mRNA_H-canaliculatus_F_contig1341.2780.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig1341.2780.1
Unique NamemRNA_H-canaliculatus_F_contig1341.2780.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
BLAST of mRNA_H-canaliculatus_F_contig1341.2780.1 vs. uniprot
Match: D8LS86_ECTSI (PARP catalytic domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LS86_ECTSI)

HSP 1 Score: 616 bits (1588), Expect = 1.170e-209
Identity = 298/417 (71.46%), Postives = 335/417 (80.34%), Query Frame = 1
Query:   13 RCQLNGCSFTVHVDEDTGRVHNFCGRRHADEALANGGWQSPSRSARAAEAAATAAAAVKGAAQCKMEGCSVSVFRDPVTGEESDYCSNRHYVMGKALLNRECXXXXXXXXXXXXXXXXXXXXXXXSRCAGQVGMPHLMGSSECSLPGCVNVNMVHPRSREEMGYCCEDHRLRATQRSLGPNPEPFIDRTFRGGTTSADDFRLSVLTNRHPEYLSRKEQFIQKWEKPVSGGGVSILRIFKIKVPEDVRRKTADHMEQVGNVQRRFHGTSCSDVCTFFVDLRGGPCGESTCKVCNICTHGFMLRENVGDTARRSLFDLRYGAGLYFSSVSGKANDYAFESEKTDRSGRKVRCMFLANVAVGRAFITFEGKLDPNANLCPPPGFDSVIGERGSELNYPEVVVYREEAAVPTHLIVYALQE 1263
            RC+L GCS TV+VDE +GRVH FCGR HA+EA+ANG   SPSR   A + A    A  KG  +C +EGC   V+RDPVT  +S YCSNRHYV G A+LN EC                       SRCAG+VGM +L+G   CSLPGCVN N VHPR R+E GYCCEDHRLRATQRSLGPNPEPF+DRTFRGGTTSADDF+LSVLTNRHPEYLSRK+QF+QKWEKP+ G GVS+LRIFK++VP+D+RR+T   M QVGNVQRRFHGTSCS+VCTFFVDLRGGPCGESTCKVCNICTHGF LR+NVGDTARR+ FDLRYG GLYFSSVSGKANDYA  SEKTDRSG+KVRCMFL++V VGRAFIT+EGKL P    CPPPGFDSV+GE+G  LNYPEVVVY+EEAA+PTHLIVYAL E
Sbjct:   65 RCKLAGCSRTVYVDERSGRVHEFCGRGHANEAMANGKRSSPSRGTGAGKGA---PAHEKGTGECSLEGCKELVYRDPVTKVDSKYCSNRHYVAGTAMLNSECIRDGCSRAAWVDEGTGGVLDYCGSRCAGEVGMNYLVGVGVCSLPGCVNPNFVHPRDRQETGYCCEDHRLRATQRSLGPNPEPFVDRTFRGGTTSADDFQLSVLTNRHPEYLSRKQQFMQKWEKPLVGTGVSVLRIFKVQVPKDIRRRTETCMGQVGNVQRRFHGTSCSNVCTFFVDLRGGPCGESTCKVCNICTHGFQLRDNVGDTARRTNFDLRYGDGLYFSSVSGKANDYAELSEKTDRSGKKVRCMFLSSVTVGRAFITYEGKLPPEQ--CPPPGFDSVVGEKGPALNYPEVVVYKEEAALPTHLIVYALHE 476          
BLAST of mRNA_H-canaliculatus_F_contig1341.2780.1 vs. uniprot
Match: D8LS87_ECTSI (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS87_ECTSI)

