mRNA_H-canaliculatus_F_contig1361.2912.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig1361.2912.1 vs. uniprot
Match: A0A6H5KTH9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KTH9_9PHAE) HSP 1 Score: 524 bits (1350), Expect = 2.780e-174 Identity = 292/387 (75.45%), Postives = 323/387 (83.46%), Query Frame = 3
Query: 57 MAGRSLLLFLVLEAICRSTASDCAFVASTLSARRHRHG-NEGRIQRARRGFVCSMG-----GGRDAVVNKAVAAGLLGLQLLSMPLTLVTSGRPGGSALPGLDVMLAAAQAREARTTEEEMIRKFLEVE--KFDLKTQVEGNLKKQSKTKPAPLPKELQTPKKGKQSPRVKLVPVSTDKLAKSVETIQGLAPYLDEVEYLITARSWDYLKGFLGVFATCEEDFVSLIDGMYPTDRPVDVSARDSMQLEAQNVFLAVDDLYHASMSKKVKSSEKAYVKLALSYDRFLKAGNIVPIYDPVSSTEKFFNDIPDDMLRYERDSKVPLAVRDAVLILKGPDKGRTAIIVGIVSSRSQAVVRVGGNQRREMRVLDLADIARQLPDNPK--AGG 1187
M R +LL VLE IC STAS AFV S LS+RR + G QR RR CSMG GGR V+NKAV AGLLGLQLLS+PL +V S +P G+ALP LDV+ AAA+ + TEEE KF+E+E KF+ KTQVEGNLKKQSK K PLP+ELQTPKKGKQSPRVKLVPVS DKLAKSVETIQGLAPYLDEVEYLIT+RSWDYLKGFLGVFATCEEDFV+LIDGMYPTD+PVDVS+RDSMQLEAQNVFLAVDDLY ASM+KKVK SEKAYVKLALSYDRFLKAGNIVP YDPVS+TEKFF DIPD+MLRYERDSKVPL VRDAVLILKGPDKGRTAI+VG++ SR+QAVVR+ G REMR+L+L+DIARQLPD+PK AGG
Sbjct: 1 MERRYVLLIFVLEGICSSTASGSAFVFSKLSSRRQQWAWAAGSTQRGRRNSGCSMGAGSGEGGRGEVMNKAVVAGLLGLQLLSLPLGVV-SRQPRGAALPRLDVVSAAAEVTAPQATEEE---KFVEIELEKFERKTQVEGNLKKQSKAKRVPLPEELQTPKKGKQSPRVKLVPVSNDKLAKSVETIQGLAPYLDEVEYLITSRSWDYLKGFLGVFATCEEDFVALIDGMYPTDKPVDVSSRDSMQLEAQNVFLAVDDLYQASMAKKVKGSEKAYVKLALSYDRFLKAGNIVPAYDPVSNTEKFFTDIPDEMLRYERDSKVPLTVRDAVLILKGPDKGRTAIVVGVIKSRNQAVVRMDGTLTREMRILELSDIARQLPDDPKMTAGG 383
BLAST of mRNA_H-canaliculatus_F_contig1361.2912.1 vs. uniprot
Match: A0A836C8F8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8F8_9STRA) HSP 1 Score: 236 bits (602), Expect = 7.400e-68 Identity = 118/212 (55.66%), Postives = 162/212 (76.42%), Query Frame = 3
Query: 546 LVPVSTDKLAKSVETIQGLAPYLDEVEYLITARSWDYLKGFLGVFATCEEDFVSLIDGMYPTDRPVDVSARDSMQLEAQNVFLAVDDLYHASMSKKVKSSEKAYVKLALSYDRFLKAGNIVPIYDPVSSTEKFFNDIPDDMLRYERDSKVPLAVRDAVLILKGPDKGRTAIIVGIVSSRSQAVVRVGGNQRREMRVLDLADIARQLPDNPKA 1181
+VPV ++L +V IQ L PYL+EVEYLIT+++W YL+GFLGVF+ EE+FV LIDG+YPT+ P D S+R++MQ EAQNVFLA+DDL AS K+ K++EK++VKLAL+YDRFLKAG +V YDP++STE F++ IPD L Y D+ P ++D +LILKGPDKGRT ++G++ SR +A+VR+ N +E+++L L DIA+QL P A
Sbjct: 1 MVPVRDNQLETAVAKIQALNPYLEEVEYLITSKNWGYLQGFLGVFSEQEENFVDLIDGLYPTESPADKSSREAMQYEAQNVFLALDDLNTASRYKRAKAAEKSFVKLALAYDRFLKAGGLVQTYDPITSTEPFYSSIPDSALVY--DTTKPPELKDNILILKGPDKGRTGRLIGVIKSRQEAIVRMDHN--KEVKLLSLGDIAKQLDTPPPA 208
BLAST of mRNA_H-canaliculatus_F_contig1361.2912.1 vs. uniprot
