mRNA_H-canaliculatus_F_contig1344.2799.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig1344.2799.1
Unique NamemRNA_H-canaliculatus_F_contig1344.2799.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
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BLAST of mRNA_H-canaliculatus_F_contig1344.2799.1 vs. uniprot
Match: A0A835ZFS4_9STRA (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFS4_9STRA)

HSP 1 Score: 213 bits (543), Expect = 4.480e-65
Identity = 113/214 (52.80%), Postives = 143/214 (66.82%), Query Frame = 1 
Query:    1 MSLPSLDHFNFREYEHFYEPAEDTYLLIDALHGDADFLRDCVKPRLCLEIGPGSGLVTAALCALLTEGKETETSMKLPPPPPQRPLFMAAEINPRAAAACVLTAKANKVE-PFEVVCCDLATCMQDRLRRQVDVLLFNPPYVPTPPEEVGSKDIAAAWAGGERGREVVDRFLPAVKELLSAKGCFYMVVVEDNDPAEIVSVMRSYGVCAEVGST 639
            M+LPSL+HF++++Y+ FYEP++DTYLL+DAL  D  FL D V+P +CLEIGPGSG +T AL  LL E +                L +A +IN  AA        AN V  P EVV  DLA  ++  L  +VDVL+FNPPYVPTPPEEVG++DIAAAWAGG RGREV+DR LP    LLS KG FY+VVV++N P EI+SVM+  G+  +   T
Sbjct:    1 MALPSLEHFSYKDYDTFYEPSDDTYLLLDALDADRRFLADTVQPSVCLEIGPGSGAITTALATLLAEERGFS-------------LMLAVDINASAATXXXXXXAANSVTLPVEVVQGDLANALERGLSGRVDVLVFNPPYVPTPPEEVGTQDIAAAWAGGRRGREVIDRVLPQAAALLSNKGVFYLVVVQENRPQEIMSVMKGLGLSGQTACT 201
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BLAST of mRNA_H-canaliculatus_F_contig1344.2799.1 vs. uniprot
Match: A0A8K0A4Y3_BRALA (N6AMT1 protein n=1 Tax=Branchiostoma lanceolatum TaxID=7740 RepID=A0A8K0A4Y3_BRALA)

HSP 1 Score: 186 bits (472), Expect = 2.260e-54
Identity = 100/202 (49.50%), Postives = 128/202 (63.37%), Query Frame = 1 
Query:   10 PSLDHFNFREYEHFYEPAEDTYLLIDALHGDADFLRDCVKPRLCLEIGPGSGLVTAALCALLTEGKETETSMKLPPPPPQRPLFMAAEINPRAAAACVLTAKANKVEPFEVVCCDLATCMQDRLRRQVDVLLFNPPYVPTPPEEVGSKDIAAAWAGGERGREVVDRFLPAVKELLSAKGCFYMVVVEDNDPAEIVSVMRSYG 615
            P L H    +YEH YEPAEDT+LL+DAL  DADFLR  + P  CLE+G GSG V   L ++L                  RP ++  ++NPRAA    +T K N V   + V  DLA+ +  RL+ +VDV++FNPPYV TP EEVGS+ I A+WAGG +GREV+DRF P V +LLS KG FY+V +E ND  EI S MR++G
Sbjct:   10 PDLSHLTAEDYEHVYEPAEDTFLLMDALEKDADFLRS-IAPSFCLEVGCGSGAVITFLGSILGS----------------RPHYLCTDLNPRAAQCAAMTGKQNNVY-VQPVLTDLASALLPRLQNKVDVMIFNPPYVVTPTEEVGSRGIEASWAGGVKGREVMDRFFPLVPKLLSEKGAFYLVTIEQNDVEEIGSKMRTFG 193
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BLAST of mRNA_H-canaliculatus_F_contig1344.2799.1 vs. uniprot
Match: A0A7S2RT88_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RT88_9STRA)

HSP 1 Score: 182 bits (463), Expect = 5.200e-53
Identity = 102/204 (50.00%), Postives = 130/204 (63.73%), Query Frame = 1 
Query:    7 LPSLDHFNFREYEHFYEPAEDTYLLIDALHGDADFLRDCVKPRLCLEIGPGSGLVTAALCALLTEGKETETSMKLPPPPPQRPLFMAAEINPRAAAACVLTAKANKVEPFEVVCCDLATCMQDRLRRQVDVLLFNPPYVPTPPEEVGSKDIAAAWAGGERGREVVDRFLPAVKELLSAKGCFYMVVVEDNDPAEIVSVMRSYGV 618
            LPSLDH  F +Y H YEPAEDTYL +DAL  D  FL++ ++P + LEIG G+G+V+  L   L                 +R    A ++N RAA     TA  N VE  EVV  DLAT +  RL  +VDVLLFNPPYVPTPPEEVGS+ I A+WAGG  GREV+DRFLP V +LLS KG  Y+V+V++N P ++ S++   G+