HSP 1 Score: 379 bits (972), Expect = 4.200e-118
Identity = 200/413 (48.43%), Postives = 247/413 (59.81%), Query Frame = 1
Query:   16 CQLNGCSFTVHVDEDTGRVHNFCGRRHADEALANGGWQSPSRSARAAEAAATAAAAVKGAAQCKMEGCSVSVFRDPVTGEESDYCSNRHYVMGKALLNRECXXXXXXXXXXXXXXXXXXXXXXXSRCAGQVGMPHLMGSSECSLPGCVNVNMVHPRSREEMGYCCEDHRLRATQRSLGPNPEPFIDRTFRGGTTSADDFRLSVLTNRHPEYLSRKEQFIQKWEKPVSGGGVSILRIFKIKVPEDVRRKTADHMEQVGNVQRRFHGTSCSDVCTFFVDLRGGPCGESTCKVCNICTHGFMLRENVGDTARRSLFDLRYGAGLYFSSVSGKANDYAFESEKTDRSGRKVRCMFLANVAVGRAFITFEGKLDPNANLCPPPGFDSVIGERGSELNYPEVVVYREEAAVPTHLIVYA 1254
            C+L+GCS  V+ D     V             A+G W       R+  A  T A    G + CK+ GC + VF DP T  ESDYCS  H         REC                       SRCA   G      S  C L GC  V + H ++   + YC EDHR+R  Q++LG N + +++R F  GTT   DF+L VL+  HP Y S  +QF+ KW KP   GG+S+ +I  ++VP DVRRKT  + + VGNV+RRFHGTSCS  C FFVDLRG PC +  CKVC+ICTHGF L+ NVG TARR+ F LRYG GLYFSSVSGKANDYA  SEKTD +GR++RCMF+ANVA G+AF T E  L  N   CPP G+DSV+GE G  LNY E+VVY++EAA+PTHLIVY+
Sbjct:   58 CKLDGCSLPVYFDSAKKHVXXXXXXXXXXXXXADGQWT------RSTSAGNTNA----GGSTCKLPGCHLGVFIDPATSLESDYCSKSHRAQANT---RECLRKGCTSTAWLANIEGPQYCS--SRCAIDDGGQKAGSSRSCKLAGCSEVALYHHQTGNALDYCGEDHRVRNEQQTLGTNGDTYVERIFHRGTTGTTDFKLCVLSKAHPHYPSLIDQFVNKWVKPEPVGGISVEKILTVEVPADVRRKTKTYEKTVGNVRRRFHGTSCSTKCNFFVDLRGNPCSDKGCKVCSICTHGFTLQGNVGGTARRTNFGLRYGEGLYFSSVSGKANDYADFSEKTDSNGRRLRCMFVANVAAGKAFKTHETSLQQNE--CPPAGYDSVVGEVGQGLNYDELVVYKDEAALPTHLIVYS 453          
BLAST of mRNA_H-canaliculatus_F_contig1341.2780.1 vs. uniprot
Match: D8LKU8_ECTSI (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKU8_ECTSI)

HSP 1 Score: 280 bits (715), Expect = 6.810e-84
Identity = 132/230 (57.39%), Postives = 169/230 (73.48%), Query Frame = 1
Query:  568 IDRTFRGGTTSADDFRLSVLTNRHPEYLSRKEQFIQKWEKPVSGGGVSILRIFKIKVPEDVRRKTADHMEQVGNVQRRFHGTSCSDVCTFFVDLRGGPCGESTCKVCNICTHGFMLRENVGDTARRSLFDLRYGAGLYFSSVSGKANDYAFESEKTDRSGRKVRCMFLANVAVGRAFITFEGKLDPNANLCPPPGFDSVIGERGSELNYPEVVVYREEAAVPTHLIVYAL 1257
            +++TFRGGTT A DF LS L+  HP+Y S   QF+ KW KP   G   +LRI ++KVP+D+ +KT  + +  GNV+RRFHGTSCS  C FFVDL+G PC    C VCNICTHGF+LR+NV  TARR+ +  RYG GLYFSSVSGK+NDYA +SEK    G+KVRCMF+ANV  G A++T +G L    ++CPP G+DSV+GE GS L + E+V Y +EAA+P++LIVYAL
Sbjct:    8 VEQTFRGGTTGATDFVLSALSKAHPQYPSLCHQFVSKWLKP---GVPRVLRILEVKVPDDIYQKTVCYKKAKGNVRRRFHGTSCSAQCNFFVDLKGNPCSSKACNVCNICTHGFVLRDNVRGTARRANYRRRYGEGLYFSSVSGKSNDYAQQSEKVGSDGKKVRCMFVANVTAGNAYLTQQGSL--GQDMCPPAGYDSVVGEVGSGLIHDELVAYEDEAAIPSYLIVYAL 232          
BLAST of mRNA_H-canaliculatus_F_contig1341.2780.1 vs. uniprot
Match: A0A6H5JPY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPY9_9PHAE)

