mRNA_H-canaliculatus_F_contig1353.2861.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig1353.2861.1 vs. uniprot
Match: D7FLV2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLV2_ECTSI) HSP 1 Score: 183 bits (464), Expect = 1.860e-48 Identity = 125/366 (34.15%), Postives = 184/366 (50.27%), Query Frame = 3
Query: 864 PLSFVGIATVVSNRITRKINLSLALLFASGALLTTAVVHIIPEAMEELALEYPDDLHGVFLRSGTTVMAGILLGFLLHVALDNGSGHSHSTEQLQPLPVPGRGVDGTPRGATKVITPTGDDDDNSGLGRGDHSKGGASLSNDTFGSRDGHPINAEAIGVKQLSSNVSNRGNERISGGDQ-TVGPISRSGSAHQEVTVAEDCRSCGGLAETEDGRRRVSRPSDPIEATVLGGKSDIDARLQCVESSPGGGVTERRVKSTRQDGKRDRALFDVAGLDPICWNVIVGDFAHNFSDGVTMAAAFLGCSPTVGWTITAANMMHEIPHELGNFIALVNGGMSTKQALLYNFFSASFAVLGVLLTFILRDLIS 1958
P SF G+ VV+ R+ I LS A +FASGALLT A++HIIPEAME L Y D+LH + L + TV++G+ + ++H ++ SGHSHS + + G + + P G G G H++ ++ +A + L ++ GD+ + P G++ Q V + D V++P P E++ R ++G R+L DV GL P+CWNV++GD HNF+DGVT+ AAFL CS T+GWT+TA+ ++HE+PHE+ +F+AL+NGGMS KQA YNF SA AVLG ++ L D +S
Sbjct: 3 PRSFAGLLVVVNKRVAYSIGLSHAFIFASGALLTAALLHIIPEAMEGLDSSY-DNLHDLGLYASLTVLSGLFVSIVIHGLME--SGHSHSPNEAH-----------SHGGGEETVRPGG--------GNGHHAR-----------------VSDDASTMMPLG----------LAEGDKVSAWP---GGNSPQAVQIQAD----------------VTQPPSPAESST----------------------DNLRALIAEREG---RSLLDVKGLQPVCWNVVIGDLVHNFADGVTIGAAFLTCSATIGWTVTASAVLHELPHEIADFMALLNGGMSLKQAFAYNFLSALSAVLGTIIILSLGDTLS 275
BLAST of mRNA_H-canaliculatus_F_contig1353.2861.1 vs. uniprot
Match: A0A6H5L662_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L662_9PHAE) HSP 1 Score: 181 bits (458), Expect = 8.670e-46 Identity = 126/363 (34.71%), Postives = 175/363 (48.21%), Query Frame = 3
Query: 870 SFVGIATVVSNRITRKINLSLALLFASGALLTTAVVHIIPEAMEELALEYPDDLHGVFLRSGTTVMAGILLGFLLHVALDNGSGHSHSTEQLQPLPVPGRGVDGTPRGATKVITPTGDDDDNSGLGRGDHSKGGASLSNDTFGSRDGHPINAEAIGVKQLSSNVSNRGNERISGGDQTVGPISRSGSAHQEVTVAEDCRSCGGLAETEDGRRRVSRPSDPIEATVLGGKSDIDARLQCVESSPGGGVTERRVKSTRQDGKRDRALFDVAGLDPICWNVIVGDFAHNFSDGVTMAAAFLGCSPTVGWTITAANMMHEIPHELGNFIALVNGGMSTKQALLYNFFSASFAVLGVLLTFILRDLIS 1958
SF G+ V + R+ I LS A +FASGALLT A+VHIIPEAME L Y D+LH + L +G TV+ G+ + ++H ++ SGHSHS + + G T+ + P G G G H+ R+S G T P+ G A + A G + V++P P E++ ++ I R R+L DV GL P+CWNV++GD HNF+DG+T+ AAFL CS TVGWT+TA+ ++HE+PHE+ +F+AL+NGGMS KQA YNF SA AVLG ++ L D +S