Sbjct:    7 LPSLDHVLFTDYHHVYEPAEDTYLFVDALTQDTAFLKE-LEPLVSLEIGAGTGVVSTHLSRALG----------------RRMAHFATDVNTRAAEISKATATENGVESMEVVVGDLATGLHHRLSGKVDVLLFNPPYVPTPPEEVGSQGIEASWAGGIDGREVIDRFLPLVPDLLSDKGQLYLVLVQENRPDDVCSILGKAGL 193
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BLAST of mRNA_H-canaliculatus_F_contig1344.2799.1 vs. uniprot
Match: C3ZRS9_BRAFL (MTS domain-containing protein n=2 Tax=Branchiostoma floridae TaxID=7739 RepID=C3ZRS9_BRAFL)

HSP 1 Score: 178 bits (451), Expect = 2.980e-51
Identity = 95/202 (47.03%), Postives = 121/202 (59.90%), Query Frame = 1 
Query:   10 PSLDHFNFREYEHFYEPAEDTYLLIDALHGDADFLRDCVKPRLCLEIGPGSGLVTAALCALLTEGKETETSMKLPPPPPQRPLFMAAEINPRAAAACVLTAKANKVEPFEVVCCDLATCMQDRLRRQVDVLLFNPPYVPTPPEEVGSKDIAAAWAGGERGREVVDRFLPAVKELLSAKGCFYMVVVEDNDPAEIVSVMRSYG 615
            P L H    +Y+H YEPAEDT+LL+DAL  DAD LR  + P +CLE+G GSG V   L ++L                  RP ++  ++NPRAA     T   N +    V+  DL + +  RL  +VDV++FNPPYV TPPEEVGS  I A+WAGG +GREV+DRF P V  LLS  G FY+V +E NDP EI   MR +G
Sbjct:    8 PDLSHLTAEDYDHVYEPAEDTFLLMDALEKDADLLRS-IAPSICLEVGCGSGAVITFLGSILGS----------------RPHYLCTDLNPRAAECAARTGTQNNISVHPVLT-DLVSALLPRLENKVDVMIFNPPYVVTPPEEVGSHGIEASWAGGVKGREVMDRFFPLVPRLLSDNGVFYLVTIEQNDPEEIGCKMREFG 191
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BLAST of mRNA_H-canaliculatus_F_contig1344.2799.1 vs. uniprot
Match: A0A3Q0SNW2_AMPCI (N-6 adenine-specific DNA methyltransferase 1 n=3 Tax=Cichlidae TaxID=8113 RepID=A0A3Q0SNW2_AMPCI)

HSP 1 Score: 176 bits (447), Expect = 1.150e-50
Identity = 97/206 (47.09%), Postives = 127/206 (61.65%), Query Frame = 1 
Query:   10 PSLDHFNFREYEHFYEPAEDTYLLIDALHGDADFLRDCVKPRLCLEIGPGSGLVTAALCALLTEGKETETSMKLPPPPPQRPLFMAAEINPRAAAACVLTAKANKVEPFEVVCCDLATCMQDRLRRQVDVLLFNPPYVPTPPEEVGSKDIAAAWAGGERGREVVDRFLPAVKELLSAKGCFYMVVVEDNDPAEIVSVMRSYGVCAE 627
            P   H    ++   YEPAED++LLIDAL  DAD L+  + P +CLE+G GSG+V+A L ++L                    L++  ++NP AA     TA  N V P + V  DLA C+  +L  +VD+LLFNPPYV TP EEVGS  I AAWAGGERGREV DRFLPAV  LLS+KG FY++ + +NDP EI+ ++   G+  E
Sbjct:    8 PVYSHAGRGDFREVYEPAEDSFLLIDALEKDADRLQR-ISPCVCLEVGSGSGVVSAFLASVLGPSA----------------LYICTDVNPAAAQCTAKTASCNSV-PLQPVITDLAECLLPQLCGKVDILLFNPPYVVTPSEEVGSTGIEAAWAGGERGREVTDRFLPAVARLLSSKGLFYLITIAENDPEEIIRLLGQSGLTGE 195
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1344.2799.1 vs. uniprot
Match: A0A3M6U281_POCDA (MTS domain-containing protein n=1 Tax=Pocillopora damicornis TaxID=46731 RepID=A0A3M6U281_POCDA)

HSP 1 Score: 173 bits (439), Expect = 1.980e-49
Identity = 97/207 (46.86%), Postives = 127/207 (61.35%), Query Frame = 1 
Query:   10 PSLDHFNFREYEHFYEPAEDTYLLIDALHGDADFLRDCVKPRLCLEIGPGSGLVTAALCALLTEGKETETSMKLPPPPPQRPLFMAAEINPRAAAACVLTAKANKVEPFEVVCCDLATCMQDRLRRQVDVLLFNPPYVPTPPEEVGSKDIAAAWAGGERGREVVDRFLPAVKELLSAKGCFYMVVVEDNDPAEIVSVMRSYGVCAEV 630
            PS  H N  +Y+H YEPAEDT+L++DAL  DADFLR   +P LC+E+G GSG +   L +++  G  T               ++A +INP AA      AK N V+   VV  DL   +   +  +VDVL+FNPPYV T  +EVGS  I A+WAGG+RGREV+DR  P V  LLS  GCFY+V V +N P E++S+M S G+C EV