HSP 1 Score: 275 bits (704), Expect = 1.590e-80
Identity = 154/375 (41.07%), Postives = 199/375 (53.07%), Query Frame = 1
Query:   16 CQLNGCSFTVHVDEDTGRVHNFCGRRHADEALANGGWQSPSRSARA------------------------------------AEAAATAAAAVKGAAQCKMEGCSVSVFRDPVTGEESDYCSNRHYVMGKALLNRECXXXXXXXXXXXXXXXXXXXXXXXSRCAGQVGMPHLMGSSECSLPGCVNVNMVHPRSREEMGYCCEDHRLRATQRSLGPNPEPFIDRTFRGGTTSADDFRLSVLTNRHPEYLSRKEQFIQKWEKPVSGGGVSILRIFKIKVPEDVRRKTADHMEQVGNVQRRFHGTSCSDVCTFFVDLRGGPCGESTCKVCNICTHGFMLRENVGDTARRSLFDLRYGAGLYFSSVSGKANDYAFESEK 1032
            CQL+GC+  +  DEDT  VH+FC RRHA+ A A G W  P     +                                    A+ AA     V     C+   C    + D  +G++  +C                                       SRCA   G  H +G  +CSLPGC +  M+H R+ ++MGYC + HR++A +R+L  NPE  +DRTFRGG +  DDF+LSVLT  H  + S KEQF+ K++KP+ G  +S+ RIFK++VP DVR K     +   N +RRFHGTSCSD C FF+DLRGGPCG   C VC+ICTHGF LR + G TA+R+   LRYG GLYFSSVSGKANDYA +SEK
Sbjct:   23 CQLHGCNAEIFFDEDTNTVHDFCCRRHANMARARGQWPRPGMQGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQPAAEEPLTV-----CQNVRCQRPAWMDIRSGDQLAFCG--------------------------------------SRCAYTCGAHHFVGQMKCSLPGCNDFTMLHDRTMDDMGYCRDYHRIKAEERNLTQNPEAHVDRTFRGGPS--DDFKLSVLTKSHQAHSSLKEQFLVKFQKPIDG--LSVERIFKVQVPGDVRHKHKVFEKATNNTRRRFHGTSCSDACRFFMDLRGGPCGRPDCNVCSICTHGFRLRGSAGRTAQRTNMKLRYGEGLYFSSVSGKANDYAAQSEK 350          
BLAST of mRNA_H-canaliculatus_F_contig1341.2780.1 vs. uniprot
Match: D8LS88_ECTSI (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS88_ECTSI)

HSP 1 Score: 274 bits (701), Expect = 5.990e-79
Identity = 141/277 (50.90%), Postives = 179/277 (64.62%), Query Frame = 1
Query:  433 SECSLPGCVNVNMVHPRSREEMGYCCEDHRLRATQRSLGP--NPEPFIDRTFRGGTTSADDFRLSVLTNRHPEYLSRKEQFIQKWEKPVSGGGVSILRIFKIKVPEDVRRKTADHMEQVGNVQRRFHGTSCSDVCTFFVDLRGGPCGESTCKVCNICTHGFMLRENVGDTARRSLFDLRYGAGLYFSSVSGKANDYAFESEKTDRSGRKVRCMFLANVAVGRAFITFEGKLDPNANLCPPPGFDSVIGERGSELNYPEVVVYREEAAVPTHLIVYAL 1257
            S C L  C    + H ++ E++GYC E HRL +   S G   + EP++   +  GT     F L  L   HPE  S + QF  KW KP    G+S++RIF+++VP +VR K   +   V N++RRFHGTSCSD C F VD +  PCG  +C +CNI   GF L ENVG TA    F+LRYG G+YFSSVSGKANDYA  + KT + G K+RCMF+ANVA G+A+ T E  LD     CPPPG++SV+GE G  LNY E+VVY+EEAA+PTHLIVYAL
Sbjct:  177 SVCKLRYCSVGTLHHLQTGEDLGYCSEGHRLLSKPPSKGQLRSSEPYVHGVYSVGTPR---FNLCALDEAHPECPSLRSQFSTKWVKPQPAEGISVVRIFRVEVPAEVRDKHDKYARTVRNIRRRFHGTSCSDGCNFIVDPQRSPCGLRSCSLCNISMRGFKLDENVGRTALARNFNLRYGKGVYFSSVSGKANDYADLTAKTAKDGTKLRCMFVANVAAGKAYSTKEKALDDGK--CPPPGYESVVGEVGQGLNYDELVVYKEEAALPTHLIVYAL 448          
BLAST of mRNA_H-canaliculatus_F_contig1341.2780.1 vs. uniprot
Match: D8LSB5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSB5_ECTSI)

