mRNA_H-canaliculatus_F_contig13616.2915.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig13616.2915.1 vs. uniprot
Match: D8LC24_ECTSI (Eukaryotic translation initiation factor 2A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC24_ECTSI) HSP 1 Score: 212 bits (539), Expect = 1.440e-63 Identity = 97/100 (97.00%), Postives = 100/100 (100.00%), Query Frame = 1
Query: 4 QGEPTFEFGSAHRNTISWSPHGRFLLLAGLGNLAGEMDFWDVNRKKVMGSTSSHCAVAYGWSPDSRWFLTATCAPRMNVDNDVKVFRYDGSGPVVKREVD 303
+GEPTFEFGSAHRNTISWSPHGRFLLLAGLGNLAGEMDFWDVNRKKVMGSTSSHCAVAYGWSPDSRWFLTATCAPRMNVDNDVKVFRYDGSGPVVK+EV+
Sbjct: 331 KGEPTFEFGSAHRNTISWSPHGRFLLLAGLGNLAGEMDFWDVNRKKVMGSTSSHCAVAYGWSPDSRWFLTATCAPRMNVDNDVKVFRYDGSGPVVKKEVE 430
BLAST of mRNA_H-canaliculatus_F_contig13616.2915.1 vs. uniprot
Match: A0A7S2Y000_9STRA (Eukaryotic translation initiation factor 2A (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y000_9STRA) HSP 1 Score: 159 bits (403), Expect = 3.290e-46 Identity = 65/98 (66.33%), Postives = 83/98 (84.69%), Query Frame = 1
Query: 10 EPTFEFGSAHRNTISWSPHGRFLLLAGLGNLAGEMDFWDVNRKKVMGSTSSHCAVAYGWSPDSRWFLTATCAPRMNVDNDVKVFRYDGSGPVVKREVD 303
EP FEFG AHRN ISWSPHGRFL LAG GNLAG+MDFWD+N+KK+MG+ + HCAV +GW+PDSR+F+ +T PRMNVDN +K+F+Y+G GPV+++ D
Sbjct: 152 EPMFEFGEAHRNNISWSPHGRFLCLAGFGNLAGDMDFWDINKKKMMGTNTCHCAVGFGWAPDSRYFMASTLTPRMNVDNGIKIFKYNGIGPVIEKAED 249
BLAST of mRNA_H-canaliculatus_F_contig13616.2915.1 vs. uniprot
Match: A0A836C9Y7_9STRA (Eukaryotic translation initiation factor 2A n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9Y7_9STRA) HSP 1 Score: 164 bits (414), Expect = 1.600e-45 Identity = 71/100 (71.00%), Postives = 84/100 (84.00%), Query Frame = 1
Query: 4 QGEPTFEFGSAHRNTISWSPHGRFLLLAGLGNLAGEMDFWDVNRKKVMGSTSSHCAVAYGWSPDSRWFLTATCAPRMNVDNDVKVFRYDGSGPVVKREVD 303
+G+ F FG+AHRNT++WS HGRFL +AG GNLAGEMDFWD R K++GS +SHCAV YGWSPDSR+F+TATCAPRMNVDN V VF+Y+GSGPV R VD
Sbjct: 343 KGDQVFMFGTAHRNTLAWSAHGRFLCIAGFGNLAGEMDFWDTRRSKLLGSAASHCAVKYGWSPDSRYFMTATCAPRMNVDNGVHVFKYNGSGPVYSRAVD 442
BLAST of mRNA_H-canaliculatus_F_contig13616.2915.1 vs. uniprot
Match: A0A7S2W6Z7_9STRA (Eukaryotic translation initiation factor 2A n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W6Z7_9STRA) HSP 1 Score: 154 bits (389), Expect = 1.940e-42 Identity = 66/89 (74.16%), Postives = 80/89 (89.89%), Query Frame = 1
Query: 19 FEFGSAHRNTISWSPHGRFLLLAGLGNLAGEMDFWDVNRKKVMGSTSSHCAVAYGWSPDSRWFLTATCAPRMNVDNDVKVFRYDGSGPV 285
F FG+AHRNTI +SPHGRFL LAG GNLAG+MDFWDVN++K MGS ++HCAV +GWSPDSR+F+TAT APRMNVDN VK+FRY+G+GP+
