mRNA_H-canaliculatus_F_contig1362.2918.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig1362.2918.1 vs. uniprot
Match: D7FTZ3_ECTSI (EDR2_C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTZ3_ECTSI) HSP 1 Score: 644 bits (1661), Expect = 1.070e-200 Identity = 666/1477 (45.09%), Postives = 755/1477 (51.12%), Query Frame = 3
Query: 222 RSRGEE-AAPSTPPT-AGLAAVQYASDPESARVSGRSRGRRLGI----RVGRRRSAAQATSRERAGLSG--------GYGEDAAAGADIGAXXXXXXXXXXXXXSGGHRRPSAGSRFGAMLRRGTPSLHHLRSAEPKPHADSPSQVRGAEYLAPPAPGMSPPLQLDDPPEGHFDHDHHDDDGRVARAVTGITTAS---------RRRLTRSNSAIGVNGRHFGRYEGD-GNDSGLHADSFLGGXXXXXXXXXXXXXXXXDXXXXXXRXXXXXFRGARGGSADGVFLGESSDKISFTVLAGNARDGDDGDIGGRVAYWSGSDLEQSD----------IRGEERAGRPSTGSAGTNDAGAGRARDRSSPPSGRALEERSGGVRSTQVGRERRGAESRHTVDGSSGSYSSARSKVSGWKTKK----TRRRIVDGYMSAPDDLLHRESG-IGSDAGPRG---------AALEGDESIARAEAALF-ATDTTSDADIGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGRHATVSKRRRLTGLLNFRRRSSSN--------------------------SVNGTPSLS---SSAPGAT------------DDSGMPQNG--APVVKAASGGKSVARRGPSSSTAPHRRG---------VLNRSNSTSALDRVGR-RYSDGEDGAAIPTTTVSAAVPPGT-RGNPAAAGRKGSGAKRRLLPGAPAATSTGAV---ASRRGASVSPEKHRRHR--DSFLEAGKDKLRRGRSKLSRSSFGGRSSSQ-RRHRTAPPPEGEP--WEGSQEGEKLVFRSMN---AVPLPPPPRSADPPSKPQLGNTYKRCPDSTTSGDSSAGTPWNTWGPGSASKFSVRTKGYGRTKVKAPSAPELYELASIDVYRSPAGRICGVYPMFAPPACGNTAT---GGAGRERQGEPAAEGAEDGASPRD------GXXXXXXXXXXXXXSTGHPDIPPILVVNCQLPDIPTPFSVQGDGPSIHVIFTFRATPRLCDYAARVWAEEQLSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPFAPPAGISTGDGVAVSGSEA---------------------GLS------ADAGGGAGEGGYGDVPESVRLLVEWMRRAEHDGGFRGRFKAIGDIVNADEASFETVGLPSIARRFSGKPILLYGKESSMVKGPGFAELDLNAHAFSYVGRKGLYITLDKWKRAIFRIGFLLEGRADEEQPEHMLGCGVFYGLDIYSLNELSLSPDGDRLIVTNPADEENTAVAAKLGSHSGNLSGGRATSSQEAATEPRPQPSP---SVLHTG-PXXXXXXXXXXXXXXXXXXXVVPLIPRRHMASLLRQHGSXXXXXXXVGG------NGDPATVFSPVKVAQPVRFFDDYEDDEXXXXXXXXXXXXXXXFAGGWFCALLAMITMACWSELTTGAAAA-EGEEVRWRAGFGAWLVS 4169
RS GE+ PSTPP AGL A +YASDPESA V GR R RRLG+ RVG+R A + AG+ G G DAA GA A XXXXX +GG RRPSAGSR GAMLRRG PSL+HLR + K + S Q LA PA G+SP +LDDPPE H HD D G A A TT+S RRR RS A G R + G+D G D G XX + XXXXX GD +VA+WSGSDL+ S RP +A RDRS+PP G + E +G R Q E+RHT+DGS AR K +K R R DGY SAPDDL HRESG +G A + E IA AEAALF A DTTSDA++G XXXXXXXXXXXXXXXX XXXXXXXXXX VN + L S APG + +P+NG A + ++GG RG S+S VL RSNSTSALDR Y + ED VP G G PA GRKG+ S RG S SP KHRRHR DS LEAGKDKLRRGRSKLSR SFGGRSSS +R AP P + EGS +G K V M+ A P P PP+KPQLG TY + PDS+ D A PWN+W GS S+F+VRTKGYGRTKVKAPSAPELY+L SID YRSPAGRICGVYP+F PPA AT GG+ + G D P GXXXXXXXX TGHPDIPP+LVVN QLPD+PTPF+VQGDGP++H+I TF AT RLC YAARVWAEE+ +AXXXXXXXXX P A PA S V GS A G S A+ G G GEG DVPESVRLLVEWMRRA+ DG FRGRFKAIGDIVN DE VGLPSIARRFSGKPILLYGKESSMVKGPG+ ELDLNAHAFSYVGRKGLY+TL+KWKRA+FRIGFLLEGR DEEQPEH+LGCGVF+GLD+ L+ELSLS DG+RLI TN AD EN A + + S SG+ G ++ AA R + S S G VVPL+P+RHM LLR H GG N D A + + V F D D++XXXXXXXXXXXXXX FAGGWFCALLAMIT+ACWSEL+ A +G E WR F AWLV+
Sbjct: 11 RSGGEQQVTPSTPPAVAGLDATEYASDPESAGVGGR-RVRRLGLPGKMRVGKRGRGTTAAASTSAGVVGHIDDITAPDIGADAATGA---AAXXXXXAGPDGRGAGGARRPSAGSRLGAMLRRGAPSLNHLRRSGSKASSLSSPQAEEVGDLAIPALGISPRGELDDPPERHASHDS-DRRGGAAVAPEVSTTSSLEPSSNSSGRRRFHRSKGAAGGVTRVVSHRDARAGSDIGPRGDG--GXXXIANDQRRYLGASSAEDALEYSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRHGDCDEQVAFWSGSDLDSSGDXXXXXXXXXXXXXXXXXRPDNAAA--------LRRDRSAPPCGHSAAEVAGERRGIQQSM----GEARHTLDGS------ARPKDDPPGGRKRNGDARGRAADGYKSAPDDL-HRESGRVGPAAXXXXXXXXXXXXXVPVPDGECIAIAEAALFSAMDTTSDAEVGXXXXXXXXXXXXXXXXXXSMASSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVNASSXLXXXLSGAPGVSAXXXXXXXXXXXXXXSVPRNGETAEAMNRSTGG-----RGTSASXXXXXXXXXXXXXXXQVLYRSNSTSALDRADSGSYGEAED------------VPAGAGTGKPAGGGRKGAXXXXXXXXXXXXXXXXXXXXXSGSARGLSASPLKHRRHRHRDSLLEAGKDKLRRGRSKLSRGSFGGRSSSSSQRPLRAPSPVADTASTEGSSKGRKPVTEEMDGGAAKRGPVEPAEQGPPAKPQLGTTYAKRPDSSPL-DPGAPEPWNSWTVGSGSQFNVRTKGYGRTKVKAPSAPELYQLISIDAYRSPAGRICGVYPLFTPPAFPTAATPAGGGSATDSVEGARRTGTGDEDPPLSQGPGGCGXXXXXXXXSGTGDDTGHPDIPPVLVVNFQLPDLPTPFTVQGDGPTLHIILTFHATRRLCRYAARVWAEERSAAXXXXXXXXXEEGQAGS-----------------------PEATPAAASETAAVEPLGSGAPSGXXXXXXXXXXXXGGPVPHGRSSHGAPPAEGGAGLGEGDAEDVPESVRLLVEWMRRAQDDGNFRGRFKAIGDIVNMDE-----VGLPSIARRFSGKPILLYGKESSMVKGPGYVELDLNAHAFSYVGRKGLYVTLEKWKRAVFRIGFLLEGRTDEEQPEHILGCGVFHGLDLDVLSELSLSADGERLIATNTADGENAAAVSDI-SESGS---GSIAANSSAAPNGRARGSAVDWSYASGGRSKTRRYGDVTPPSASSSSSAVVPLVPKRHMDFLLRCHIRGKSSSGDGGGGVSFDVNPDKAVFGNGI-----VGF--DTHDEDXXXXXXXXXXXXXXAFAGGWFCALLAMITIACWSELSVVAQRGPDGGEGPWRTSFSAWLVA 1404
BLAST of mRNA_H-canaliculatus_F_contig1362.2918.1 vs. uniprot
Match: A0A835Z8Q7_9STRA (EDR2_C domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8Q7_9STRA) HSP 1 Score: 167 bits (424), Expect = 2.200e-39 Identity = 111/315 (35.24%), Postives = 147/315 (46.67%), Query Frame = 3
Query: 2766 TGHPDIPPILVVNCQLPDIPTPFSVQGDGPSIHVIFTFRATPRLCDYAARVWAEEQLSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPFAPPAGISTGDGVAVSGSEAGLSADAGGGAGEGGYGDVPESVRLLVEWMRRAEHDGGFRGRFKAIGDIVNADEASFETVGLPSIARRFSGKPILLYGKESSMVK--GPGFAELDLNAHAFSYVGRKG------------------LYITLDKWKRAIFRIGFLLEGRADEEQPEHMLGCGVFYGLDIYSLNELSLSPDGDRLIVTNPADEENTAVA 3650