Sbjct:    6 PSFSHLNQEDYQHVYEPAEDTFLMMDALEKDADFLR-AQRPLLCVEVGSGSGALITFLASII--GSLTH--------------YVATDINPMAAQCTSQMAKQNGVKVSCVVT-DLVEGLIPNIFGKVDVLIFNPPYVVTASDEVGSHSIEASWAGGDRGREVMDRLFPFVSTLLSNTGCFYLVTVAENKPDEVISIMESQGLCGEV 194
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1344.2799.1 vs. uniprot
Match: A0A167P268_PHYB8 (MTS domain-containing protein n=1 Tax=Phycomyces blakesleeanus (strain ATCC 8743b / DSM 1359 / FGSC 10004 / NBRC 33097 / NRRL 1555) TaxID=763407 RepID=A0A167P268_PHYB8)

HSP 1 Score: 172 bits (437), Expect = 3.390e-49
Identity = 96/207 (46.38%), Postives = 126/207 (60.87%), Query Frame = 1 
Query:   10 PSLDHFNFREYEHFYEPAEDTYLLIDALHGDADFLRDCVKPRLCLEIGPGSGLVTAALCALLTEGKETETSMKLPPPPPQRPLFMAAEINPRAAAACVLTAKANKVEPFEVVCCDLATCMQDRLRRQVDVLLFNPPYVPTPPEEVGSKDIAAAWAGGERGREVVDRFLPAVKELLSAKGCFYMVVVEDNDPAEIVSVMRSYGVCAEV 630
            P L H   ++++  YEPAEDT+LL+DAL  DA +L+     RLCLEIG GSG VTA L  ++  GK             Q  +++  +INP A  A   TAK N V   E +   L   +  RL   VDVLLFNPPY  TPPEEVGS  I AAWAGG  GR+V+D  LP V++LLS  G FY++++ +N P E+V +M+SY + AE+
Sbjct:    5 PDLSHLTTKDFDRLYEPAEDTFLLLDALEEDATWLQSN-NSRLCLEIGSGSGCVTAMLAKII--GK-------------QNAVYLTTDINPYACKATQQTAKHNGVSLVETLQTSLVGSLLPRLTHSVDVLLFNPPYAVTPPEEVGSNGIEAAWAGGIDGRQVIDALLPFVEKLLSPNGVFYLLLINENHPLEVVDIMKSYHMRAEI 195
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BLAST of mRNA_H-canaliculatus_F_contig1344.2799.1 vs. uniprot
Match: A0A6P5AAF5_BRABE (hemK methyltransferase family member 2-like n=1 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P5AAF5_BRABE)

HSP 1 Score: 172 bits (437), Expect = 3.940e-49
Identity = 95/202 (47.03%), Postives = 123/202 (60.89%), Query Frame = 1 
Query:   10 PSLDHFNFREYEHFYEPAEDTYLLIDALHGDADFLRDCVKPRLCLEIGPGSGLVTAALCALLTEGKETETSMKLPPPPPQRPLFMAAEINPRAAAACVLTAKANKVEPFEVVCCDLATCMQDRLRRQVDVLLFNPPYVPTPPEEVGSKDIAAAWAGGERGREVVDRFLPAVKELLSAKGCFYMVVVEDNDPAEIVSVMRSYG 615
            P L H    +YEH YEPAEDT+LL+DAL  DA FLR  + P +CLE+G GSG V   L ++L                  R L++  ++NPRAA     T K N V P + V  DLA+ +  RL+ +VDV++FNPPYV T  EEVGS  I A+WAGG +GREV+DRF P V +LLS +G FY+V +E N   EI   M ++G
Sbjct:   10 PDLSHLTAEDYEHVYEPAEDTFLLMDALEKDAGFLRS-ITPSICLEVGCGSGAVITFLGSILGS----------------RSLYLCTDLNPRAADCAARTGKQNNV-PVQPVLTDLASALLPRLQNKVDVMIFNPPYVVTSSEEVGSHGIEASWAGGVKGREVMDRFFPLVPKLLSDRGVFYLVTIEQNKAEEIGHEMSTFG 193
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1344.2799.1 vs. uniprot
Match: UPI001CE0BFD2 (methyltransferase N6AMT1 isoform X3 n=3 Tax=Eupercaria TaxID=1489922 RepID=UPI001CE0BFD2)

HSP 1 Score: 173 bits (439), Expect = 6.970e-49
Identity = 96/209 (45.93%), Postives = 127/209 (60.77%), Query Frame = 1 
Query:    1 MSLPSLDHFNFREYEHFYEPAEDTYLLIDALHGDADFLRDCVKPRLCLEIGPGSGLVTAALCALLTEGKETETSMKLPPPPPQRPLFMAAEINPRAAAACVLTAKANKVEPFEVVCCDLATCMQDRLRRQVDVLLFNPPYVPTPPEEVGSKDIAAAWAGGERGREVVDRFLPAVKELLSAKGCFYMVVVEDNDPAEIVSVMRSYGVCAE 627