Match: A0A7S2RHK3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RHK3_9STRA) HSP 1 Score: 151 bits (381), Expect = 8.660e-36 Identity = 80/205 (39.02%), Postives = 130/205 (63.41%), Query Frame = 3
Query: 585 ETIQGLAPYLDEVEYLITARSWDYLKGFLGVFATCEEDFVSLIDGMYPTDRPVDVSARDSMQLEAQNVFLAVDDLYHASMSKKVKSSEKAYVKLALSYDRFLKAGNIVPIYDPVSSTEKFFNDIPDDMLRYERDSKVPLAVRDAVLILKGPDKGRTAIIVGIVSSRSQAVVRVGGNQRR-------EMRVLDLADIARQLPDNPK 1178
E I+ L YL+E+E I AR WD L ++GVF E F ++ID + + D A+ +M+ EA+ +FL +D + A+ + ++ +EK+YV+LA++YDRFLKA ++ +YD + T K + IP+D+L Y+R+ P V+D VLI+ GPDKGRT ++G+ + S+ VVRV +R E++V+DL ++A+ +PD P+
Sbjct: 168 ERIKVLYAYLEEMERDIFARKWDTLSSYIGVFEKQELAFENIIDSLRTSQAAADRDAKRAMEYEARQMFLTLDAMAEATRFRDIRQAEKSYVQLAIAYDRFLKAADLYDVYDD-TDTSKLYESIPEDLLVYDRED--PPRVQDDVLIIAGPDKGRTGKLIGVSDASSKGVVRVEYRKRTASKDASFEVKVVDLQNVAKTIPDKPQ 369
BLAST of mRNA_H-canaliculatus_F_contig1361.2912.1 vs. uniprot
Match: A0A7S2UZ25_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZ25_9STRA) HSP 1 Score: 132 bits (333), Expect = 1.250e-29 Identity = 86/214 (40.19%), Postives = 126/214 (58.88%), Query Frame = 3
Query: 543 KLVPVSTDKLAKSVETIQGLAPYLDEVEYLITARSWDYLKGFLGVFATCEEDFVSLIDGMYPTDRPVDVSARDSMQLEAQNVFLAVDDLYHASMSKKVKSSEKAYVKLALSYDRFLKAGNIVPIYDPVS-STEKFFNDIPDDML---RYERDSKVPLA---VRDAVLILKGPDKGRTAIIVGIVSSRSQAVVRVGGNQRREMRVLDLADIARQL 1163
K+ V LA++ IQ L PY+DEVE I W + GFLGVF+ E+ FV+LIDG++P++ P+D +R+SMQ EAQ +FLA+D+L A+ K+V+ S AY KLA SY RFL+A +VP D +T ND +M +YE + L RD VL++ GPDKGR +V I +AVV++ + +E+ + L + +Q+
Sbjct: 172 KVTGVGKSDLAEAKIKIQALQPYVDEVENYIYEERWPLMGGFLGVFSEQEDQFVNLIDGLFPSNSPLDTISRESMQYEAQRMFLALDELREAAKLKQVRISRDAYSKLAKSYFRFLEAAALVPKVDLAQLATSTNLNDSEMEMEAEEKYEERKQSTLERPEPRDEVLLVSGPDKGRLGKLVAI-EINGKAVVKL--DITKEVIEVPLESVVKQV 382
BLAST of mRNA_H-canaliculatus_F_contig1361.2912.1 vs. uniprot
Match: A0A7R9U506_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U506_9STRA) HSP 1 Score: 131 bits (329), Expect = 2.180e-29 Identity = 69/181 (38.12%), Postives = 114/181 (62.98%), Query Frame = 3
Query: 552 PVSTDKLAKSVET------IQGLAPYLDEVEYLITARSWDYLKGFLGVFATCEEDFVSLIDGMYPTDRPVDVSARDSMQLEAQNVFLAVDDLYHASMSKKVKSSEKAYVKLALSYDRFLKAGNIVPIYDPVSSTEKFFNDIPDDMLRYERDSKVPLAVRDAVLILKGPDKGRTAIIVGIVS 1076
P+S K A++ E I L PY+DE+E I ++ L+ FL VF+ E+ FV IDG+ ++A ++M+ EA+ +FLA+D++ A+ +K +K Y+KLAL+YDR+LKA + +P YD + STEK+F +IPD+ L ++ + K +D V+ ++GPDKGRT +++G ++
Sbjct: 102 PLSFGKAAEASEIATARRKIAALKPYMDEIERYIFTNDYEPLRAFLNVFSQQEDSFVKTIDGVASRGTADAIAAAEAMEHEAKQLFLALDEIRKAATLEKPSGLKKGYIKLALAYDRYLKASDNLPGYDKIVSTEKYFANIPDEWLVFDTEKKPE--PQDPVIFIEGPDKGRTGVLLGYIT 280
BLAST of mRNA_H-canaliculatus_F_contig1361.2912.1 vs. uniprot