TGHPDIP + ++N QLP++ P S QGDGP+IHV A+ L ++ + AE+ L APP+ S G VA+ P++VRLL W ++E D RGRFK IGD+ N D TVGLPS R+F+ +PIL++G+ESS + G AELD+NAH FSY+GR LY TL KW+ A+ + L+EGR D+E PE +LG +F GLDI +LS DG L V DEE+ A
Sbjct: 293 TGHPDIPSLFIINVQLPNVAPPLSSQGDGPTIHVTMFMVASEALRQWSRVLAAEQGLQGGSTS-------------------------------------APPSPSSRGAVVAI-----------------------PDAVRLLAAWCAQSEADADMRGRFKLIGDVRNMD-----TVGLPSFCRKFNARPILIHGRESSFTRDVAKGRAELDVNAHNFSYIGRXXXXXXXXXXXXXXXXXXXXLYGTLSKWREALLHVSVLIEGRNDDELPEQVLGTALFQGLDISRAEQLSFGADGATLAV---GDEEDILFA 539
BLAST of mRNA_H-canaliculatus_F_contig1362.2918.1 vs. uniprot
Match: R1EM03_EMIHU (EDR2_C domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1EM03_EMIHU) HSP 1 Score: 76.6 bits (187), Expect = 4.440e-11 Identity = 45/129 (34.88%), Postives = 67/129 (51.94%), Query Frame = 3
Query: 3237 RGRFKAIGDIVNADEASFETVGLPSIARRFSGKPILL-------YGKESSMVKGPGFAELDLNAHAFSYVGRKGLYITLDKWKRAIFRIGFLLEGRADEEQPEHMLGCGVFYGLDIYSLNELSLSPDGD 3602
R FK IG N F +GLP++ ++GKP+++ GK SS G + E+D+ H + Y+ RKGLY + + + +GF+++G AD E PE MLG G+D L + S DGD
Sbjct: 172 RACFKLIGQASN-----FSDLGLPAMLAGYNGKPVIINKTGELHQGKSSS---GASYMEMDILVHKWQYIARKGLYSIKEHYCKLDAEVGFVIQGEADSELPERMLGAVEINGVDPTLLAKWPSSGDGD 292
BLAST of mRNA_H-canaliculatus_F_contig1362.2918.1 vs. uniprot
Match: A0A835ZBF7_9STRA (EDR2_C domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBF7_9STRA) HSP 1 Score: 78.2 bits (191), Expect = 5.380e-11 Identity = 48/138 (34.78%), Postives = 71/138 (51.45%), Query Frame = 3
Query: 3174 VPESVRLLVEWMRRAEHDGGFRGRFKAIGDIVNADEASFETVGLPSIARRFSGKPILLYGKESSMVKGPG---------FAELDLNAHAFSYVGRKGLYITLDKWKRAIFRIGFLLEGRADEEQPEHMLGCGVFYGLD 3560
+P +++LL +W AE D R RFKA+ I N +A GLP + +G+P L+ K ++ G G + ELD N + ++ R+ L L + R IGF++EGRAD E PE +LGC G+D
Sbjct: 311 LPPALQLLRDWCEGAEADAHTRSRFKAMARINNLHDA-----GLPGPVVQNNGRPTLIT-KSGTVTSGVGRVRGGGSARYLELDCNVRHWCFLARRALRHLLPRAPRVHLSIGFVIEGRADAELPEQILGCCELGGVD 442
BLAST of mRNA_H-canaliculatus_F_contig1362.2918.1 vs. uniprot
Match: A0A485LL25_9STRA (Aste57867_21993 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LL25_9STRA) HSP 1 Score: 77.0 bits (188), Expect = 2.070e-10 Identity = 46/139 (33.09%), Postives = 76/139 (54.68%), Query Frame = 3
Query: 3174 VPESVRLLVEWMRRAEHDGGFRGRFKAIGDIVNADEASFETVGLPS--IARRFSGKPILLYGKESSMVKGPGFAELDLNAHAFSYVGRKGLYITLDKWKRAIFRIGFLLEGRADEEQPEHMLGCGVFYGLDIYSLNELS 3584