            MS P   H    ++   YEPAED++LLIDAL  DA+ L+  + P +CLE+G GSG+V+A L +++                    L++  ++NP AA     TA  N V   + V   L  C+  RL  +VDVLLFNPPYV TP EEVGS  IAAAWAGGERGREV DRFLP V +LLS+KG FY++ + +NDP EI+ ++   G+  E
Sbjct:   52 MSTPVYSHAGRGDFRDVYEPAEDSFLLIDALEKDAERLQ-LMSPCVCLEVGSGSGVVSAFLASVVGPSA----------------LYLCTDVNPAAAQCTAKTASCNNVS-LQPVITSLVECLLPRLSGKVDVLLFNPPYVVTPSEEVGSTGIAAAWAGGERGREVTDRFLPVVAQLLSSKGLFYLITIAENDPGEIIRLLDKGGLRGE 242
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1344.2799.1 vs. uniprot
Match: UPI001CE0F64F (methyltransferase N6AMT1 isoform X1 n=2 Tax=Siniperca chuatsi TaxID=119488 RepID=UPI001CE0F64F)

HSP 1 Score: 173 bits (439), Expect = 9.240e-49
Identity = 96/209 (45.93%), Postives = 127/209 (60.77%), Query Frame = 1 
Query:    1 MSLPSLDHFNFREYEHFYEPAEDTYLLIDALHGDADFLRDCVKPRLCLEIGPGSGLVTAALCALLTEGKETETSMKLPPPPPQRPLFMAAEINPRAAAACVLTAKANKVEPFEVVCCDLATCMQDRLRRQVDVLLFNPPYVPTPPEEVGSKDIAAAWAGGERGREVVDRFLPAVKELLSAKGCFYMVVVEDNDPAEIVSVMRSYGVCAE 627
            MS P   H    ++   YEPAED++LLIDAL  DA+ L+  + P +CLE+G GSG+V+A L +++                    L++  ++NP AA     TA  N V   + V   L  C+  RL  +VDVLLFNPPYV TP EEVGS  IAAAWAGGERGREV DRFLP V +LLS+KG FY++ + +NDP EI+ ++   G+  E
Sbjct:   62 MSTPVYSHAGRGDFRDVYEPAEDSFLLIDALEKDAERLQ-LMSPCVCLEVGSGSGVVSAFLASVVGPSA----------------LYLCTDVNPAAAQCTAKTASCNNVS-LQPVITSLVECLLPRLSGKVDVLLFNPPYVVTPSEEVGSTGIAAAWAGGERGREVTDRFLPVVAQLLSSKGLFYLITIAENDPGEIIRLLDKGGLRGE 252
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1344.2799.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZFS4_9STRA4.480e-6552.80S-adenosyl-L-methionine-dependent methyltransferas... [more]
A0A8K0A4Y3_BRALA2.260e-5449.50N6AMT1 protein n=1 Tax=Branchiostoma lanceolatum T... [more]
A0A7S2RT88_9STRA5.200e-5350.00Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
C3ZRS9_BRAFL2.980e-5147.03MTS domain-containing protein n=2 Tax=Branchiostom... [more]
A0A3Q0SNW2_AMPCI1.150e-5047.09N-6 adenine-specific DNA methyltransferase 1 n=3 T... [more]
A0A3M6U281_POCDA1.980e-4946.86MTS domain-containing protein n=1 Tax=Pocillopora ... [more]
A0A167P268_PHYB83.390e-4946.38MTS domain-containing protein n=1 Tax=Phycomyces b... [more]
A0A6P5AAF5_BRABE3.940e-4947.03hemK methyltransferase family member 2-like n=1 Ta... [more]
UPI001CE0BFD26.970e-4945.93methyltransferase N6AMT1 isoform X3 n=3 Tax=Euperc... [more]
UPI001CE0F64F9.240e-4945.93methyltransferase N6AMT1 isoform X1 n=2 Tax=Sinipe... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1344contigH-canaliculatus_F_contig1344:17470..23126 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score181.4
Seed ortholog evalue5.2e-43
Seed eggNOG ortholog7739.XP_002588718.1
Preferred nameN6AMT1
KEGG koko:K19589
GOsGO:0001558,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0016740,GO:0016741,GO:0019538,GO:0030307,GO:0032259,GO:0032991,GO:0036211,GO:0040008,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0045927,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051128,GO:0065007,GO:0071704,GO:0140096,GO:1901564