Match: A0A6U4CV34_9STRA (Hypothetical protein n=10 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4CV34_9STRA) HSP 1 Score: 129 bits (324), Expect = 1.010e-28 Identity = 74/182 (40.66%), Postives = 117/182 (64.29%), Query Frame = 3
Query: 576 KSVETIQGLAPYLDEVEYLITARSWDYLKGFLGVFATCEEDFVSLIDGMYPTDR-PVDVSARDSMQLEAQNVFLAVDDLYHASMSKKVKSSEKAYVKLALSYDRFLKAGNIVPI-YDPVSSTEKFFNDIPDDMLRYERDSKVPLAVRDAVLILKGPDKGRTAIIVGIVSSRSQAVVRVGGNQ 1115
K+ E I L PYLDE++ I + L+ FL VF+ EE F++ I+ + R P ++M+ EA+ +FLA+DD+ A+ +K + +K Y+KLAL+YDR+LKA + +P+ YD V STEKFF D+PD+ L Y+ ++ +P+++ D VL + GPDKGRT I++G +S+ + V N+
Sbjct: 121 KAREKIAALKPYLDEIQRYIYTEDYAPLRAFLNVFSAQEEAFLTTIESVGSASRGPAASVTAEAMEHEAKEIFLALDDIRKAATLQKPVALKKGYIKLALAYDRYLKASDNLPLGYDNVVSTEKFFADVPDEWLVYDTET-LPVSL-DPVLFIAGPDKGRTGILLGY---KSRPIADVAANE 297
BLAST of mRNA_H-canaliculatus_F_contig1361.2912.1 vs. uniprot
Match: A0A0G4GSY0_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4GSY0_VITBC) HSP 1 Score: 119 bits (297), Expect = 3.010e-25 Identity = 67/197 (34.01%), Postives = 107/197 (54.31%), Query Frame = 3
Query: 591 IQGLAPYLDEVEYLITARSWDYLKGFLGVFATCEEDFVSLIDGMYPTDRPVDVSARDSMQLEAQNVFLAVDDLYHASMSKKVKSSEKAYVKLALSYDRFLKAGNIVPIYDPVSSTEKFFNDIPDDMLRYERDSKVPLAVRDAVLILKGPDKGRTAIIVGIVSSRSQAVVRVGG-------NQRREMRVLDLADIARQ 1160
I+ +A LDE++ I WD L + F D +P PVD + R +++ E +F +V+ L A K V+ +E+A+ +++S+DR+LKAG++ +YDP+ STEKFF + D L Y + P +RD VL+L+GPDKG+T I++G+ V R G RE++V+ A IA++
Sbjct: 112 IRQIATVLDELQADIYDEDWDILASYPQQLRAYVPIFTKYTDSAFPGKDPVDENTRFALRYEVGRLFGSVERLKRAVDKKDVRETEEAFAAMSVSFDRYLKAGDLYEVYDPIISTEKFFEGVEDSQLVYVPPLRDPPKIRDQVLLLRGPDKGKTGILLGVEGDEVAKVKRKGVVKLDTKVGSIRELKVVPYAFIAKR 308
BLAST of mRNA_H-canaliculatus_F_contig1361.2912.1 vs. uniprot
Match: D7FKJ3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKJ3_ECTSI) HSP 1 Score: 118 bits (296), Expect = 4.220e-25 Identity = 63/197 (31.98%), Postives = 115/197 (58.38%), Query Frame = 3
Query: 585 ETIQGLAPYLDEVEYLITARSWDYLKGFLGVFATCEEDFVSLIDGMYPTDRPVDVSARDSMQLEAQNVFLAVDDLYHASMSKKVKSSEKAYVKLALSYDRFLKAGNIVPIYDPVSSTEKFFNDIPDDMLRYERDSKVPLAVRDAVLILKGPDKGRTAIIVGIVS---SRSQAVVRVGGNQR---REMRVLDLADIAR 1157
+ ++ A LDE++ I+ WD + + F T F D +PTD PVD ++R +++ E + AV+ L A+ + + ++ A+ ++++YDR+LKAGN+ YD V+STE F+ D+ + L+Y SK P ++D VL++ GPDKG+T ++G+ S ++A+V++ + RE++V+ L +A+
Sbjct: 132 DKLRRAAKMLDELQDDISNSDWDLVTTYPNAFRTLVPVFTKYTDAAFPTDDPVDTTSRVALRYEVGRFYGAVERLKRAAEQQNSREAQSAFAAMSVAYDRYLKAGNLYDGYDSVTSTEGFYADVSNSSLKYVPPSKDPPKIKDNVLLVAGPDKGKTGFMIGVEGGSLSATKAIVKLETSSALGMREIKVVPLDYVAK 328
BLAST of mRNA_H-canaliculatus_F_contig1361.2912.1 vs. uniprot
Match: A0A7S3Y3I2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y3I2_HETAK) HSP 1 Score: 110 bits (274), Expect = 1.450e-22 Identity = 59/205 (28.78%), Postives = 113/205 (55.12%), Query Frame = 3