V +++L +M + D R R KAIG +VN E +T+G + ++G+PIL + +G G+ E+D++AH F++V RKGL D + + GF+LEG+ D+E PE +LGC +D+ + L+
Sbjct: 483 VEPAIKLFKAFM---QDDNPMRDRLKAIGVVVNPAE---QTLGRMEKHLLETYNGQPILTR-PQHRFYRGDGYYEVDVDAHIFNFVARKGLSGVADHFGNMVVDFGFVLEGQEDDELPEQILGCVRLCKVDLKNAPRLA 614
BLAST of mRNA_H-canaliculatus_F_contig1362.2918.1 vs. uniprot
Match: A0A024UEK2_9STRA (PH domain-containing protein n=4 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UEK2_9STRA) HSP 1 Score: 77.0 bits (188), Expect = 2.170e-10 Identity = 47/141 (33.33%), Postives = 76/141 (53.90%), Query Frame = 3
Query: 3171 DVPESVRLLVEWMRRAEHDGG-FRGRFKAIGDIVNADEASFETVGLPS--IARRFSGKPILLYGKESSMVKGPGFAELDLNAHAFSYVGRKGLYITLDKWKRAIFRIGFLLEGRADEEQPEHMLGCGVFYGLDIYSLNELS 3584
D P + ++ +R +G F R KAIG +VN +E + VG + ++G+PIL + +G G+ E+D++AH F++V RKGL D + I GF+LEG+ D+E PE +LGC +D+ + L+
Sbjct: 505 DDPTEMEPPIKLLRGFLEEGNAFTDRLKAIGIVVNPEE---QNVGRMEKHLLETYNGQPILTR-PQHRFYRGDGYFEVDIDAHLFNFVARKGLSGVADHFGHMIVDFGFVLEGQEDDEVPEQILGCVRLCKVDLKNAPRLA 641
BLAST of mRNA_H-canaliculatus_F_contig1362.2918.1 vs. uniprot
Match: A0A067C4M5_SAPPC (PH domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067C4M5_SAPPC) HSP 1 Score: 76.6 bits (187), Expect = 2.210e-10 Identity = 45/139 (32.37%), Postives = 71/139 (51.08%), Query Frame = 3
Query: 3177 PESVRLLVEWMRRAEHDGG---FRGRFKAIGDIVNADEASFETVGLPSIARRFSGKPILLYGKESSMVKGPGFAELDLNAHAFSYVGRKGLYITLDKWKRAIFRIGFLLEGRADEEQPEHMLGCGVFYGLDIYSLNELS 3584
P + + +R DG R R KAIG +VN E + + ++G+PIL + +G G+ E+D++AH F+YV RKGL D + + GF+LEG+ D+E PE +LGC +D+ + +S
Sbjct: 388 PPCIEPAIRLLRAFLDDGNDPIIRDRLKAIGIVVNPAEQALGRTER-HLLETYNGQPILTR-PQHRFYRGDGYFEVDIDAHLFNYVARKGLCGVTDHFGNMVVDFGFVLEGQEDDELPEQILGCVRLCKVDVKTAPTMS 524
BLAST of mRNA_H-canaliculatus_F_contig1362.2918.1 vs. uniprot
Match: A0A225WXH4_9STRA (PH domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WXH4_9STRA) HSP 1 Score: 76.3 bits (186), Expect = 2.420e-10 Identity = 47/137 (34.31%), Postives = 74/137 (54.01%), Query Frame = 3
Query: 3180 ESVRLLVEWMRRAEHDGGFRGRFKAIGDIVNADEASFETVGLPS--IARRFSGKPILLYGKESSMVKGPGFAELDLNAHAFSYVGRKGLYITLDKWKRAIFRIGFLLEGRADEEQPEHMLGCGVFYGLDIYSLNELS 3584
++VRLL ++M + RFKAIG + N E +T+G + ++G+PIL + +G G+ E+D+NAH F+Y+ RKGL + + GF+LEG+ D E PE +LGC +D+ +LS
Sbjct: 343 QAVRLLKDFM---QPQSWVSERFKAIGVVANPQE---QTLGRAERHLLDTYNGQPILTR-PQHRFYRGDGYFEVDVNAHDFNYIARKGLVGVSTHAYKMVLDFGFVLEGQEDHELPEQILGCVRLCKVDVRRAPKLS 472
BLAST of mRNA_H-canaliculatus_F_contig1362.2918.1 vs. uniprot