Sbjct: 209 FSFGTAHRNTICFSPHGRFLCLAGFGNLAGDMDFWDVNKQKKMGSNTAHCAVGFGWSPDSRFFMTATLAPRMNVDNGVKIFRYNGAGPI 297
BLAST of mRNA_H-canaliculatus_F_contig13616.2915.1 vs. uniprot
Match: W7TR14_9STRA (Eukaryotic translation initiation factor 2A n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TR14_9STRA) HSP 1 Score: 155 bits (391), Expect = 3.660e-42 Identity = 67/96 (69.79%), Postives = 83/96 (86.46%), Query Frame = 1
Query: 10 EPTFEFGSAHRNTISWSPHGRFLLLAGLGNLAGEMDFWDVNRKKVMGSTSSHCAVAYGWSPDSRWFLTATCAPRMNVDNDVKVFRYDGSGPVVKRE 297
EP FEFG AHRNT+S+SPHGRF++LAG GNLAGEMDFWD N++K+MG +SHC+V YGWSP R+F+TAT APRMNVDN VK+F+Y+G+GP+ K E
Sbjct: 347 EPIFEFGQAHRNTVSFSPHGRFVVLAGFGNLAGEMDFWDRNKQKLMGRNTSHCSVGYGWSPCGRYFMTATLAPRMNVDNAVKLFKYNGAGPLHKAE 442
BLAST of mRNA_H-canaliculatus_F_contig13616.2915.1 vs. uniprot
Match: A0A7S2W6T5_9STRA (Eukaryotic translation initiation factor 2A n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W6T5_9STRA) HSP 1 Score: 154 bits (389), Expect = 7.770e-42 Identity = 66/89 (74.16%), Postives = 80/89 (89.89%), Query Frame = 1
Query: 19 FEFGSAHRNTISWSPHGRFLLLAGLGNLAGEMDFWDVNRKKVMGSTSSHCAVAYGWSPDSRWFLTATCAPRMNVDNDVKVFRYDGSGPV 285
F FG+AHRNTI +SPHGRFL LAG GNLAG+MDFWDVN++K MGS ++HCAV +GWSPDSR+F+TAT APRMNVDN VK+FRY+G+GP+
Sbjct: 341 FSFGTAHRNTICFSPHGRFLCLAGFGNLAGDMDFWDVNKQKKMGSNTAHCAVGFGWSPDSRFFMTATLAPRMNVDNGVKIFRYNGAGPI 429
BLAST of mRNA_H-canaliculatus_F_contig13616.2915.1 vs. uniprot
Match: A0A7S3H3S4_9STRA (Eukaryotic translation initiation factor 2A n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H3S4_9STRA) HSP 1 Score: 147 bits (372), Expect = 1.890e-39 Identity = 64/94 (68.09%), Postives = 81/94 (86.17%), Query Frame = 1
Query: 7 GEPTFEFGSAHRNTISWSPHGRFLLLAGLGNLAGEMDFWDVNRKKVMGSTSSHCAVAYGWSPDSRWFLTATCAPRMNVDNDVKVFRYDGSGPVV 288
G P +++G+AHRNTISWSPHGRFL +AG GNLAGEMDF+D R K +GST+SHC+ + WSPDSR F+TA+ APRMNVDN++KVF+Y+G+GPVV
Sbjct: 339 GVPVYQYGAAHRNTISWSPHGRFLCVAGFGNLAGEMDFYDTLRSKKIGSTASHCSTYHAWSPDSRHFVTASLAPRMNVDNNLKVFKYNGAGPVV 432
BLAST of mRNA_H-canaliculatus_F_contig13616.2915.1 vs. uniprot
Match: A0A6G0X7T5_9STRA (Eukaryotic translation initiation factor 2A n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X7T5_9STRA) HSP 1 Score: 145 bits (367), Expect = 6.290e-39 Identity = 65/92 (70.65%), Postives = 72/92 (78.26%), Query Frame = 1
Query: 13 PTFEFGSAHRNTISWSPHGRFLLLAGLGNLAGEMDFWDVNRKKVMGSTSSHCAVAYGWSPDSRWFLTATCAPRMNVDNDVKVFRYDGSGPVV 288
P FEFGSA RN ISWSPHGRFL LAG GNL G MDFWD N+ K +GST S CA YGWSPDSR+F TAT PR+ VDN K+F+YDG+GPVV
