prot_H-canaliculatus_F_contig13516.2852.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig13516.2852.1
Unique Nameprot_H-canaliculatus_F_contig13516.2852.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length44
Homology
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BLAST of mRNA_H-canaliculatus_F_contig13516.2852.1 vs. uniprot
Match: D7FML5_ECTSI (Putative: similar to cytoplasmic dynein intermediate chain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FML5_ECTSI)

HSP 1 Score: 84.3 bits (207), Expect = 6.570e-18
Identity = 37/39 (94.87%), Postives = 38/39 (97.44%), Query Frame = 0 
Query:    4 SPKHPALFVTANISGELGLWNLNHSMEEPFTPPVKVLHR 42
            SPKHPALFVTANISGELGLWNLNHSMEEPFTPPVKV+ R
Sbjct:  604 SPKHPALFVTANISGELGLWNLNHSMEEPFTPPVKVVDR 642
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BLAST of mRNA_H-canaliculatus_F_contig13516.2852.1 vs. uniprot
Match: A0A836C896_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C896_9STRA)

HSP 1 Score: 55.8 bits (133), Expect = 7.120e-8
Identity = 22/36 (61.11%), Postives = 28/36 (77.78%), Query Frame = 0 
Query:    4 SPKHPALFVTANISGELGLWNLNHSMEEPFTPPVKV 39
            SP HPALF TAN++G+L LWN+  S++ P TPP KV
Sbjct:  386 SPVHPALFATANVAGDLTLWNVTASLDTPVTPPCKV 421
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BLAST of mRNA_H-canaliculatus_F_contig13516.2852.1 vs. uniprot
Match: A0A7S1TZA0_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TZA0_9STRA)

HSP 1 Score: 47.0 bits (110), Expect = 9.610e-5
Identity = 19/29 (65.52%), Postives = 23/29 (79.31%), Query Frame = 0 
Query:    4 SPKHPALFVTANISGELGLWNLNHSMEEP 32
            SP HPALF TAN  G++ +W+LN SMEEP
Sbjct:  620 SPDHPALFATANSVGQVDVWHLNRSMEEP 648
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig13516.2852.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FML5_ECTSI6.570e-1894.87Putative: similar to cytoplasmic dynein intermedia... [more]
A0A836C896_9STRA7.120e-861.11WD40-repeat-containing domain protein n=1 Tax=Trib... [more]
A0A7S1TZA0_9STRA9.610e-565.52Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig13516contigH-canaliculatus_F_contig13516:2704..2835 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig13516.2852.1mRNA_H-canaliculatus_F_contig13516.2852.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig13516 2704..2835 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig13516.2852.1 ID=prot_H-canaliculatus_F_contig13516.2852.1|Name=mRNA_H-canaliculatus_F_contig13516.2852.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=44bp
SDRSPKHPALFVTANISGELGLWNLNHSMEEPFTPPVKVLHRK*
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