prot_H-canaliculatus_F_contig13617.2916.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig13617.2916.1
Unique Nameprot_H-canaliculatus_F_contig13617.2916.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length185
Homology
[Close]
BLAST of mRNA_H-canaliculatus_F_contig13617.2916.1 vs. uniprot
Match: D8LHL0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHL0_ECTSI)

HSP 1 Score: 122 bits (305), Expect = 1.020e-28
Identity = 80/176 (45.45%), Postives = 98/176 (55.68%), Query Frame = 0 
Query:   12 EGFGPGVGALLRRSSSGAGRSLTVDTR---RXXXXXXXXXXXXXXXXXXXXSSWQTLXXXXXXXXXXRLVDGRASGA-NAIEMRVAGGQQSKGTYYSPRRRAIGQAFRPGELECECKFSRRLPLYHRLRAKKVLDTLAKYTLEGFRVRGRSGLYVCPDRVGNFFYMTLSEEGGREA 183
            +G GPG   LL ++S+ AG SLTVDTR   R                    SS   L          R+VDGRA+ + +             G    P+R  +GQAFR GEL+CECK+SRR PLYHRL+A+ VL TLA   L+G RV GRS LYVCPD++GNF YMTLSE   R+A
Sbjct: 1843 DGIGPGGEGLLSKASTWAGCSLTVDTRSVVRGVFRRENSLDAANKGSGSPCSSPTQLVLDGGGGESGRVVDGRATNSTHXXXXXXXXXXXXXGGLVLPQRE-LGQAFREGELQCECKYSRRFPLYHRLQAQMVLVTLATTALDGLRVHGRSDLYVCPDQLGNF-YMTLSESPRRDA 2016
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig13617.2916.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LHL0_ECTSI1.020e-2845.45Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig13617contigH-canaliculatus_F_contig13617:352..1715 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig13617.2916.1mRNA_H-canaliculatus_F_contig13617.2916.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig13617 350..1715 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig13617.2916.1 ID=prot_H-canaliculatus_F_contig13617.2916.1|Name=mRNA_H-canaliculatus_F_contig13617.2916.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=185bp
RKLTSGESIGAEGFGPGVGALLRRSSSGAGRSLTVDTRRAGGGGAVLADS
RNGGNGASPSSWQTLATGGGGGGGGRLVDGRASGANAIEMRVAGGQQSKG
TYYSPRRRAIGQAFRPGELECECKFSRRLPLYHRLRAKKVLDTLAKYTLE
GFRVRGRSGLYVCPDRVGNFFYMTLSEEGGREAMR
back to top