mRNA_H-canaliculatus_F_contig135.2832.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig135.2832.1
Unique NamemRNA_H-canaliculatus_F_contig135.2832.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
[Close]
BLAST of mRNA_H-canaliculatus_F_contig135.2832.1 vs. uniprot
Match: D7FRA5_ECTSI (Kynurenine 3-Monooxygenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRA5_ECTSI)

HSP 1 Score: 305 bits (782), Expect = 4.360e-91
Identity = 150/252 (59.52%), Postives = 194/252 (76.98%), Query Frame = 3 
Query:  432 AGDLVVTTSGSVRHNAKKKVGGGPAVGTKSICRGDLAKALLNKARRSPNVNVHFSCTFSTMDVERRVATFERGNGETFESSFDMLVGADGVNSRVRQAVQDQKPGFTVQQREGTKIFKTFEVPIMDMEGADEGWKSCIHSSNSKKGSVVASPRSDGVASAALMLPRGRKETFETLMKTTQDVRDYFGSNHPGLYGPEGPSEEVARKFLEQRTKLSRTVYCSQLNFGSVVLIGDAAHAMQASLGQGVNCALGE 1187
            AG+ ++T +GS+RH+ K+K      + + SICRGD AKALLNKA + PNVNVHF CTFS +D+E+RVATFERGNG+  ES +DML+GADGVNSRVR+ +++  P FTV+QRE    FKT  +PIM+MEGADEGWK   H +NS  G ++A PRSDG+ +A ++LP   K +F+ LMKTTQDVRD+FG  +P  +G EGPSEEVA++FLE+RT+  R+ YCS+L  GS+ LIGDAAH+M ASLGQGVN AL +
Sbjct:   81 AGERLLTLAGSLRHHKKEKTSKF-FLDSLSICRGDFAKALLNKASKVPNVNVHFGCTFSKVDMEQRVATFERGNGDVVESEYDMLIGADGVNSRVRKELEENVPDFTVRQREDPMAFKTILIPIMNMEGADEGWKKRFHVTNSDIGCIIAPPRSDGMLTATVVLPSEGKTSFDALMKTTQDVRDFFGHYYPSAFGHEGPSEEVAKEFLERRTQQLRSTYCSRLAHGSIFLIGDAAHSMWASLGQGVNAALED 331
[Close]
BLAST of mRNA_H-canaliculatus_F_contig135.2832.1 vs. uniprot
Match: D8LSX9_ECTSI (Kynurenine 3-Monooxygenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSX9_ECTSI)

HSP 1 Score: 165 bits (418), Expect = 1.470e-43
Identity = 81/146 (55.48%), Postives = 103/146 (70.55%), Query Frame = 3 
Query:  627 RVATFERGNGETFESSFDMLVGADGVNSRVRQAVQDQKPGFTVQQREGTKIFKTFEVPIMDMEGADEGWKSCIHSSNSKKGSVVASPRSDGVASAALMLPRGRKETFETLMKTTQDVRDYFGSNHPGLYGPEGPSEEVARKFLEQR 1064
            RVA FERGNG+  E  +DMLVGADGVNSRVR+++++  P FTV+QRE    FKT E+PIM ME ADE WK   H  NS+ G + A+PR  G  +A ++LP   K +F  LMKTTQDVR +FG ++P  +G EGPS EVA+ F E+R
Sbjct:   13 RVAIFERGNGDVVEVGYDMLVGADGVNSRVRKSLEESVPDFTVRQREDHMAFKTIEIPIMGMEEADESWKERFHVINSEVGCIGAAPRPGGKLTAVVILPSSGKTSFGALMKTTQDVRGFFGRHYPSAFGGEGPSVEVAKDFHERR 158
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BLAST of mRNA_H-canaliculatus_F_contig135.2832.1 vs. uniprot
Match: A0A835Z226_9STRA (FAD_binding_3 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z226_9STRA)

HSP 1 Score: 153 bits (387), Expect = 3.390e-36
Identity = 101/258 (39.15%), Postives = 144/258 (55.81%), Query Frame = 3 
Query:  438 DLVVTTSGSVRHNAKKKVGGGPAVGTKSICRGDLAKALLNKARRSPNVNVHFSCTFSTMDVERRVATFE--RGNGETFESSFDMLVGADGVNSRVRQAVQDQKPGFTVQQREGTKIFKTFEV-PIMDMEGADEG--WKSCIHS-SNSKKG-SVVASPRSDGVASAALMLPRGRKETFETLMKTTQDVRDYFGSNHPGLYGPEGPSE--EVARKFLE-QRTKLSRTVYCSQLNFGSVVLIGDAAHAMQASLGQGVNCAL 1181
            D+    +G+V+H+A+     G    + SI RGDLA+ LL++A   PNV VH+      +DV   V TF      G      +D+LVGADGV S VR A+QDQ PGFT +  E  + +KT E+  +  + G D    W+   H  +N+++G +++  PR     SAAL+LPR    +FE +  T + V  +     P L    G ++  +V R+ L  Q  + +RTVYCS L  G + L+GDAAHAM A+LGQGVN AL