HSP 1 Score: 272 bits (695), Expect = 1.370e-78
Identity = 129/215 (60.00%), Postives = 160/215 (74.42%), Query Frame = 1
Query:  388 SRCAGQVGMPHLMGSSECSLPGCVNVNMVHPRSREEMGYCCEDHRLRATQRSLGPNPEPFIDRTFRGGTTSADDFRLSVLTNRHPEYLSRKEQFIQKWEKPVSGGGVSILRIFKIKVPEDVRRKTADHMEQVGNVQRRFHGTSCSDVCTFFVDLRGGPCGESTCKVCNICTHGFMLRENVGDTARRSLFDLRYGAGLYFSSVSGKANDYAFESEK 1032
            SRCA   G  HL+G  +CSLPGC +  M+H R+ ++MGYCC+ HR++A +R+L  NPE  +DRTFRGG +  DDF+LSVLT  H  Y S KEQF+ K++KPV G  +S+ RIFK++VP DVR+K     E   N +RRFHGTSCSD C FF+DLRGGPCG   C VC+ICTHGF LR +VG TA+R+  +LRYG GLYFSSVSGKANDYA +SEK
Sbjct:  170 SRCAYTCGAQHLVGQMKCSLPGCNDFTMLHDRTMDDMGYCCDYHRIKAEERNLTQNPEAHVDRTFRGGPS--DDFKLSVLTKSHQAYSSLKEQFLVKFQKPVDG--LSVERIFKVQVPGDVRQKHKVFEEATNNTRRRFHGTSCSDACRFFMDLRGGPCGRPDCNVCSICTHGFRLRGSVGRTAQRTNMNLRYGEGLYFSSVSGKANDYAAQSEK 380          
BLAST of mRNA_H-canaliculatus_F_contig1341.2780.1 vs. uniprot
Match: D8LKU6_ECTSI (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKU6_ECTSI)

HSP 1 Score: 257 bits (656), Expect = 1.960e-74
Identity = 150/368 (40.76%), Postives = 188/368 (51.09%), Query Frame = 1
Query:   70 VHNFCGRRHADEALANGGWQSPSRSARAAEAAATAAAAVKGAAQCKMEGCSVSVFRDPVTGEESDYCSNRHYVMGKALLNRECXXXXXXXXXXXXXXXXXXXXXXXSRCAGQVGMPHLMGSSECSLPGCVNVNMVHPRSREEMGYCCEDHRLRATQRSLGPNPEPFIDRTFRGGTTSADDFRLSVLTNRHPEYLSRKEQFIQKWEKPVSGGGVSILRIFKIKVPEDVRRKTADHMEQVGNVQRRFHGTSCSDVCTFFVDLRGGPCGESTCKVCNICTHGFMLRENVGDTARRSLFDLRYGAGLYFSSVSGKANDYAFESEKTDRSGRKVRCMFLANVAVGRAFITFEGKLDPNANLCPPPGFDSVIGE 1173
            +H+FC + HA+EA+A  G                      GA++CK++GCS +V+RDPVTG ESDYCS  H     AL                                GQ GM  +                                                + + FRGGTT A DF LSVL+  H +Y S   QFI KW   V GG   + RI ++KVP D+  K A++ +  GN++RRFHGTSCS  C FFVDL+G PC    C VCNICT+GFML+ NVG TA+R+   LRYG GLYFSSVSGK+NDYA  SEK    G+KVRCMF+ANV  G A++T +  L    N+CPP G DSV+GE
Sbjct:    1 MHDFCSKHHANEAMARPGGG-------------------MGASECKLKGCSKNVYRDPVTGLESDYCSRGHQAHAIAL--------------------------------GQ-GMRTVTSH---------------------------------------------VQQVFRGGTTGATDFMLSVLSKSHHQYSSLCHQFISKW---VKGGVPHVRRILEVKVPADIYGKYANYKKAKGNIRRRFHGTSCSAGCNFFVDLKGNPCSSRGCNVCNICTNGFMLQGNVGGTAKRTSIGLRYGEGLYFSSVSGKSNDYAQGSEKVGSDGKKVRCMFIANVTAGNAYLTQQVSL--GQNMCPPAGHDSVVGE 266          
BLAST of mRNA_H-canaliculatus_F_contig1341.2780.1 vs. uniprot
Match: A0A6H5JBF5_9PHAE (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBF5_9PHAE)

