prot_H-canaliculatus_F_contig1363.2921.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1363.2921.1
Unique Nameprot_H-canaliculatus_F_contig1363.2921.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length608
Homology
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BLAST of mRNA_H-canaliculatus_F_contig1363.2921.1 vs. uniprot
Match: A0A6H5JTB3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTB3_9PHAE)

HSP 1 Score: 220 bits (560), Expect = 2.520e-59
Identity = 273/664 (41.11%), Postives = 324/664 (48.80%), Query Frame = 0 
Query:    1 MGIAISVTDFAALSVSEVADFISNSSFSEYRQACVDFGIDGNMLTKLPLDQLADALGRAGVDNKQHKEFFLAEIEEIRSPKVDPSKLDRKYVRELLDQSDSIDWDERSDTSEWSGVSLDNDERVLGLSMACNNLTGELPASLGKISNLQYLHAPSNLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------------------------------------------------------RINPRILSALSPSLVHLNLSHNAFEGELPLAALAPNSAGNAVSRESNFSPTPRQQGGPRRRQKGLEASTRTASSPLSYLNVSHNKFTGRISQQVGELVSLETLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLRLLENLRLDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDENPSLRGPIPGPLASRSDCAVRADQPVLEDTEATMLGSRLDEWFLMPRKA 608
            MG+A+S+ +  ALSV E+AD        E+RQA +DFGIDG+MLT LPLDQL DAL RAGV++KQH  + L EIE IR PK+DPSKLDR+ +R +L++SDS D +E S  SEWSGVS+D+D+R++ L++   +L+GELPA+L +ISNL+YLHA SNL                                                                                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                           XXXXXXX                                                        +I+P ILS LS SLV+LNL HNAFEG+LP++ L+ +SAG  V R S        QG   RR++   A+   ++SPLSYLN+ HNKFTG + +++G L SL    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX          L  LE LRLD                                                                      L+ENPSLRGPIP  LAS  +C VRADQPVLEDTEA MLGS+LDEWFLMPRKA
Sbjct:    1 MGVAMSLEELGALSVVELADLAP----PEHRQASIDFGIDGHMLTSLPLDQLQDALARAGVEDKQHLVYLLEEIENIRRPKIDPSKLDRENLRAILERSDSGDHEELSGRSEWSGVSVDSDDRIIALNVTNRHLSGELPAALFEISNLEYLHATSNLFAAKGAKLLAIGLSFESQSLHHPPTFCLRHIPCLLFSCPFLGGIVWISLYTILPIGAIPDTIGDLKRLVSLKLDHNSLTGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGANKARRWISSPELASLHFLVELRLRENRLAGKISPMLVNMQSXXXXXXXXXALQGHIPESLGEMTNLRELWLGRRENQXXXXXXXXXXXXXXXXXXXXSRNKALWKIHPHILSTLSSSLVYLNLGHNAFEGDLPVSPLSSHSAGGRVRRGSRSGSQSDGQGRNSRRKRSESAAAVVSASPLSYLNLCHNKFTGHVPEEIGSLTSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGDDGGGLGRLSSLEILRLDGNTFHGIVPAALGNLARLEVLHLQLDRLWALAVRDNNLSGRVPESLGCLTGLRSLR--------------LEENPSLRGPIPDQLASGVNCNVRADQPVLEDTEAAMLGSKLDEWFLMPRKA 646
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BLAST of mRNA_H-canaliculatus_F_contig1363.2921.1 vs. uniprot
Match: D7FPI3_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPI3_ECTSI)