Sbjct:   48 DVATVIAGTVQHDAEPATRQGLGQRSISIDRGDLAQLLLDRAAALPNVRVHYLHLLGGVDVANSVVTFSIVGAEGTHVSQEYDLLVGADGVRSGVRSAMQDQVPGFTAKVVEEDQQYKTVELGDVRALRGYDPSLNWEDRAHFWTNARRGVALLCPPRRGTAVSAALVLPRRGAHSFEAMGTTAESVSAFLMRALPTLQRDVGDAQFGDVVRQLLSGQAPRSNRTVYCSALACGRMALVGDAAHAMSAALGQGVNSAL 305
[Close]
BLAST of mRNA_H-canaliculatus_F_contig135.2832.1 vs. uniprot
Match: A0A6P0S6X8_9CYAN (FAD-dependent monooxygenase n=4 Tax=unclassified Symploca TaxID=2620434 RepID=A0A6P0S6X8_9CYAN)

HSP 1 Score: 119 bits (297), Expect = 1.360e-24
Identity = 88/255 (34.51%), Postives = 138/255 (54.12%), Query Frame = 3 
Query:  447 VTTSGSVRHNAKKKVGGGPAVGTKSICRGDLAKALLNKAR-RSPN-VNVHFSCTFSTMDVERRVATFERGNGETFESSFDMLVGADGVNSRVRQAVQDQKPGFTVQQREGTKIFKTFEVPIM-DMEGADEGWKSCIHSSNSKKG-SVVASPRSDGVASAALMLPRGRKETFETLMKTTQDVRDYFGSNHPGLYGPE----GPSEEVARKFLEQRTKLSR-TVYCSQLNFGS-VVLIGDAAHAMQASLGQGVNCAL 1181
            V   G+VRH AK          + SI R  LA++L+ + + R P+ +  HF  T   ++++ ++A F+   GE  +  F +L+GADGV S VR A++ Q  GF VQQ     +FK  ++ +  D+ GA E W SC H+  S +  +++A P++DG  +  L+LP+  + T+E + +T + V + F    P ++ PE    G     A+  L Q+      T  C+    G  VVL+GDAAH++  SLGQG N AL
Sbjct:   85 VILQGNVRHTAKGTTLSKGFANSVSIDRYTLAQSLIEEGKHRFPHKIQYHFQQTLHQVNLKEKIALFKGELGE-HQQEFHLLIGADGVFSTVRSAMEAQIQGFQVQQNRDNMMFKICQLGLAKDLPGATETWTSCFHTWPSVQPITLLAPPKTDGSLNGVLILPQEGEITYEQI-QTEEAVAELFAKKFPDIF-PELDQKGLPSGFAQDLLGQKAAYGGVTTICTGFEGGDGVVLLGDAAHSVWPSLGQGCNVAL 336
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BLAST of mRNA_H-canaliculatus_F_contig135.2832.1 vs. uniprot
Match: UPI001F2C4A8C (FAD-dependent monooxygenase n=2 Tax=Acaryochloris TaxID=155977 RepID=UPI001F2C4A8C)

HSP 1 Score: 116 bits (291), Expect = 7.810e-24
Identity = 83/257 (32.30%), Postives = 135/257 (52.53%), Query Frame = 3 
Query:  438 DLVVTTSGSVRHNAKKKVGGGPAVGTKSICRGDLAKALLNKAR-RSP-NVNVHFSCTFSTMDVERRVATFERGNGETFESSFDMLVGADGVNSRVRQAVQDQKPGFTVQQREGTKIFKTFEVPIM-DMEGADEGWKSCIHS-SNSKKGSVVASPRSDGVASAALMLPRGRKETFETLMKTTQDVRDYFGSNHPGLY---GPEGPSEEVARKFLEQRTKLSR-TVYCSQLNFGS-VVLIGDAAHAMQASLGQGVNCAL 1181
            D  V   G+VRH AK    G       S+ R  LA+ L+ + + R P N+  HF  T   ++ + + A F+ G  +  + +FD+L+GADGV S VR +++ Q  GF V+Q + + ++K  ++    D+ G ++ W    H+  N++  +++A P +DG     L+LP+    T+ET+ +T  D+   F    P ++      G   + A+  L Q+      T  C+Q   G  VVL+GDAAH++  SLGQG N AL
Sbjct:   82 DKQVLLQGNVRHTAKGGALGKGFRDAVSVDRATLAQVLIAEGQHRFPENIQYHFDQTLLQVNFQDKTALFQ-GKQDQQQQNFDLLIGADGVFSTVRTSMESQLQGFEVRQNQDSMMYKICDLGFAKDLPGVEQKWAESFHTWPNAQPLTLLAPPSTDGSLKGVLILPQAGDITYETI-QTEADILALFKEKFPDVFPSLDQAGLPPQFAQDLLSQKAAHGGITTQCNQFEGGDCVVLLGDAAHSVWPSLGQGCNVAL 336
[Close]
BLAST of mRNA_H-canaliculatus_F_contig135.2832.1 vs. uniprot
Match: D8LSY0_ECTSI (FAD_binding_3 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSY0_ECTSI)

HSP 1 Score: 109 bits (273), Expect = 8.200e-24
Identity = 61/135 (45.19%), Postives = 90/135 (66.67%), Query Frame = 2 
Query: 1598 EDCQVLANLM-AAETRKAGGTQVNHIPQVLDAYNKLRLEDVHAVCKLSE--IGSALGIRKTLTAQLMLTVMLSKTLGRLAPKVFPPPSLLAINAKNSRYGAVMRGFKREAAVAKGVGFASIALVLVGVARRVILR 1993