Sbjct: 203 SFAGLLVVANKRVAYSIGLSHAFIFASGALLTAALVHIIPEAMEGLDSSY-DNLHDLGLYAGLTVLGGLSVSVVIHGLME--SGHSHSPHEGH-----------SHGGGTETVRPGG--------GHGHHA---------------------------------------RVSDGAGTTMPL---GMAEGDKVSAWPG---GNSPHAVQIQADVTQPPSPAESSTDNLRALIAERA-------------------------GRSLLDVKGLQPVCWNVVIGDLVHNFADGLTIGAAFLTCSATVGWTVTASAVLHELPHEIADFMALLNGGMSLKQAFAYNFLSALSAVLGTIIILALGDTLS 473
BLAST of mRNA_H-canaliculatus_F_contig1353.2861.1 vs. uniprot
Match: D7FLW4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLW4_ECTSI) HSP 1 Score: 165 bits (417), Expect = 1.880e-40 Identity = 116/363 (31.96%), Postives = 157/363 (43.25%), Query Frame = 3
Query: 870 SFVGIATVVSNRITRKINLSLALLFASGALLTTAVVHIIPEAMEELALEYPDDLHGVFLRSGTTVMAGILLGFLLHVALDNGSGHSHSTEQLQPLPVPGRGVDGTPRGATKVITPTGDDDDNSGLGRGDHSKGGASLSNDTFGSRDGHPINAEAIGVKQLSSNVSNRGNERISGGDQTVGPISRSGSAHQEVTVAEDCRSCGGLAETEDGRRRVSRPSDPIEATVLGGKSDIDARLQCVESSPGGGVTERRVKSTRQDGKRDRALFDVAGLDPICWNVIVGDFAHNFSDGVTMAAAFLGCSPTVGWTITAANMMHEIPHELGNFIALVNGGMSTKQALLYNFFSASFAVLGVLLTFILRDLIS 1958
SF GI V S + I+LS A +FASGALLT A++HIIPEA+E L Y LH + L +G VM G+ LG +LH L+ SGHSHS G + A + G A G + P P+E+ SD LQ + S+ ++ ++L DV GL+P+CWNVI GD HNF+DGV + AAFL CS T+GWT+ A+ ++HE+PHE+ +F+AL+NGGMS QA +YNF SA AVLG ++ L+D +S
Sbjct: 197 SFAGIVVVASKHVANNIDLSHAFVFASGALLTAALLHIIPEALEGLEESY-GSLHDLGLYAGLAVMGGMSLGIVLHALLE--SGHSHSP------------------------------------------------------------------------------------------------GESXXXXXXAVEAGGGGAKASAYTGTSEATLPPSPVESN-----SD---NLQALISA-----------------RKGKSLLDVKGLEPVCWNVIAGDLVHNFADGVAIGAAFLSCSTTMGWTVAASVVLHEVPHEVADFMALLNGGMSLMQAFVYNFLSALSAVLGTVIILALQDTLS 435
BLAST of mRNA_H-canaliculatus_F_contig1353.2861.1 vs. uniprot
Match: D8LNP7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNP7_ECTSI) HSP 1 Score: 129 bits (324), Expect = 5.800e-29 Identity = 59/103 (57.28%), Postives = 78/103 (75.73%), Query Frame = 3
Query: 1650 RDRALFDVAGLDPICWNVIVGDFAHNFSDGVTMAAAFLGCSPTVGWTITAANMMHEIPHELGNFIALVNGGMSTKQALLYNFFSASFAVLGVLLTFILRDLIS 1958
++R+LFD+ GL P+CWNVI G+ HNF+DGVT+ AAFL C ++GWTITA+ ++HEIP EL +FIAL+ GGMS KQA L+NF SA VLG ++ LR +S
Sbjct: 195 KERSLFDLKGLKPVCWNVIAGELVHNFADGVTIGAAFLTCGSSMGWTITASTVLHEIPQELADFIALLAGGMSLKQAFLFNFLSALTCVLGAVVILSLRSQLS 297
BLAST of mRNA_H-canaliculatus_F_contig1353.2861.1 vs. uniprot
Match: D7FRW4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRW4_ECTSI) HSP 1 Score: 124 bits (310), Expect = 2.440e-26 Identity = 57/101 (56.44%), Postives = 74/101 (73.27%), Query Frame = 3