EggNOG free text desc.Methyltransferase small domain
EggNOG OGs39XP3@33154,3BIZ2@33208,3CZB8@33213,486TK@7711,COG2890@1,KOG3191@2759
EC2.1.1.297
COG Functional cat.J
Best tax levelChordata
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03012
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionexpressed unknown protein
Ec32 orthologEc-07_000990.1
Exons5
Model size981
Cds size753
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1344.2799.1prot_H-canaliculatus_F_contig1344.2799.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig1344 17470..22898 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929084.3332915-CDS-H-canaliculatus_F_contig1344:17469..176211622929084.3332915-CDS-H-canaliculatus_F_contig1344:17469..17621Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1344 17470..17621 +
1696845673.3630288-CDS-H-canaliculatus_F_contig1344:17469..176211696845673.3630288-CDS-H-canaliculatus_F_contig1344:17469..17621Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1344 17470..17621 +
1622929084.3465092-CDS-H-canaliculatus_F_contig1344:20915..210871622929084.3465092-CDS-H-canaliculatus_F_contig1344:20915..21087Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1344 20916..21087 +
1696845673.3740993-CDS-H-canaliculatus_F_contig1344:20915..210871696845673.3740993-CDS-H-canaliculatus_F_contig1344:20915..21087Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1344 20916..21087 +
1622929084.3566062-CDS-H-canaliculatus_F_contig1344:21779..219071622929084.3566062-CDS-H-canaliculatus_F_contig1344:21779..21907Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1344 21780..21907 +
1696845673.3834465-CDS-H-canaliculatus_F_contig1344:21779..219071696845673.3834465-CDS-H-canaliculatus_F_contig1344:21779..21907Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1344 21780..21907 +
1622929084.3665366-CDS-H-canaliculatus_F_contig1344:22390..224631622929084.3665366-CDS-H-canaliculatus_F_contig1344:22390..22463Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1344 22391..22463 +
1696845673.4012928-CDS-H-canaliculatus_F_contig1344:22390..224631696845673.4012928-CDS-H-canaliculatus_F_contig1344:22390..22463Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1344 22391..22463 +
1622929084.3823984-CDS-H-canaliculatus_F_contig1344:22670..228981622929084.3823984-CDS-H-canaliculatus_F_contig1344:22670..22898Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1344 22671..22898 +
1696845673.4132454-CDS-H-canaliculatus_F_contig1344:22670..228981696845673.4132454-CDS-H-canaliculatus_F_contig1344:22670..22898Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1344 22671..22898 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929084.3930209-UTR-H-canaliculatus_F_contig1344:22898..231261622929084.3930209-UTR-H-canaliculatus_F_contig1344:22898..23126Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1344 22899..23126 +
