTGCAGCTCACGTCGCCCCCCTCCCGCCCGCGGAGCACCCGCCG CCGCCAGAACCCCGAGAACTTGCTGGAGGTGGTGGACTCTGTGCCTCTGT ACTTGCTCTGCTGCCACGCCCCCCCCCCCCCCCCCCCCCCCCCGCGCCCC CCCCCCCCCCCCCCCCCCGAAGACCTTGCGGGGGGGGGGGGGTCTTGGCC CTCTTTCTTTTTCCGCTTTCCCCCCCCCCCCCCCCCCCCCCCCCCCTTCC CTCCGCTTTTCCTCAGAACCCGGAGCACCTCCTCGTCTTCGCCGCGGGCA ACCTGGGCGACGACATGTCCGGCTGCAGCATCGCGTCGCCCTCCGTGTCC AAGAACTCCCTCGCGGTAGGCTCGAGCATGTCAGGGGCCGTCCGCCTCTC CTCCGGAGACATGGACGACGTGTCCGACTTCAGCAGCAAGGGTCCCACCT CGGACGGGAGGATCAAGCCGGACGTGCTGGCCCCCGGGCACTACGTGAGA TCTGGCGACTACATACCTGTACTGCGTTTCGCGCGTTGCTGGTTTGTTCT TCCGGAGAGAAAGAGTGGGCGGTGTTGGGGTGGTACGGAGATGAGATCTC GGTGTTGTCCTGCGCCTCTTGCGCTGTTGGGGTCGGTTTGTCCGCCGGAC CCGTCCGGGTTCGGTTCGCTTTTCTTTTCCCGCCCCCCCCACCCCAATGC GGTGCACCGCCCTTAATCCTTACAATATACGATGAACGTTGCCTGAGTGG TCTACATGCACGGATCACGTAGGTGTGGCCATAGCGCTGCCGTTGGCACG AGTAGCGCACATGTACATGAACGTGCATCTGGCAGCGTCACGTCGCGTCG TCGCTGGGAGCGTCTTCGATGCGCCACGGGACTCACTCCCGGCCCTAGCA CGGTCAAAGTGGGCGCCGGCAGGATCATGTCCCGAAGCCTGAAGCACGTC TTTGCGGGCCTTCCCTCCAGGAGTCCTGCCGAAGCCTTCGTGTCGTGCAA AGAACGCAAGACTCTTTATGCGCAACGCACAGCGTACTCACGAATCGCCC TGCCCCCTCCGTCATCTGCTCGTCTTTTCTCCAGATCTTCAGCGCGGCCA ACGGAGGTGACGGTTCGTGCGAGCTGGATCGCAACTCGGGAACCTCCATG TCCTGCCCGTGAGTGTGGACGGTGGATGGCGTTCGCGCACGAAGGCACTT TTTTTCTCCCTCATTTTTTTTTTTTGCCTCCCTTGTCCTCTCATGCGAGC AATACCTGGAGCACCAGCATCTGGCCTCGACGAGCGAAGCGCGGCTGCCG CTGATACTGATGCTGATGCTGCCATCGATGAGCTCTGTCGACGGTCATCC TTTTCGCACGGCCAATGTTCAAAATTTGTTCACCGAATGATGTTGCATCA TCTCTTTTACCGTTACCCAAAACCCCAGGGTCGCCGCCGGAGCCGCTGCC CTGGTACGGCAGTACGTGGTGGACGGATTCTACGCCGACGACCTTAAAGC CAGGGGCGGGCTCTGCGACTCCGAGAACCCAGCCTGGGCTTGCGATTCCT TCAGCCCTTCCGGTGCCCTCGTCAAGGTGACTTGTGCGAGAAAATGGGAT TCGGGGGGGGGG
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig13639:776..2987+

>mRNA_H-canaliculatus_F_contig13639.2930.1 ID=mRNA_H-canaliculatus_F_contig13639.2930.1|Name=mRNA_H-canaliculatus_F_contig13639.2930.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1512bp|location=Sequence derived from alignment at H-canaliculatus_F_contig13639:776..2987+ (Hapterophycus canaliculatus Oshoro5f female)
CAGTACGAGTGCGACGTGTACTGGGACAACATCTGCCTCTCGGACGATCG
CTCCGAGACCCTGGAAGACGCCAAGGGCGTCGCCCCCGGCGCGCAGCTCG
CCATCCTCGACCTTGGCACGTCGGACAGGCTGTACCAGGCCCTGGGCGGG
ACGATGTGGGAGGCCGCCGCAGGCACGGGCGCGCGGCTCCACTCCGCGTC
TTGGGGCTTTCCCGACGACCCGTGCACGGTGGACGAGGCGGCGGTTTCGT
TCGACCAGTGGGCGTACGAGCAGTACGAGTGCGACGTGTACTGGGACAAC
ATCTGCCTCTCGGACGATCGCTCCGAGACCCTGGAAGACGCCAAGGGCGT
CGCCCCCGGCGCGCAGCTCGCCATCCTCGACCTTGGCACGTCGGACAGGC
TGTACCAGGCCCTGGGCGGGACGATGTGGGAGGCCGCCGCAGGCACGGGC
GCGCGGCTCCACTCCGCGTCTTGGGGCTTTCCCGACGACCCGTGCACGGT
GGACGAGGCGGCGGTTTCGTTCGACCAGTGGGCGTACGAGAACCCGGAGC
ACCTCCTCGTCTTCGCCGCGGGCAACCTGGGCGACGACATGTCCGGCTGC
AGCATCGCGTCGCCCTCCGTGTCCAAGAACTCCCTCGCGGTAGGCTCGAG
CATGTCAGGGGCCGTCCGCCTCTCCTCCGGAGACATGGACGACGTGTCCG
ACTTCAGCAGCAAGGGTCCCACCTCGGACGGGAGGATCAAGCCGGACGTG
CTGGCCCCCGGGCACTACAACCCGGAGCACCTCCTCGTCTTCGCCGCGGG
CAACCTGGGCGACGACATGTCCGGCTGCAGCATCGCGTCGCCCTCCGTGT
CCAAGAACTCCCTCGCGGTAGGCTCGAGCATGTCAGGGGCCGTCCGCCTC
TCCTCCGGAGACATGGACGACGTGTCCGACTTCAGCAGCAAGGGTCCCAC
CTCGGACGGGAGGATCAAGCCGGACGTGCTGGCCCCCGGGCACTACATCT
TCAGCGCGGCCAACGGAGGTGACGGTTCGTGCGAGCTGGATCGCAACTCG
GGAACCTCCATGTCCTGCCCATCTTCAGCGCGGCCAACGGAGGTGACGGT
TCGTGCGAGCTGGATCGCAACTCGGGAACCTCCATGTCCTGCCCGGTCGC
CGCCGGAGCCGCTGCCCTGGTACGGCAGTACGTGGTGGACGGATTCTACG
CCGACGACCTTAAAGCCAGGGGCGGGCTCTGCGACTCCGAGAACCCAGCC
TGGGCTTGCGATTCCTTCAGCCCTTCCGGTGCCCTCGTCAAGGTGACTTG
TGCGAGAAAATGGGATTCGGGGGGGGGGGGTCGCCGCCGGAGCCGCTGCC
CTGGTACGGCAGTACGTGGTGGACGGATTCTACGCCGACGACCTTAAAGC
CAGGGGCGGGCTCTGCGACTCCGAGAACCCAGCCTGGGCTTGCGATTCCT
TCAGCCCTTCCGGTGCCCTCGTCAAGGTGACTTGTGCGAGAAAATGGGAT
TCGGGGGGGGGG
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