            EDC+VLA ++ +A   +A   Q   +P  L+A+N+ RLED  A C LSE  +G A   R    A+L LTV+L KTLGR+AP++F PPS++ +N+ + RYG ++RG +RE AVA G+ F ++A+V+  VA R + R
Sbjct:   46 EDCRVLAQVLDSAAEGEAAAAQGIDVPGALEAFNEQRLEDATAACVLSERGMGGARTFRPMFAARLYLTVLLHKTLGRVAPEMFTPPSIMTVNSADKRYGDILRGVEREDAVASGLLFGTVAMVVAAVATRFMRR 180
[Close]
BLAST of mRNA_H-canaliculatus_F_contig135.2832.1 vs. uniprot
Match: A0A3C1RTQ1_9CYAN (FAD-dependent monooxygenase n=3 Tax=unclassified Planktothrix TaxID=2648599 RepID=A0A3C1RTQ1_9CYAN)

HSP 1 Score: 115 bits (287), Expect = 2.380e-23
Identity = 83/254 (32.68%), Postives = 134/254 (52.76%), Query Frame = 3 
Query:  447 VTTSGSVRHN---AKKKVGGGPAVGTKSICRGDLAKALLNKA--RRSPNVNVHFSCTFSTMDVERRVATFERGNGETFESSFDMLVGADGVNSRVRQAVQDQKPGFTVQQREGTKIFKTFEV-PIMDMEGADEGWKSCIHS-SNSKKGSVVASPRSDGVASAALMLPRGRKETFETLMKTTQDVRDYFGSNHPGLYGPEGPSEEVARKFLEQRTKLSR-TVYCSQLNFG-SVVLIGDAAHAMQASLGQGVNCAL 1181
            V   G+VRH+   AKK  G   AV   S+ R  LA+ LL +   R   ++  +F+     ++ E+++ATF+    +  +S FD+LVGADGV S VR+ +  Q   F+  Q      FK  ++    +   +   W+ C H+  N++  +++A P  DG  +  L+LP+  + TF+ + KT  D+   F +  P ++  +   ++     L Q+  L   T  C+  + G SVVL+GDAAH++ ASLGQG N AL
Sbjct:   85 VVLKGNVRHSTKGAKKSPGFSEAV---SVNRNILAQHLLKEGITRFPEHIKYYFNHRLEGINFEQKLATFQIEEKQVSQS-FDLLVGADGVFSTVREIIVQQFDEFSADQNHDQMTFKICQLGKATNFTNSTPDWEECFHTWPNTQPVTMLAPPNPDGTLTGVLILPQQSEITFDKI-KTENDINALFSAKFPDIFMGKPIPQDWVEDLLAQKVSLGGITTICNHFHAGNSVVLVGDAAHSVWASLGQGCNVAL 333
[Close]
BLAST of mRNA_H-canaliculatus_F_contig135.2832.1 vs. uniprot
Match: B0C0P2_ACAM1 (Kynurenine 3-monooxygenase, putative n=3 Tax=Acaryochloris TaxID=155977 RepID=B0C0P2_ACAM1)

HSP 1 Score: 114 bits (286), Expect = 3.700e-23
Identity = 84/254 (33.07%), Postives = 134/254 (52.76%), Query Frame = 3 
Query:  447 VTTSGSVRHNAKKKVGGGPAVGTKSICRGDLAKALLNKAR-RSP-NVNVHFSCTFSTMDVERRVATFERGNGETFESSFDMLVGADGVNSRVRQAVQDQKPGFTVQQREGTKIFKTFEVPIM-DMEGADEGWKSCIHS-SNSKKGSVVASPRSDGVASAALMLPRGRKETFETLMKTTQDVRDYFGSNHPGLYG---PEGPSEEVARKFLEQRTKLSR-TVYCSQLNFGS-VVLIGDAAHAMQASLGQGVNCAL 1181
            V   G+VRH AK    G       S+ R  LA+ L+ + + R P N+  HF  T   ++ + + A F+ G  +  + +FD+L+GADGV S VR +++ Q  GF VQQ +   ++K  ++    ++ GA+E W    H+  N++  +++A P +DG     L+LP+    T+ETL ++  D+   F    P ++      G   + A+  L Q+      T  C+Q   G  VVL+GDAAH++  SLGQG N AL
Sbjct:   93 VFLQGNVRHTAKGANLGKGFQDAVSVDRTTLAQCLIEEGQHRFPENIQYHFEQTLLQVNFQDKTALFQ-GKQDQNQQTFDLLIGADGVYSTVRTSMESQIQGFEVQQNQDNMMYKICDLGFAKNLPGAEEKWAESFHTWPNAQPLTLLAPPSTDGSLKGVLILPQVGDITYETL-QSEADILALFQEKFPDVFPNLEQTGLPSQFAQDLLSQKAAHGGITTQCNQFEGGDCVVLLGDAAHSVWPSLGQGCNVAL 344
[Close]
BLAST of mRNA_H-canaliculatus_F_contig135.2832.1 vs. uniprot
Match: UPI001BAE8264 (FAD-dependent monooxygenase n=2 Tax=Acaryochloris TaxID=155977 RepID=UPI001BAE8264)

HSP 1 Score: 114 bits (285), Expect = 4.740e-23
Identity = 80/254 (31.50%), Postives = 133/254 (52.36%), Query Frame = 3 
Query:  447 VTTSGSVRHNAKKKVGGGPAVGTKSICRGDLAKALLN--KARRSPNVNVHFSCTFSTMDVERRVATFERGNGETFESSFDMLVGADGVNSRVRQAVQDQKPGFTVQQREGTKIFKTFEVPIMD-MEGADEGWKSCIHS-SNSKKGSVVASPRSDGVASAALMLPRGRKETFETLMKTTQDVRDYFGSNHPGLY---GPEGPSEEVARKFLEQRTKLSR-TVYCSQLNFG-SVVLIGDAAHAMQASLGQGVNCAL 1181