HSP 1 Score: 168 bits (426), Expect = 7.550e-42
Identity = 390/532 (73.31%), Postives = 431/532 (81.02%), Query Frame = 0 
Query:   77 IRSPKVDPSKLDRKYVRELLDQSDSIDWDERSDTSEWSGVSLDNDERVLGLSMACNNLTGELPASLGKISNLQYLHAPSNLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRINPRILSALSPSLVHLNLSHNAFEGELPLAALAPNSAGNAVSRESNFSPTPRQQGGPRRRQKGLEASTRTASSPLSYLNVSHNKFTGRISQQVGELVSLETLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLRLLENLRLDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDENPSLRGPIPGPLASRSDCAVRADQPVLEDTEATMLGSRLDEWFLMPRKA 608
            IR P++DPSKLDR+ +R +L++SDS D +E S  SEWSGVS+D+D+R++ L++    L+GELPA+L +ISNL+YLHA    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    XXXXXXXXXXXXXXXXXXXXXXXXXXXXX            +I+P +LSALS SLV+LNL HNAFEG+LP++ L+P+SAG  V R S        QG   RR++   A+   ++SPLSYLN+ HNKFTGR+S+++G L S     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX              L  LE LRLD           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX L+ENPSLRGPIP  LAS  +C VRADQPVL+DTEATMLGSRLDEWFLMPRKA
Sbjct:    2 IRCPRIDPSKLDRENLRAILERSDSNDREELSGRSEWSGVSVDSDDRIIVLNVTNRTLSGELPAALFEISNLEYLHAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------------KIHPHVLSALSSSLVYLNLGHNAFEGDLPVSPLSPHSAGGRVRRGSTSGSPSEGQGRSSRRRRSESAAGVVSASPLSYLNLCHNKFTGRVSEEIGSLTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGILEGDDGGGLGRLSSLETLRLDGNTFHGIVPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLEENPSLRGPIPDQLASGVNCNVRADQPVLDDTEATMLGSRLDEWFLMPRKA 521
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1363.2921.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JTB3_9PHAE2.520e-5941.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FPI3_ECTSI7.550e-4273.31Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 313..337
e-value: 63.0
score: 6.7
coord: 217..241
e-value: 47.0
score: 7.8
coord: 501..524
e-value: 44.0
score: 7.9
coord: 169..193
e-value: 150.0
score: 3.6
coord: 425..449
e-value: 34.0
score: 8.9
coord: 265..289
e-value: 210.0
score: 2.4
coord: 340..363
e-value: 330.0
score: 0.8
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 93..240
e-value: 1.1E-42
score: 147.5
coord: 241..379
e-value: 3.9E-31
score: 109.8
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 390..589
e-value: 3.1E-44
score: 153.2
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 146..206
e-value: 6.3E-8
score: 32.3
IPR013761Sterile alpha motif/pointed domain superfamilyGENE3D1.10.150.50coord: 5..91
e-value: 3.6E-6
score: 29.1
IPR013761Sterile alpha motif/pointed domain superfamilySUPERFAMILY47769SAM/Pointed domaincoord: 11..82
NoneNo IPR availablePANTHERPTHR46662FAMILY NOT NAMEDcoord: 238..465
coord: 103..358
NoneNo IPR availablePANTHERPTHR46662:SF10coord: 238..465
coord: 404..569
coord: 103..358
NoneNo IPR availablePANTHERPTHR46662FAMILY NOT NAMEDcoord: 404..569
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 113..358
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 402..571
IPR001660Sterile alpha motif domainPROSITEPS50105SAM_DOMAINcoord: 13..80
score: 9.592

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1363contigH-canaliculatus_F_contig1363:3131..7891 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1363.2921.1mRNA_H-canaliculatus_F_contig1363.2921.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1363 3131..7891 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1363.2921.1 ID=prot_H-canaliculatus_F_contig1363.2921.1|Name=mRNA_H-canaliculatus_F_contig1363.2921.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=608bp
MGIAISVTDFAALSVSEVADFISNSSFSEYRQACVDFGIDGNMLTKLPLD
QLADALGRAGVDNKQHKEFFLAEIEEIRSPKVDPSKLDRKYVRELLDQSD
SIDWDERSDTSEWSGVSLDNDERVLGLSMACNNLTGELPASLGKISNLQY
LHAPSNLFTGAIPDTIGGLSRMTSLKLDHNSLSGRLPSSLTRLTSLTTLD
LAWNKLTGTIPMKIGTMTSLRRLSLSANKFSGTIPRELASLHFLVELRVR
ENKLAGKIPPMLGNMHSIQALDLTSNALQGHIPESLGGMTDLRELWLGGN
HMIGGIPDNLSKLQELQSLDLSRNKFMGRINPRILSALSPSLVHLNLSHN
AFEGELPLAALAPNSAGNAVSRESNFSPTPRQQGGPRRRQKGLEASTRTA
SSPLSYLNVSHNKFTGRISQQVGELVSLETLDLSCSKLEGDLPPDIGNCI
ALRVLSLSRCGLSGRLDGDNGEALGNLRLLENLRLDANTFDGGVPAEIGR
LTRLEVLNLQCNCFSGYLPSTLGQLERLWALTVRENNLSGRVPDSFGRLT
GLRSLRLDENPSLRGPIPGPLASRSDCAVRADQPVLEDTEATMLGSRLDE
WFLMPRKA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001660SAM
IPR013761SAM/pointed_sf
IPR001611Leu-rich_rpt
IPR032675LRR_dom_sf
IPR003591Leu-rich_rpt_typical-subtyp