1696845673.424548-UTR-H-canaliculatus_F_contig1344:22898..231261696845673.424548-UTR-H-canaliculatus_F_contig1344:22898..23126Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1344 22899..23126 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig1344.2799.1

>prot_H-canaliculatus_F_contig1344.2799.1 ID=prot_H-canaliculatus_F_contig1344.2799.1|Name=mRNA_H-canaliculatus_F_contig1344.2799.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=251bp
MSLPSLDHFNFREYEHFYEPAEDTYLLIDALHGDADFLRDCVKPRLCLEI
GPGSGLVTAALCALLTEGKETETSMKLPPPPPQRPLFMAAEINPRAAAAC
VLTAKANKVEPFEVVCCDLATCMQDRLRRQVDVLLFNPPYVPTPPEEVGS
KDIAAAWAGGERGREVVDRFLPAVKELLSAKGCFYMVVVEDNDPAEIVSV
MRSYGVCAEVGSTSVQNSRMIRVSNSGGSSSCLLRWAGVSLRAPSWPPFS
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mRNA from alignment at H-canaliculatus_F_contig1344:17470..23126+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig1344.2799.1 ID=mRNA_H-canaliculatus_F_contig1344.2799.1|Name=mRNA_H-canaliculatus_F_contig1344.2799.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=5657bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1344:17470..23126+ (Hapterophycus canaliculatus Oshoro5f female)
ATGTCCCTGCCAAGCCTGGACCATTTCAATTTCCGAGAATATGAGCACTT
CTACGAACCAGCAGAGGACACGTACCTTTTGATCGATGCTTTACACGGAG
ATGCGGACTTTCTACGAGACTGTGTCAAACCAAGGCTGTGCTTGGAGATA
GGGTGAGCATCAGTTGTTGTTGATTCACGGTGTTGAGCTGTAGTCCTCCT
GTCTCCGTCTCTCAGTGCCAGAAAGCTACGACGTTGAATCGCACAAGTGC
TGCTTCCATCGTTTCCAGGCAAGAGAGAAAATTGCTAACCTATTTGCGGC
GCAACCTCATCGAACATGCACTTCGAGGCATTGGGCCCTAATGCGCGAGA
CCTTACCACCGGCACTTTCCAGAGGCACCGACACTGTTGCGAATAGTTCC
AAAACCGGTATATTATTGAGGGCTACCAAACCCTCAATAGTGCCGCACTG
TTGAGGTACTATTGAGGTAGTGGGGAAGTAATAAGGGTTAAGCATTGCGA
GTACGGTAGGATTGTGAGGTAGTTCACCCTGTTGAGTGACACGAACCGGA
CCCCAACAAGAAATACTTAACGGCAATCGAACACTTGGTTGTGGTCCATC
AGTGACATTGTATGTCAGACCGGAAAGTGCTTGTATCGTCGCGTGTTACT
AATTGTGTCTGCCGCATTCAACACACCAAAATTGACGCGGGTGTTGTTGC
CTTTATTCATGTCGCTCTTCATTTCCCTTACACAAAACAGAAACAACGAT
GGATACTCATGCAGCCTACCAGGTACACACAAGTGTACCCGAACGGCGAA
AGTTGAGCTGAAGCACCAACAGAAGAGCACCGAGTGACCCAAAAAGAAAA
ACGACACACCCATGCCCACACTGCTGCCCCCTTCAACCTACGGCAAGCAA
CAGCTGAAAAAACCTTGATGAAAGCCAAAGACAGCTACATATGCAAGCTA
TGACGTGTGTAAAACCGAGAAGATTGTCTTACAGTAGTTACTCGCTCCTC
CACCAGCTTCAGAATTGCGAGTTTCGGGTATAGAGCAAGTAGTCGCTTGC
GAGGGCCACTTTCCCCTTTTGTTCATTTTTCCCCCTCCCTTGGTTTGGGC
GTTTTGCTTGTCCACCTCCAACGCCCTCCTCGATAGCCCCTTTCCGCTTG
TGAGATGTGAGAGGCGTCTACGCATGTGGTGCAGATGCGATGAAGCTCGT
TGTCCCCTGCCACGGAACCGCACGTGCCATGAAGTCGCCCGCCGCATCCT
CCCTGGCATACGTGGTCGTCGGGGGCCACTGGCTGGCTACCGGTCTGGCG
GCAAGCACAGTTCACCCGCAGCACACGGCGTGCTGTGCCTCTGCGTCGCG
TGCTGTAGGGATACAGCAGTCTGTTTCTCTAGATATCATTACTATTTCGC
TTGCCCTCCGTTTCTGTAAATATTGTGGCGTGGTCTGATGTGTAAAAAAA
GGGGGCGGTAGAGTAGGGGAACGTGTGTGTGCCGAAGCGGCGCCATTGAG
GCTTGCGGCGGTGTAAAACCGGTACTATTGACAGCAGCTCCCAGTAGTGC
CGGTACCAGCACTACTGCGGGCTCTGTCCGTCCAGAGAAATTTTGCCGGC
ACTACACCGGGCATTGGCACTATTCAACCGGCACTTCTGAGGGCCCAATC
CTGTACTTCAAATATAGAAGTAAGACCGGTTTCAATGGTCGCAAAAAGTA
GGGGTCAAAAGTTTCTCTTGGCCAACATTTGTTCAAAAACATTTGGACGG
CCATATTATAGGAGCAAATGTTGTCATATATCTTGGCGAACTTTTTGCAT