            V   G++RH  K       +  + S+ R  LA++L+   K R   N+  +F  T   ++++ + A F+  +G+  E  FD+LVGADG++S VR ++  Q  GF V+Q     ++K   + + + + GA  GW    H    ++  ++ A P +DG   A L+LP+  + TF+T+ +T  D+   F +  P ++      G   + A+  L Q+      T  C++   G SVVL+GDAAH++  SLGQG N AL
Sbjct:   85 VYIQGNIRHTEKDSTLRKGSRNSVSVDRHTLAQSLITEGKNRFPDNIQYYFDQTLLQLNIQDKSALFQEASGQ-HEEKFDLLVGADGISSTVRHSMSSQLQGFEVRQHADNMMYKICNLGLAENLPGATAGWADAFHVWPGAEPVTMAAPPSADGFIRAVLILPQEGEITFDTI-QTEADISALFKAKLPVVFHNLDQTGLPPDFAQDLLSQKAAHGGFTTLCNRFEDGDSVVLLGDAAHSIWPSLGQGCNAAL 336
[Close]
BLAST of mRNA_H-canaliculatus_F_contig135.2832.1 vs. uniprot
Match: B0C034_ACAM1 (FAD_binding_3 domain-containing protein n=1 Tax=Acaryochloris marina (strain MBIC 11017) TaxID=329726 RepID=B0C034_ACAM1)

HSP 1 Score: 112 bits (280), Expect = 2.040e-22
Identity = 81/257 (31.52%), Postives = 132/257 (51.36%), Query Frame = 3 
Query:  438 DLVVTTSGSVRHNAKKKVGGGPAVGTKSICRGDLAKALL--NKARRSPNVNVHFSCTFSTMDVERRVATFERGNGETFESSFDMLVGADGVNSRVRQAVQDQKPGFTVQQREGTKIFKTFEVPIMD-MEGADEGWKSCIHS-SNSKKGSVVASPRSDGVASAALMLPRGRKETFETLMKTTQDVRDYFGSN----HPGLYGPEGPSEEVARKFLEQRTKLSRTVYCSQLNFGS-VVLIGDAAHAMQASLGQGVNCAL 1181
            D  V  +G++RH  K  +       + S+ R  LA++L+   K R   N+  +F  T   +++  + A F+  +G+  E +FD+L+GADG++S VR ++  Q  GFTV+Q     ++K   + + + + GA   W    H    ++  ++ A P +DGV  A L+LP+  + TF+T+ +T  DV   F +      P L     PS  V     ++      T  C++   G  VVL+GDAAH++  SLGQG N AL
Sbjct:   82 DKQVCITGNIRHTEKDSILRKGFRTSVSVDRHTLAQSLIAEGKNRFPDNIQYYFEQTLLQLNLHDKTALFQEASGQ-HEQTFDLLIGADGISSTVRYSMSSQLEGFTVRQHADDMMYKICNLGLAEHLPGATAEWADAFHVWPGAEPVTMAAPPSADGVIRAVLILPQEGEITFDTI-RTEADVSALFKAKLPVVFPNLDQTGFPSHFVQDLLSQKAAHGGFTTMCNRFEDGDCVVLLGDAAHSIWPSLGQGCNVAL 336
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig135.2832.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRA5_ECTSI4.360e-9159.52Kynurenine 3-Monooxygenase n=1 Tax=Ectocarpus sili... [more]
D8LSX9_ECTSI1.470e-4355.48Kynurenine 3-Monooxygenase n=1 Tax=Ectocarpus sili... [more]
A0A835Z226_9STRA3.390e-3639.15FAD_binding_3 domain-containing protein n=1 Tax=Tr... [more]
A0A6P0S6X8_9CYAN1.360e-2434.51FAD-dependent monooxygenase n=4 Tax=unclassified S... [more]
UPI001F2C4A8C7.810e-2432.30FAD-dependent monooxygenase n=2 Tax=Acaryochloris ... [more]
D8LSY0_ECTSI8.200e-2445.19FAD_binding_3 domain-containing protein n=1 Tax=Ec... [more]
A0A3C1RTQ1_9CYAN2.380e-2332.68FAD-dependent monooxygenase n=3 Tax=unclassified P... [more]
B0C0P2_ACAM13.700e-2333.07Kynurenine 3-monooxygenase, putative n=3 Tax=Acary... [more]
UPI001BAE82644.740e-2331.50FAD-dependent monooxygenase n=2 Tax=Acaryochloris ... [more]
B0C034_ACAM12.040e-2231.52FAD_binding_3 domain-containing protein n=1 Tax=Ac... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig135contigH-canaliculatus_F_contig135:12580..18057 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score119.4
Seed ortholog evalue2e-24
Seed eggNOG ortholog2880.D7FRA5
KEGG rclassRC00046