Sbjct: 323 PVFEFGSAWRNVISWSPHGRFLCLAGFGNLPGNMDFWDRNKLKKLGSTKSECATCYGWSPDSRYFATATTHPRVRVDNGFKIFKYDGTGPVV 414
BLAST of mRNA_H-canaliculatus_F_contig13616.2915.1 vs. uniprot
Match: A0A7S4A3S9_9STRA (Eukaryotic translation initiation factor 2A n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A3S9_9STRA) HSP 1 Score: 143 bits (360), Expect = 6.890e-38 Identity = 62/94 (65.96%), Postives = 75/94 (79.79%), Query Frame = 1
Query: 4 QGEPTFEFGSAHRNTISWSPHGRFLLLAGLGNLAGEMDFWDVNRKKVMGSTSSHCAVAYGWSPDSRWFLTATCAPRMNVDNDVKVFRYDGSGPV 285
+ E + FG+AHRN I W+PHGRFL L G GNLAG++DFWD N+KK +GS + CAV YGWSPDSR F+TAT APRMNVDN + V+RYDGSGP+
Sbjct: 324 EAEQIYAFGNAHRNVICWAPHGRFLALCGFGNLAGDVDFWDRNKKKKIGSVNMPCAVEYGWSPDSRLFVTATTAPRMNVDNGIHVYRYDGSGPL 417
BLAST of mRNA_H-canaliculatus_F_contig13616.2915.1 vs. uniprot
Match: A0A485KMC5_9STRA (Eukaryotic translation initiation factor 2A n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KMC5_9STRA) HSP 1 Score: 142 bits (359), Expect = 8.710e-38 Identity = 63/92 (68.48%), Postives = 72/92 (78.26%), Query Frame = 1
Query: 13 PTFEFGSAHRNTISWSPHGRFLLLAGLGNLAGEMDFWDVNRKKVMGSTSSHCAVAYGWSPDSRWFLTATCAPRMNVDNDVKVFRYDGSGPVV 288
P FEFGSA RN ISWSPHGRFL LAG GNL G MDFWD N+ K +GST + CA +GWSPDSR+F TAT PR+ VDN K+F+YDG+GPVV
Sbjct: 320 PVFEFGSAWRNVISWSPHGRFLCLAGFGNLPGNMDFWDRNKLKKLGSTKAECATVHGWSPDSRYFATATTFPRVRVDNGFKIFKYDGTGPVV 411 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig13616.2915.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig13616.2915.1 >prot_H-canaliculatus_F_contig13616.2915.1 ID=prot_H-canaliculatus_F_contig13616.2915.1|Name=mRNA_H-canaliculatus_F_contig13616.2915.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=101bp RQGEPTFEFGSAHRNTISWSPHGRFLLLAGLGNLAGEMDFWDVNRKKVMGback to top mRNA from alignment at H-canaliculatus_F_contig13616:815..2730+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig13616.2915.1 ID=mRNA_H-canaliculatus_F_contig13616.2915.1|Name=mRNA_H-canaliculatus_F_contig13616.2915.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=1916bp|location=Sequence derived from alignment at H-canaliculatus_F_contig13616:815..2730+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig13616:815..2730+ >mRNA_H-canaliculatus_F_contig13616.2915.1 ID=mRNA_H-canaliculatus_F_contig13616.2915.1|Name=mRNA_H-canaliculatus_F_contig13616.2915.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=606bp|location=Sequence derived from alignment at H-canaliculatus_F_contig13616:815..2730+ (Hapterophycus canaliculatus Oshoro5f female)back to top |