Query: 585 ETIQGLAPYLDEVEYLITARSWDYLKGFLGVFATCEEDFVSLIDGMYPTDRPVDVSARDSMQLEAQNVFLAVDDLYHASMSKKVKSSEKAYVKLALSYDRFLKAGNIVPIYDPVSSTEKFFNDIPDDMLRYERDSKVPLAVRDAVLILKGPDKGRTAIIVGIVSS-------RSQAVVRVGG-----NQRREMRVLDLADIARQL 1163
+ ++ +A LDE++ I W+++ + F F D + + D +R +++ E +F AV+ L A+ K + ++ A+ +++++YDR+LKAG + YDPV+STEKFF D+PD LR+ + P ++D VL+ GPDKG+T ++G+ + + +V++ ++ RE++V+ A +A++L
Sbjct: 89 DRLRRIARTLDELQRDIFNEDWEFVATYPATFRAFVPVFTRYTDARFEGEGEADRQSRVALRYEVGRLFGAVERLKRAAEKKDPREAQAAFAQISVAYDRYLKAGYLYDAYDPVTSTEKFFADVPDSALRFAPPAADPPKIKDLVLLTAGPDKGKTGTLIGLEETLGSKGEKKKSGIVKLDNTIGRVSKIREIKVVPYAIVAKRL 293
BLAST of mRNA_H-canaliculatus_F_contig1361.2912.1 vs. uniprot
Match: A0A7R9UEJ4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UEJ4_9STRA) HSP 1 Score: 105 bits (262), Expect = 6.640e-22 Identity = 54/165 (32.73%), Postives = 92/165 (55.76%), Query Frame = 3
Query: 585 ETIQGLAPYLDEVEYLITARSWDYLKGFLGVFATCEEDFVSLIDGMYPTDRPVDVSARDSMQLEAQNVFLAVDDLYHASMSKKVKSSEKAYVKLALSYDRFLKAGNIVPIYDPVSSTEKFFNDIPDDMLRYERDSKVPLAVRDAVLILKGPDKGRTAIIVGIVSS 1079
E I+ +A LD+++ I W ++ + + F D +P++ +D R +++ E F AV+ L A S+ + +E ++ ++++S+DR+LKAGN+ YDP+ STEKF+ IPD L + S RD VL++ GPDKG+T +++GI S
Sbjct: 42 EKIRRIARILDDLQRDIFEEDWTFISTYPVELRSFVPIFTKYTDTAFPSESAIDTQTRFALRYEVGRFFGAVERLKRAVDSRDIGEAEASFAQISISFDRYLKAGNLYEQYDPIVSTEKFYEGIPDKDLVFVPPSAETPKTRDPVLLIAGPDKGKTGLLIGIEQS 206 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1361.2912.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1361.2912.1 >prot_H-canaliculatus_F_contig1361.2912.1 ID=prot_H-canaliculatus_F_contig1361.2912.1|Name=mRNA_H-canaliculatus_F_contig1361.2912.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=397bp MDPSSTMAGRSLLLFLVLEAICRSTASDCAFVASTLSARRHRHGNEGRIQback to top mRNA from alignment at H-canaliculatus_F_contig1361:16567..23410+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig1361.2912.1 ID=mRNA_H-canaliculatus_F_contig1361.2912.1|Name=mRNA_H-canaliculatus_F_contig1361.2912.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=6844bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1361:16567..23410+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1361:16567..23410+ >mRNA_H-canaliculatus_F_contig1361.2912.1 ID=mRNA_H-canaliculatus_F_contig1361.2912.1|Name=mRNA_H-canaliculatus_F_contig1361.2912.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=2382bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1361:16567..23410+ (Hapterophycus canaliculatus Oshoro5f female)back to top |