Query: 1647 KRDRALFDVAGLDPICWNVIVGDFAHNFSDGVTMAAAFLGCSPTVGWTITAANMMHEIPHELGNFIALVNGGMSTKQALLYNFFSASFAVLGVLLTFILRD 1949
++ RALFD GL PICWNVIVGD H+F+ G T+ AAFL C T+GWTITA+ ++HE+P E+ +F+AL+NGGMS KQAL +N S A+LG +L L D
Sbjct: 334 RKGRALFDFKGLKPICWNVIVGDAVHSFTCGFTIGAAFLSCGSTMGWTITASTLIHEVPSEMADFVALLNGGMSIKQALTWNLVSGIPAILGAVLILALGD 434
BLAST of mRNA_H-canaliculatus_F_contig1353.2861.1 vs. uniprot
Match: A0A6H5KN39_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN39_9PHAE) HSP 1 Score: 122 bits (306), Expect = 8.270e-26 Identity = 57/101 (56.44%), Postives = 74/101 (73.27%), Query Frame = 3
Query: 1647 KRDRALFDVAGLDPICWNVIVGDFAHNFSDGVTMAAAFLGCSPTVGWTITAANMMHEIPHELGNFIALVNGGMSTKQALLYNFFSASFAVLGVLLTFILRD 1949
++ RALFD GL PICWNVIVGD H+F+ G T+ AAFL C T+GWTITA+ ++HE+P E+ +F+AL+NGGMS KQAL +N S A+LG +L L D
Sbjct: 330 RKGRALFDFKGLKPICWNVIVGDAVHSFTCGFTIGAAFLSCGSTMGWTITASTLIHEVPSEMADFVALLNGGMSIKQALTWNLASGIPAILGAVLILGLGD 430
BLAST of mRNA_H-canaliculatus_F_contig1353.2861.1 vs. uniprot
Match: UPI0019874E3E (ZIP family metal transporter n=1 Tax=Pyrinomonadaceae bacterium TaxID=2283092 RepID=UPI0019874E3E) HSP 1 Score: 84.7 bits (208), Expect = 1.760e-14 Identity = 39/86 (45.35%), Postives = 59/86 (68.60%), Query Frame = 3
Query: 1686 PICWNVIVGDFAHNFSDGVTMAAAFLGCSPTVGWTITAANMMHEIPHELGNFIALVNGGMSTKQALLYNFFSASFAVLGVLLTFIL 1943
P+ W +VG HNF DG T+A +F+ +PT+G T A ++HE+P E+G+F L +GG+S K+ALL+NF ++ F+VLG L +L
Sbjct: 127 PLVWLNLVGGAIHNFVDGATIAVSFM-LNPTIGLTTVVATVLHEVPREIGDFAVLTHGGLSVKRALLFNFLTSIFSVLGALAVLLL 211
BLAST of mRNA_H-canaliculatus_F_contig1353.2861.1 vs. uniprot
Match: L1IGI1_GUITC (Uncharacterized protein n=3 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IGI1_GUITC) HSP 1 Score: 86.3 bits (212), Expect = 3.220e-14 Identity = 47/124 (37.90%), Postives = 65/124 (52.42%), Query Frame = 3
Query: 1584 VESSPGGGVTERRVKSTRQDGKRDRALFDVAGLD-------PICW----NVIVGDFAHNFSDGVTMAAAFLGCSPTVGWTITAANMMHEIPHELGNFIALVNGGMSTKQALLYNFFSASFAVLG 1922
+E G + + Q+ + AL LD P+ W N+++GDF HNF DGV+ A AF C +GW + A + HE+P ELG+F+ L N GMS K AL+ NF S+ A LG
Sbjct: 251 IEGGTGTSPRKGELVFVDQEAQDHMALSSQKALDGDAVQDKPVAWGRIGNILLGDFFHNFFDGVSTAIAFKYCGSGLGWVVVGAAVAHELPQELGDFVVLYNSGMSIKWALISNFLSSLSACLG 374