KEGG koko:K00486
KEGG ReactionR01960
KEGG Pathwayko00380,ko01100,map00380,map01100
KEGG ModuleM00038
EggNOG free text desc.FAD binding
EggNOG OGsCOG0654@1,KOG2614@2759
EC1.14.13.9
COG Functional cat.CH
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Hectar predicted targeting categoryother localisation
Exons6
Model size2678
Cds size621
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig135.2832.1prot_H-canaliculatus_F_contig135.2832.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig135 13259..14064 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929090.315884-UTR-H-canaliculatus_F_contig135:12579..132581622929090.315884-UTR-H-canaliculatus_F_contig135:12579..13258Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig135 12580..13258 -
1696845675.691233-UTR-H-canaliculatus_F_contig135:12579..132581696845675.691233-UTR-H-canaliculatus_F_contig135:12579..13258Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig135 12580..13258 -
1622929090.3826184-UTR-H-canaliculatus_F_contig135:14064..143791622929090.3826184-UTR-H-canaliculatus_F_contig135:14064..14379Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig135 14065..14379 -
1696845675.7291942-UTR-H-canaliculatus_F_contig135:14064..143791696845675.7291942-UTR-H-canaliculatus_F_contig135:14064..14379Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig135 14065..14379 -
1622929090.3981197-UTR-H-canaliculatus_F_contig135:16066..162351622929090.3981197-UTR-H-canaliculatus_F_contig135:16066..16235Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig135 16067..16235 -
1696845675.7406075-UTR-H-canaliculatus_F_contig135:16066..162351696845675.7406075-UTR-H-canaliculatus_F_contig135:16066..16235Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig135 16067..16235 -
1622929090.412759-UTR-H-canaliculatus_F_contig135:16683..168101622929090.412759-UTR-H-canaliculatus_F_contig135:16683..16810Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig135 16684..16810 -
1696845675.7521431-UTR-H-canaliculatus_F_contig135:16683..168101696845675.7521431-UTR-H-canaliculatus_F_contig135:16683..16810Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig135 16684..16810 -
1622929090.4269397-UTR-H-canaliculatus_F_contig135:17080..172191622929090.4269397-UTR-H-canaliculatus_F_contig135:17080..17219Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig135 17081..17219 -
1696845675.7639256-UTR-H-canaliculatus_F_contig135:17080..172191696845675.7639256-UTR-H-canaliculatus_F_contig135:17080..17219Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig135 17081..17219 -
1622929090.439241-UTR-H-canaliculatus_F_contig135:17429..180571622929090.439241-UTR-H-canaliculatus_F_contig135:17429..18057Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig135 17430..18057 -
1696845675.773817-UTR-H-canaliculatus_F_contig135:17429..180571696845675.773817-UTR-H-canaliculatus_F_contig135:17429..18057Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig135 17430..18057 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929090.3338134-CDS-H-canaliculatus_F_contig135:13258..134231622929090.3338134-CDS-H-canaliculatus_F_contig135:13258..13423Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig135 13259..13423 -
