prot_H-canaliculatus_F_contig13476.2821.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig13476.2821.1
Unique Nameprot_H-canaliculatus_F_contig13476.2821.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length116
Homology
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BLAST of mRNA_H-canaliculatus_F_contig13476.2821.1 vs. uniprot
Match: D7FUE1_ECTSI (Hydroxymethylglutaryl-CoA reductase (NADPH) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUE1_ECTSI)

HSP 1 Score: 102 bits (255), Expect = 4.100e-23
Identity = 68/138 (49.28%), Postives = 74/138 (53.62%), Query Frame = 0 
Query:    1 MAYFFGFFGISLLDTHTMERTPSSVGLSHLQGAY---------------AKSGGSYGTMCSTETPQVAYSSCSSSNNGINGSKAFHGAPASPP-------PALGPVPEGDEYSSMKDEEVVACVENGKLKDHQLEKKL 116
            MAYFFGFFGIS LDT  MER+PSS GLSHL                   AK   S GTMC  ETPQ+A S                              PALGPVP+G++YS+M DEEV ACV  GKLKDHQLEKKL
Sbjct:  116 MAYFFGFFGISFLDTSAMERSPSSFGLSHLDTHLYASERKRAVQFAEPPAKGSASNGTMCGKETPQLASSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPALGPVPDGEDYSTMTDEEVAACVVTGKLKDHQLEKKL 253
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BLAST of mRNA_H-canaliculatus_F_contig13476.2821.1 vs. uniprot
Match: A0A7S3GVF0_9STRA (3-hydroxy-3-methylglutaryl coenzyme A reductase n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GVF0_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 2.960e-6
Identity = 46/139 (33.09%), Postives = 64/139 (46.04%), Query Frame = 0 
Query:    1 MAYFFGFFGISLLDTHTMERTPSSVGLSHL---------------QGAYAKSGGSYGTMCSTETPQVAYSSCSSSNNGINGSKAFHGAPASPP------PALGPVPEGDE--YSSMKDEEVVACVENGKLKDHQLEKKL 116
            +AYFFGFFGIS +DT  +  +PS+ GL H                Q   AK+   +G++    T     S   +   G N     H A +  P      PA  P    D+  ++ + DEEV+  +  G LKD+QLEKKL
Sbjct:   73 LAYFFGFFGISFVDTKVLSESPSTYGLQHFPQPGESESEEEEPANQETKAKTNAPFGSLYVAPTHNT-LSQNFTPGAGFNAPATSHTARSDGPICSDKRPATTPAVSADDIDFTVLADEEVLGHLITGTLKDYQLEKKL 210
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig13476.2821.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FUE1_ECTSI4.100e-2349.28Hydroxymethylglutaryl-CoA reductase (NADPH) n=1 Ta... [more]
A0A7S3GVF0_9STRA2.960e-633.093-hydroxy-3-methylglutaryl coenzyme A reductase n=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig13476contigH-canaliculatus_F_contig13476:1875..2712 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig13476.2821.1mRNA_H-canaliculatus_F_contig13476.2821.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig13476 1875..2723 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig13476.2821.1 ID=prot_H-canaliculatus_F_contig13476.2821.1|Name=mRNA_H-canaliculatus_F_contig13476.2821.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=116bp
MAYFFGFFGISLLDTHTMERTPSSVGLSHLQGAYAKSGGSYGTMCSTETP
QVAYSSCSSSNNGINGSKAFHGAPASPPPALGPVPEGDEYSSMKDEEVVA
CVENGKLKDHQLEKKL
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