BLAST of mRNA_H-canaliculatus_F_contig1353.2861.1 vs. uniprot
Match: A0A7S0HB34_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0HB34_9CRYP) HSP 1 Score: 86.7 bits (213), Expect = 3.620e-14 Identity = 44/101 (43.56%), Postives = 62/101 (61.39%), Query Frame = 3
Query: 1638 QDGKRDRALFDVAGLDPICW----NVIVGDFAHNFSDGVTMAAAFLGCSPTVGWTITAANMMHEIPHELGNFIALVNGGMSTKQALLYNFFSASFAVLGVL 1928
QD +AL + + + W N+++GDF HNF DGV+ A AF C +GW + A+++HE+P EL +F+ L N GMS K AL+ NF S+ AVLG L
Sbjct: 319 QDRPDTKALANEDVQEIVQWGRIGNILIGDFFHNFFDGVSTAIAFKFCGSGLGWVVVGASVVHELPQELSDFVVLYNSGMSIKWALISNFLSSLSAVLGSL 419
BLAST of mRNA_H-canaliculatus_F_contig1353.2861.1 vs. uniprot
Match: A0A8B7NZG0_HYAAZ (uncharacterized protein LOC108675621 n=2 Tax=Hyalella azteca TaxID=294128 RepID=A0A8B7NZG0_HYAAZ) HSP 1 Score: 84.7 bits (208), Expect = 2.180e-13 Identity = 44/91 (48.35%), Postives = 60/91 (65.93%), Query Frame = 3
Query: 1680 LDPICWNVIVGDFAHNFSDGVTMAAAFLGCSPTVGWTITAANMMHEIPHELGNFIALVNGGMSTKQALLYNFFSASFAVLGVLLTFILRDL 1952
+ + W +IVGD HNF DGV+M AAF S T G +I+ A M E+PHELG+F L+N GMS +QAL+YNF SA+ G+ L +L ++
Sbjct: 491 IKTVAWMIIVGDGFHNFLDGVSMGAAF-SVSWTTGVSISLAVMCEELPHELGDFAVLLNAGMSMRQALMYNFLSATTCYAGLALGILLGEI 580 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1353.2861.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1353.2861.1 >prot_H-canaliculatus_F_contig1353.2861.1 ID=prot_H-canaliculatus_F_contig1353.2861.1|Name=mRNA_H-canaliculatus_F_contig1353.2861.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=322bp MEELALEYPDDLHGVFLRSGTTVMAGILLGFLLHVALDNGSGHSHSTEQLback to top mRNA from alignment at H-canaliculatus_F_contig1353:12300..14552+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig1353.2861.1 ID=mRNA_H-canaliculatus_F_contig1353.2861.1|Name=mRNA_H-canaliculatus_F_contig1353.2861.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=2253bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1353:12300..14552+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1353:12300..14552+ >mRNA_H-canaliculatus_F_contig1353.2861.1 ID=mRNA_H-canaliculatus_F_contig1353.2861.1|Name=mRNA_H-canaliculatus_F_contig1353.2861.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1932bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1353:12300..14552+ (Hapterophycus canaliculatus Oshoro5f female)back to top |