TTGACAGAAAAGTTCATTTTCGAACAATTCTTGAGGCGGCGGGAATTCTG
AAGCGCCGCTCTTGATTACAGTCAATAGAGCCAACCATCGGGCATCTCTT
ACCGCTTTTTTTGTCGGCGTCGTGAAGCGGGAGCTCATGTCAGCGAGGGC
GCAAAAGGGCACGAGGTTACACAGCAGTCTTTGGTGCCGAGAGACACCCA
CGCGCTTTTTGCACTTCCGACCGAAGAACAAAGGCCACGAGCTTCGAGCT
TCGAAGGGTGAATAAGAGGTGCATGCCCCAGCAAGCAAGCAATTGAGTAT
GCCCTGCCATCTTTTTGGTTTCAAGTCAACAGCGATAGGACCGGCAGTGG
ATTTGTTTGATGCTTGACGCGCCAGAACGAGACGGTTCGCCTTGTCCTCG
ACCCCCGCCGGAACGTTTGTTCGATCTCCTCGCTAGTTCCTCCCACACGT
CACTGCGAAGGCTTCAAGACGGCAACTCTGGGGTTGGTCGGAGTCCATGA
CGTGCTTCCTATATCCTAGTTTCGTAAACATCAAGAGATTTGCTGAGTGG
GAAACACACGTTGAAGGGCCACGACACTGGGATAGTCCACATTTTGATTA
TCCTCTCGCAAGATAAGATTGTGTTTCCCATAAGACGTACGACCAAACGT
TCGAGAGACGAAAAGTTTTCAGCCAAATCCTCGTAGCCAATACAACTTTT
TGACAAAAAATTGTGTCGCGATTAAAACCGGTCTAATACTTCGAAGTACG
AAGGTTCGGAGTCATATAAGGTGCGAGATGCCGCAAGTAAAGTTCGATCT
GGACCTGATACAAGTATCATATCGTACATGACACCACTGATTACTGGTTA
TGGGACGAACCTTTATCTTAATCTTGCCTTCCCCTCTCGTATCTCAGATC
TCAGACCAAGATCAAGATTGCGATGGCCCCGCGCTATGCGAATTTATTCT
TATCGTTGATATCGGAGCAATGAGGTATCTGTCGACAAAATTACCAATAC
TCAACGGAGCGGGCTCCCAGAGGACATACAGTAACCCTCTAGGCGCTGTG
AGGATACTTCAGCGGCAAGTGGTTGGCCGGCGATTTGCGGTGGACGTAAA
AAGATATGTAGTCTCTATTACCTGAAGGGAAAAATCAGCCCGTGCGCTCA
GATAGAAACAACGCCCGTTGTATCGACACAGTAGTGGGGCATGATCGTGA
ATCTCTCGAGCTTTGTTTCGCCATATGCGCCCTGTCCATGACTGATTTCC
TTCGTTCGGAAACCACCTTCTATCCAAAACCAAGAGACGAAGACCAATGT
CAATGCGCCACAACCAGTCGCCTTAATTTCCTTCTTTATTTGTTTAAACG
TTATTTCAACGAACTTGAATCTGACGATGGCACACAAACTCACCTGAAGA
AAAAACAACCATCGATTGGCTCGAATTTTAGGAGATGGGACAACAGTTTC
TACCACTGTAGTTGGAACGGTTGCTGCTGGAATACCGTGTCGTCCTGAAC
CTGGGCCACTTCGGCGACTTGCTGATCACAGAAGCACCCCTCCACCGCAT
ACGCAGCTCACTTGCGGAAGCGTTTCGTGTGATGGCACACTTGTTGTACC
CTCTCTTTCCTGTTCGAAACACCCATGTCATGCCGCAACAACACAGACCA
GGCAGCGGCCTCGTGACTGCGGCTCTCTGTGCGTTGCTGACGGAAGGGAA
GGAAACGGAGACATCGATGAAGCTGCCGCCACCGCCACCCCAGCGACCTC
TCTTCATGGCCGCAGAGATTAACCCACGGGCCGCGGCGGCTTGTGTGCTC
ACCGCGAAGGCCAACAAGGTGCTCTCTAGGTTATTCGCCAACCGGGTGGA
CACCTTGTGTGTCGCTCCCTTTGATGCTGGGCAAGTCGCAGGAGCTGGGG
ACGGAGTAGAACCGCTCCCCCTCTGACAACAAATGAATGCCAAACTCGGC
TCAAAAATGGGAAGCAGCGATAGCGCATGTCTGAGGGATTAAGTTAGCAC
TGTGCTGGTGTCTTTTTTCCTCCGTCCCTTGAAGACCTTGTGTCCGGCTC
TCGCCCATGCGCAACACTGCTGTGGGCGGTCAATTGAAAGGGACATGCGA
GCCGACCTGTCCTACTGTATGAGTACATGTGCGCGACGGGTTTCGATAAG
GCAAGCTCAGAGGCATGTTTGTACCCACCACGTGAGCCAGATTAGTGGGA
GCGAAGTTCAAGGGCCGTAAAGGCCGGACGGGTGCGACACCCACAACCGC
CGCAGTGCAAACTGGTGGAGACACGACTGCCGCACGCGCGTGTACCGCGT
TGAACCAACGCTTGCGCTCATGGGCTCGACTATCCGGAGTACCTTTGCAG
GAGGTGTGACGATGTTTATGTGCCACCAGCCACACTGGTTCCCCAGTGGA
GATGCCTTTCGGCTGCCCCGCCAGAAGATAGCGAAAACAACACCCTCAGG
CCAAGTTTGTAGCATATTTTAGCATCCTGAAGTCCTAGCGCGTGTTCATC
AACTCGACAGGTCGAGCCCTTCGAGGTTGTGTGCTGCGACCTGGCCACCT
GTATGCAGGATCGCTTGAGACGACAGGTGGACGTCCTCCTGTTCAACCCT
CCGTACGTGCCGACCCCTCCGGAAGAGGTCGGTTCCAAGTGAGGGAACCC
TGGGTCCCCAAAGTGCGCGTCGGAAAGCGTAGCTCTTTGCTTGTCCAGTG
AAGGAAAGGAAATATGGCTGGATCCAATAAAACCTTTGCGAAGATTTCGT
AAGTTGTGCTTATTTCTCTTCTAGAATTACTTTTTGGCAGGAGGCCTTCC
GTTACTAGGCTGGTTGGCGTCCTTGGTCATGGCAAGGGTTACCGCCCTTA
TACCGCGTTGTAGAAGCAGGAAGCTGGTGCGCGCTCTCCCGGCTGCGCCT