Match: W4H4Q6_9STRA (PH domain-containing protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H4Q6_9STRA) HSP 1 Score: 76.6 bits (187), Expect = 2.780e-10 Identity = 44/139 (31.65%), Postives = 74/139 (53.24%), Query Frame = 3
Query: 3171 DVPESVRLLVEWMRRAEHDGG-FRGRFKAIGDIVNADEASFETVGLPSIARRFSGKPILLYGKESSMVKGPGFAELDLNAHAFSYVGRKGLYITLDKWKRAIFRIGFLLEGRADEEQPEHMLGCGVFYGLDIYSLNELS 3584
D P + ++ +R DG R KAIG +VN +E + + + ++G+PIL + +G G+ E+D++AH F++V RKGL D + + GF+LEG+ D+E PE +LGC +D+ + L+
Sbjct: 488 DDPTQLEPSIKLLRGFLQDGNPITDRLKAIGIVVNPEEQNLGRME-KHLLETYNGQPILTR-PQHRFYRGDGYFEVDIDAHTFNFVARKGLSGVADHFGNMVVDFGFVLEGQDDDEVPEQILGCVRLCKVDLKNAPRLA 624
BLAST of mRNA_H-canaliculatus_F_contig1362.2918.1 vs. uniprot
Match: K3X6M4_GLOUD (PH domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X6M4_GLOUD) HSP 1 Score: 76.6 bits (187), Expect = 2.970e-10 Identity = 44/128 (34.38%), Postives = 71/128 (55.47%), Query Frame = 3
Query: 3180 ESVRLLVEWMRRAEHDGGFRGRFKAIGDIVNADEASFETVGLPSIARRFSGKPILLYGKESSMVKGPGFAELDLNAHAFSYVGRKGLYITLDKWKRAIFRIGFLLEGRADEEQPEHMLGCGVFYGLDI 3563
++V+LL +M+ A G R RFKAIG +VN E + ++G+PIL + +G G+ E+D++AH F++V RKGL + ++ + GF+LEG+ D E PE +LG +D+
Sbjct: 538 QAVKLLKTFMQGAS---GVRDRFKAIGIVVNPQEQKLGRTER-HLLETYNGQPILTR-PQHRFYEGEGYFEVDVDAHEFNFVARKGLVGVSEHFRNMVVDFGFVLEGQEDSELPEQILGSVRLCKIDV 660 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1362.2918.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1362.2918.1 >prot_H-canaliculatus_F_contig1362.2918.1 ID=prot_H-canaliculatus_F_contig1362.2918.1|Name=mRNA_H-canaliculatus_F_contig1362.2918.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=1336bp MAEHLGPATAVARARSRGEEAAPSTPPTAGLAAVQYASDPESARVSGRSRback to top mRNA from alignment at H-canaliculatus_F_contig1362:14254..24902- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig1362.2918.1 ID=mRNA_H-canaliculatus_F_contig1362.2918.1|Name=mRNA_H-canaliculatus_F_contig1362.2918.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=10649bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1362:14254..24902- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1362:14254..24902- >mRNA_H-canaliculatus_F_contig1362.2918.1 ID=mRNA_H-canaliculatus_F_contig1362.2918.1|Name=mRNA_H-canaliculatus_F_contig1362.2918.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=8016bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1362:14254..24902- (Hapterophycus canaliculatus Oshoro5f female)back to top |