1696845675.704149-CDS-H-canaliculatus_F_contig135:13258..134231696845675.704149-CDS-H-canaliculatus_F_contig135:13258..13423Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig135 13259..13423 -
1622929090.350347-CDS-H-canaliculatus_F_contig135:13608..140641622929090.350347-CDS-H-canaliculatus_F_contig135:13608..14064Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig135 13609..14064 -
1696845675.7157779-CDS-H-canaliculatus_F_contig135:13608..140641696845675.7157779-CDS-H-canaliculatus_F_contig135:13608..14064Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig135 13609..14064 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig135.2832.1

>prot_H-canaliculatus_F_contig135.2832.1 ID=prot_H-canaliculatus_F_contig135.2832.1|Name=mRNA_H-canaliculatus_F_contig135.2832.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=207bp
MSRKGLTCGSLSYSSYFETGVVGLISVCRAPHSPFQGVSTRTCFVGFWFL
SLCSERLRSGQKLDWQVQTPPCPEDCQVLANLMAAETRKAGGTQVNHIPQ
VLDAYNKLRLEDVHAVCKLSEIGSALGIRKTLTAQLMLTVMLSKTLGRLA
PKVFPPPSLLAINAKNSRYGAVMRGFKREAAVAKGVGFASIALVLVGVAR
RVILRI*
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mRNA from alignment at H-canaliculatus_F_contig135:12580..18057-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig135.2832.1 ID=mRNA_H-canaliculatus_F_contig135.2832.1|Name=mRNA_H-canaliculatus_F_contig135.2832.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=5478bp|location=Sequence derived from alignment at H-canaliculatus_F_contig135:12580..18057- (Hapterophycus canaliculatus Oshoro5f female)
AGCTTCAATCCTGGTTGCGAGGAGAACCACGTACATGTTGCACATAATGC
TTTGCATCCGGTGCTGTATGTGCAAGACTGTTGATCGCCCGCGGGCCGAA
GGCGGTCCCTGCTGGTTCTGTCCATGTTCCAGTTGAAGCACTACTTTTCT
TCGATCTGACCGGACCTGAACCGTCGGGTAAGAGCGCAAACTGATTTGAC
GTAGCTGTCTTGCGTTGCCCGCGGAAAGCCTTGGATGTTGATCTGTTGAT
GTCTGTTGAAGTGTTGGTGTGTGTGTCTTCTTTGCTGCTGTGAATGACGA
TCCCACAGAGATAATTAGTGTGAGAAATACGGAAGTGAGTGCTGCCAGCT
ACGACTAGAAAACGTATCGCGATCTTCGCACATACGCATTACATCGCCAC
CCGTTTACTTCCTGTGCCGCTTGCTCTCTAGGCTGGTGATCTCGTCGTAA
CCACATCCGGTAGCGTGCGCCACAACGCCAAGAAAAAGGTCGGCGGGGGC
CCCGCCGTTGGAACCAAGAGCATCTGTCGTGGAGACCTCGCGAAGGCTTT
GCTGAATAAGGCGCGGCGGTCTCCAAATGTCAACGTCCACTTCAGCTGCA
CTTTTTCGACGATGGACGTGGAAAGGCGGTGAGGGGCGCCGATCACGACC
ACGGTTCAGCGACGTTGCCTCGCTCACTCGCTCTGTTGCAGATTTTGTCT
CCCGTGCAGGAAGGCAAGACACACCCGGCTCGTGGAGTTGATCGCCTCGC
TCCTGATTCCCATTGGGAAAACCGGTTGTGGCCTATTTGCAGGATCGATA
GACACGTAACGCACCTTCCCCTCAACATTGTGGTACAGGGTCGCCACTTT
CGAGCGCGGGAATGGCGAGACCTTCGAGAGCTCCTTCGACATGCTCGTGG
GCGCGGACGGGGTGAACAGCCGAGTGCGTCAGGCTGTTCAAGACCAAAAA
CCCGGCTTCACTGTGCAGCAACGTGAGGTAATCTGGCATTCGACAACAAC
CGATCTAACGCCCCTCCACGTGCTATCGTAGCGATATCGACGTGGTTGGC
ATTCTTCACGTGTGGCATTCTTCACGGATATCGCGCGCACTGTGTTCATC
CTTGCGGTCGGAGACCCTTTCTACGTTTGTGGAACACGAGCTCTTTCAAA
GCTTGCCGAAGCATGCAAGTGAACCCCATGCAAGTCTGATGCCTGGCGTG
GAAGCCATACCGCCATCACAACGTTTTGTGGTATTTGGTCGATGCAGGGG