CGGCCACGCCCGCGTCTCGCCGCTTCTTCGAGTTCTTTGACCCAGACAAA
AGAGCAACAGGTTGGGGAGAAAGATCGAACGTCAGACGAGGGTCGCTCCA
ACACTGTCTTGTCTGACCAATCCTCCACTCTGCTGATTCCTCTTCGCTTC
TCCACGGCGGCTGGCCACCGCGGTTGTCACCTGATGGGGCTCGGCGACTC
GTGATTTGGCGTGGGTGACAGAGACATCGCGGCTGCCTGGGCAGGGGGAG
AAAGGGGACGAGAAGTGGTTGACCGATTTCTCCCGGCCGTGAAGGTGCGA
TGGTGGGCTAGACCTTTCCTGTCTCGTCGTGATGTATCGCAACCCACGGC
AGCGACGCACCTCGTTCATGTGAGGGTCGACTGCCGACTGGTTCACACCA
TGCGGTGGGGGGGCTTAATTTTGATCTGACGTGAAGATGCCCGTCTGAGG
TTGTGAGCACGATGACAATAAATCCTCGGACGAATCGCCCGCACATCTCA
GGAGCTCCTGAGCGCGAAAGGATGCTTCTACATGGTGGTTGTGGAAGACA
ACGATCCAGCAGAGATCGTGTCGGTGATGAGGAGCTACGGCGTTTGCGCG
GAGGTGGGCAGCACGAGTGTCCAGAATTCCAGAATGATACGGGTTTCGAA
TAGCGGTGGTTCCTCCAGCTGTTTGCTCAGATGGGCGGGCGTTTCATTGC
GGGCACCCTCTTGGCCGCCCTTCTCTTGAAGTGCGTCCTTGAAGTGCGTC
CAAGAACCTATACTTGTAGTCCCACCCGAACATCCCGTTTCTTCTTTCCT
TGCTTTTCTTCAAGGGCCACCTCCGAAAGACTTCCGCCAATCACAGTCGA
AAGCCTCTACGCGGTCGGGATCTCGAACAGTTGATAGAGGGAGCCTACGC
TCACATGCACGTCACGGTTGTGTTGGGAGCCAAACTCTCGCCACAAATCG
ACCGCAA
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1344:17470..23126+

>mRNA_H-canaliculatus_F_contig1344.2799.1 ID=mRNA_H-canaliculatus_F_contig1344.2799.1|Name=mRNA_H-canaliculatus_F_contig1344.2799.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1506bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1344:17470..23126+ (Hapterophycus canaliculatus Oshoro5f female)
ATGTCCCTGCCAAGCCTGGACCATTTCAATTTCCGAGAATATGAGCACTT
CTACGAACCAGCAGAGGACACGTACCTTTTGATCGATGCTTTACACGGAG
ATGCGGACTTTCTACGAGACTGTGTCAAACCAAGGCTGTGCTTGGAGATA
GGATGTCCCTGCCAAGCCTGGACCATTTCAATTTCCGAGAATATGAGCAC
TTCTACGAACCAGCAGAGGACACGTACCTTTTGATCGATGCTTTACACGG
AGATGCGGACTTTCTACGAGACTGTGTCAAACCAAGGCTGTGCTTGGAGA
TAGGACCAGGCAGCGGCCTCGTGACTGCGGCTCTCTGTGCGTTGCTGACG
GAAGGGAAGGAAACGGAGACATCGATGAAGCTGCCGCCACCGCCACCCCA
GCGACCTCTCTTCATGGCCGCAGAGATTAACCCACGGGCCGCGGCGGCTT
GTGTGCTCACCGCGAAGGCCAACAAGACCAGGCAGCGGCCTCGTGACTGC
GGCTCTCTGTGCGTTGCTGACGGAAGGGAAGGAAACGGAGACATCGATGA
AGCTGCCGCCACCGCCACCCCAGCGACCTCTCTTCATGGCCGCAGAGATT
AACCCACGGGCCGCGGCGGCTTGTGTGCTCACCGCGAAGGCCAACAAGGT
CGAGCCCTTCGAGGTTGTGTGCTGCGACCTGGCCACCTGTATGCAGGATC
GCTTGAGACGACAGGTGGACGTCCTCCTGTTCAACCCTCCGTACGTGCCG
ACCCCTCCGGAAGAGGTCGGTTCCAAGTCGAGCCCTTCGAGGTTGTGTGC
TGCGACCTGGCCACCTGTATGCAGGATCGCTTGAGACGACAGGTGGACGT
CCTCCTGTTCAACCCTCCGTACGTGCCGACCCCTCCGGAAGAGGTCGGTT
CCAAAGACATCGCGGCTGCCTGGGCAGGGGGAGAAAGGGGACGAGAAGTG
GTTGACCGATTTCTCCCGGCCGTGAAGAGACATCGCGGCTGCCTGGGCAG
GGGGAGAAAGGGGACGAGAAGTGGTTGACCGATTTCTCCCGGCCGTGAAG
GAGCTCCTGAGCGCGAAAGGATGCTTCTACATGGTGGTTGTGGAAGACAA
CGATCCAGCAGAGATCGTGTCGGTGATGAGGAGCTACGGCGTTTGCGCGG
AGGTGGGCAGCACGAGTGTCCAGAATTCCAGAATGATACGGGTTTCGAAT
AGCGGTGGTTCCTCCAGCTGTTTGCTCAGATGGGCGGGCGTTTCATTGCG
GGCACCCTCTTGGCCGCCCTTCTCTTGAGAGCTCCTGAGCGCGAAAGGAT
GCTTCTACATGGTGGTTGTGGAAGACAACGATCCAGCAGAGATCGTGTCG
GTGATGAGGAGCTACGGCGTTTGCGCGGAGGTGGGCAGCACGAGTGTCCA
GAATTCCAGAATGATACGGGTTTCGAATAGCGGTGGTTCCTCCAGCTGTT
TGCTCAGATGGGCGGGCGTTTCATTGCGGGCACCCTCTTGGCCGCCCTTC
TCTTGA
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