ACCAAGATATTCAAGACATTCGAAGTCCCAATCATGGACATGGAAGGCGC
GGATGAGGGTTGGAAGTCATGCATTCATTCGAGTAACTCCAAGAAAGGTT
CAGTCGTCGCCTCCCCGCGGTCAGGTAGGGCGTTAATTGTAGGGCGTTTC
GTGTACTTGGGGCAGGATATCGACACCGTTGCCCGTCGCATGTACCAGTA
TTCTGTGCACTCGCAGGCCCTGTGCTCATTTGCGTTGTTGAACAGCCGGC
GTGTTGCTCAGGTGACCCTGAGAAATACGTTACACGTCGATTTTGAAAAA
ACGATTTTGTAGAACGAGCAGGTAGTCCGGTTTCGGCGCCGTACAAGCAG
TCGGAGCGTATCACCCGGAGCTTTGAACGCACGTGGCATGTGGTTCGCCT
GACGTGGGAGTCGATCACAAAGTGAAAGATGATCGGTGCAACGGGGAGGC
TTGCTTGCTTTGTTCGCTCCATCGAGGATTAAAGGCGAAGCGAACTCTCC
TCGCAGGCAACCGACGTTCTTGCCCGCACACCTCTCCTGCATGGCACTCG
TTCAACCGCATTCGCTTTGCAGACGGAGTTGCCTCGGCTGCACTTATGCT
GCCTCGTGGACGCAAGGAGACGTTCGAGACGCTCATGAAGACGACGCAAG
ACGTGCGTGACTACTTCGGCAGCAATCATCCCGGCCTCTACGGTCCCGAG
GGACCGAGCGAAGAGGTCGCGCGAAAGTTTCTTGAACAGCGGTGAGAATT
TGTTCAACCACGTCTACAAGTAGGAGACCTCGAGTCGTCTATGATGATTC
TTAGTGCTGGTCGGCAGGCTGGCCGGCCGATCCCAACCTGTAGACCCCAT
TACCATAGACACGCTCGCGGTCCTGCGCGAGCACCTGTTTGGTTGACGTT
CTTGGCATTCTCCACCGCAGCGAGGGTCGGAAAGGAGGTGCAATGTGATG
CTTTGTGGGCCCGCTTTTCGGGCAAGGTAGCAATCGAGTCTTTTTGTCCG
GATTGTGTGCTTCGCTAGCCGCGTTGACTCCCCTTCCACCTGTCCTGCTG
GTTATCCTGTATCTTCACAAGCGGGGTAAGCACACACCGTACAACAGAGT
CCAAGATGCTTGGTTGCTCCTAGTGACGTGTTCGGTCCTCACCGCGATGA
TAGCACGTCACTATTTAGCCCGAACGGTGGTGGCTGTCCCGTCCCGCAAA
CAAAGCGCGTCAAAAATCCCCCATGGACCCTGCAGTGCACTTGGTTGTCG
ATGCTACGCTCAAGCGAGGGACAGTACCACTTATCCTGTGATAAGTCAAG
AATAGCTCGCAGAAATCATCATCGAGGTCGTTAGCCAGAGCCAGCCTGTT
CGCCGATGGCGGGCTTCGAGTGCTCCTGCTGGCACGAACAGGCCAAACAG
ACGACGAAGAGTCCAACGATTGTCGATGAGAAAACGTCACTCACTGGTGT
GGCAGTCTGTTGTGCCTGTGAAGGAGGACGTCACAGTTCTACATGAGCGT
GGTTGAGGGTTGTTGACTTAGGTCAAGCCTGGAGTCCAAACCTTTTCGAG
TCAAATATACAGCAGTTCCAATACAGCAATTGAAAGAAGCAAAGGAACGA
GCGATGCAGGCACCAATAAGGGCTGTTCTTGTTTTTTGTTTCAACGAAAG
CAGAGATGTGCCCATAACAGACGGTGTATATCGGTAAATATTGGACGGAG
TAACCAGACGTCAGACGTCAGGCACTGTAGAAACAGCTCGAGGTTGACTT
CGATCAGGCGTGTCGAGGCATCGAAGTAAAGCAAAGCCAGCAGCACGAAA
AGCGGTCCAATCTCAGCCCGCGCAAACAGATCGTGCGAAAAGACGCCGCA
CCGTATGTTTTTGCCAGTCATCTCGGTGCAGAAAAAAAAAAACCCCATGA
ACTATGTGTTGGTGGCTTTTCATCACGAAAGTACAAAAATGAACATAGAG
TCTACATCGGTCTTATCGGATAGACAATTATGAAAGTGCTGTTGTACGCC
GTAGTCGAGTTTTTCTGACATCAGGTCCAACTATCCAGTGACCACGACAT
ACATTTAACAAAACACACCACACGTCCTGGAGAAGGGTCAAACAGCAATT
TTCTGTTCATCTTGCATCACCCCCAGTTGACTTGTTGAGTTCAACCCACT
CTCGTGAGGGGGGCCTTGTAAGCCGTATTTTTATCTCCACTTTCAGCCGT
TTCTTACACTTTGCCGGAGTGCTCCCTTCCGATTCGGCCACGCGTTCCAG
TGTCTCGGTCGGTGTGCCCGTTTGTTTAAGCGAGAAAGTTTGGGTTGTCG
TCACCTCATGGATGCACTAAATTTTCATCGTCGTATGTAGATAAGCTTGC
CTTGCAGGAGGCGATGCCCATTCTTCTTGAAGTGCACCTGGTGTTTCTGT
CTCCCCCCCGCCTAACTACGGTGCGCAGGACAAAGTTGTCCCGCACAGTG
TACTGCTCGCAGTTGAATTTCGGAAGCGTCGTGCTGATCGGCGATGCGGC
TCACGCCATGCAGGCATCTCTGGGCCAAGGCGTGAATTGTGCCCTAGGTG
AGTGAGGGTATGTCCGTGTGCGGCCTGCTGGCTTGCCATACCCCCTCGTC
TAGTTCCATTCGCATGAAAGTCTTTACAGGCCAATTATGCGTCTTCATGG
GTAGATGTTGGGACGGCGCGCGCTTCCATAGACTGGGTGACGCTGTTCGC
CCTATCTTGGGCGGCCTGGAAACACTGTTCTTAATCAGTTCAGATGAGCC
GAAAGGGTCTGACATGCGGGAGTCTGAGCTATTCCTCTTACTTCGAAACA
GGTGTTGTTGGGCTCATATCGGTATGTCGTGCACCACATTCGCCTTTCCA
GGGTGTGTCTACCCGGACGTGTTTTGTGGGGTTTTGGTTCTTGTCGCTGT
GCTCCGAGCGTTTGCGGAGCGGACAAAAACTTGATTGGCAAGTGCAAACC
CCACCCTGCCCAGAGGATTGCCAGGTGCTAGCCAACTTAATGGCTGCCGA
GACAAGAAAGGCCGGGGGGACACAAGTCAATCATATCCCGCAGGTCCTGG
ACGCCTACAACAAGCTCAGGCTGGAGGACGTCCATGCTGTGTGTAAACTG
AGCGAAATCGGCTCAGCCTTGGGCATCAGGAAGACACTTACAGCCCAGTT
GATGCTGACGGTGATGCTGAGCAAGACCCTGGGCCGTCTCGCTCCCAAGG
TAGGCAAGCAGTCTTCCGTTGCTCCATGGCCTTCTTCGCGATGGACGGGT
GCGTTGTACGCTGCACGCGAAAAGGTGCCTGTTTTTCCAACGTGGGGCGA
AAACACGTGCACAAACAAGCGTACACTGGTTCTCCAATCGTTTGCGTGCG
TTTTCTCTTCTCCCGTTGTCACTGTTTGCCGCAGGTCTTTCCACCACCTT
CATTGCTTGCAATCAACGCCAAGAATAGCCGATACGGGGCGGTGATGCGG
GGATTCAAGAGAGAGGCTGCTGTTGCCAAAGGAGTGGGGTTTGCAAGCAT
TGCACTGGTGTTGGTTGGTGTGGCCAGACGAGTAATTCTCAGGATTTGAG
AGGTTTCCATCTCGAGCTCGGGCGAAATATATACGCACAGATCCCTTGCG
CCACGAGCTAGTTGGGGTGCGGACATCGGGAGAGGTGTGGGGCGCAGCCA
AGCGCCTTTCCTTTGCGGAAAGTTGCAGTACGAATTACCCACGTCAGGCT
GCCCTGTTCCCGAAAGTTGAGCAGGGCTCGCGCCTCTCGAGAAGATTACT
TAATAGTTGTCTCGCCACATGTATAAGCTTTCCAGTAGTTCATCGGTGCG
TACCAATAGCTGGCACGTATGCATTGATGTACCTGCAACGGACGTGCTGG
AAGCTACTCTTTCTTGTTGTGTGATCATGTTGATATAAATAGCAAACAAA
GGTCCGAGACAACACGTGCGGAAAGGACACGTTTTCCCTTTCCGGATGGC
AGACCCCTACACCGATCTTGCAGAACACAGTCAAATCGGGAAGTGTCCTG
TACTCGGCACCTCTACCGTTCTTTGCATTTCGGGTGAGAGCCTCGCGCGT
CGTGGGTGAGCTTTCGTACGTGCAGAAAAAAGGTGCTGCTTGACTTCACG
TGTGCAGGAATACAAATTCTCCGTAGACGGCAACCCTTGAAGGAAAGGCG
ACTACAAACTGGACAATAAGATGTTTTCGAGTGTCCACAAGGGTGTGCTG
GGAGAAAAAATATGGACATATAGCCCCC
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig135:12580..18057-

>mRNA_H-canaliculatus_F_contig135.2832.1 ID=mRNA_H-canaliculatus_F_contig135.2832.1|Name=mRNA_H-canaliculatus_F_contig135.2832.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1242bp|location=Sequence derived from alignment at H-canaliculatus_F_contig135:12580..18057- (Hapterophycus canaliculatus Oshoro5f female)
ATGAGCCGAAAGGGTCTGACATGCGGGAGTCTGAGCTATTCCTCTTACTT
CGAAACAGGTGTTGTTGGGCTCATATCGGTATGTCGTGCACCACATTCGC
CTTTCCAGGGTGTGTCTACCCGGACGTGTTTTGTGGGGTTTTGGTTCTTG
TCGCTGTGCTCCGAGCGTTTGCGGAGCGGACAAAAACTTGATTGGCAAGT
GCAAACCCCACCCTGCCCAGAGGATTGCCAGGTGCTAGCCAACTTAATGG
CTGCCGAGACAAGAAAGGCCGGGGGGACACAAGTCAATCATATCCCGCAG
GTCCTGGACGCCTACAACAAGCTCAGGCTGGAGGACGTCCATGCTGTGTG
TAAACTGAGCGAAATCGGCTCAGCCTTGGGCATCAGGAAGACACTTACAG
CCCAGTTGATGCTGACGGTGATGCTGAGCAAGACCCTGGGCCGTCTCGCT
CCCAAGATGAGCCGAAAGGGTCTGACATGCGGGAGTCTGAGCTATTCCTC
TTACTTCGAAACAGGTGTTGTTGGGCTCATATCGGTATGTCGTGCACCAC
ATTCGCCTTTCCAGGGTGTGTCTACCCGGACGTGTTTTGTGGGGTTTTGG
TTCTTGTCGCTGTGCTCCGAGCGTTTGCGGAGCGGACAAAAACTTGATTG
GCAAGTGCAAACCCCACCCTGCCCAGAGGATTGCCAGGTGCTAGCCAACT
TAATGGCTGCCGAGACAAGAAAGGCCGGGGGGACACAAGTCAATCATATC
CCGCAGGTCCTGGACGCCTACAACAAGCTCAGGCTGGAGGACGTCCATGC
TGTGTGTAAACTGAGCGAAATCGGCTCAGCCTTGGGCATCAGGAAGACAC
TTACAGCCCAGTTGATGCTGACGGTGATGCTGAGCAAGACCCTGGGCCGT
CTCGCTCCCAAGGTCTTTCCACCACCTTCATTGCTTGCAATCAACGCCAA
GAATAGCCGATACGGGGCGGTGATGCGGGGATTCAAGAGAGAGGCTGCTG
TTGCCAAAGGAGTGGGGTTTGCAAGCATTGCACTGGTGTTGGTTGGTGTG
GCCAGACGAGTAATTCTCAGGATTTGAGTCTTTCCACCACCTTCATTGCT
TGCAATCAACGCCAAGAATAGCCGATACGGGGCGGTGATGCGGGGATTCA
AGAGAGAGGCTGCTGTTGCCAAAGGAGTGGGGTTTGCAAGCATTGCACTG
GTGTTGGTTGGTGTGGCCAGACGAGTAATTCTCAGGATTTGA
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