HSP 1 Score: 219 bits (558), Expect = 1.050e-61
Identity = 113/217 (52.07%), Postives = 143/217 (65.90%), Query Frame = 1
Query:  616 LSVLTNRHPEYLSRKEQFIQKWEKPVSGGGVSILRIFKIKVPEDVRRKTADHMEQVGNVQRRFHGTSCSDVCTFFVDLRGG--PCGESTCKVCNICTHGFMLRENVGDTARRSLFDLRYGAGLYFSSVSGKANDYAFESEKTDRSGRKVRCMFLANVAVGRAFITFEGKLDPNANLCPPPGFDSVIGERGSELNYPEVVVYREEAAVPTHLIVYALQ 1260
            L +L     EY + +  F  +W KP    GVSI R++ I+V  ++R K   +    GN+ +RFHGTSC++ C F VD +GG  PCG+S+C VCNIC  GF L  NV  TAR +   LRYG G+Y +SVSGKANDYA  S K      ++RCMF+A+VAVGRAF T   +L   AN CPPPG+ SV+GE G  LN+ E VVY EEAA+PTHLIVYAL+
Sbjct:   17 LQMLEENSREYTALRGLFNARWMKPRPAKGVSIERVYSIQVSREMREKHERYKGMFGNLCQRFHGTSCNEGCNFMVDPQGGQAPCGKSSCSVCNICKLGFKLGANVAGTARATGVPLRYGEGIYLTSVSGKANDYASRSAKKIGIASELRCMFVASVAVGRAFKTKSTRLP--ANQCPPPGYQSVVGEVGQGLNFDEFVVYNEEAALPTHLIVYALR 231          
BLAST of mRNA_H-canaliculatus_F_contig1341.2780.1 vs. uniprot
Match: A0A813I6I7_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813I6I7_POLGL)

HSP 1 Score: 224 bits (570), Expect = 1.190e-60
Identity = 125/290 (43.10%), Postives = 169/290 (58.28%), Query Frame = 1
Query:  409 GMPHLMGSSECSLPGCVNVNMVHPRSREEMGYCCEDHRLRATQRSL-GPNPEPFIDRTFRGGTTSADDFRLSVLTNRHPEYLSRKEQFIQKWEKPVSGGGVSILRIFKIKVPEDVRRKTADHMEQVGNVQRRFHGTSCSDVCTFFVDLRGGPCGESTCKVCNICTHGFMLRENVGDT--ARRSLFDLRYGAGLYFSSVSGKANDYAFESEKTDRSGR----KVRCMFLANVAVGRAFITFEGKLDPNANLCPPPGFDSVIGERGSELNYPEVVVYREEAAVPTHLIVYAL 1257
            G PHL     C LPGCV       R  +  G+CC+DH  +A  R L  P     +DR   GG+    DF + +L  +HP+Y + K+QF+  W K   G    + R+ KI+   ++R   A++ + VGNV+RRFHGTS S+ CTF       PC +  C+VC IC   F L  + G+T    R+   LRYG GLYFS+ SGK+NDYA  SE+     R    + RCMF+ +VA+G+A +T EG L      CPPPG+D+V+GE G  LN+ EVVVY E AAVP+ L+VY+L
Sbjct:  175 GAPHL----RCGLPGCV-------RHAQCFGFCCQDHADKARARGLLAPQDPSTVDRVLLGGS---GDFCVELLRRQHPDYAAVKQQFLSSWRKSEQGPP-RVERLLKIRSALEIREAFAEYAQAVGNVRRRFHGTSQSESCTFGTHPEKAPCSDKKCRVCCICRRTFSLL-HAGETFGGPRNTSALRYGPGLYFSATSGKSNDYAEGSERMKHEARGAQRRWRCMFVCHVAIGKAHLTTEGWLPQQQ--CPPPGYDAVVGEVGENLNFDEVVVYDEAAAVPSFLVVYSL 446          
BLAST of mRNA_H-canaliculatus_F_contig1341.2780.1 vs. uniprot
Match: D7FXR2_ECTSI (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXR2_ECTSI)

HSP 1 Score: 222 bits (565), Expect = 3.460e-60
Identity = 126/254 (49.61%), Postives = 159/254 (62.60%), Query Frame = 1
Query:  511 EDHRLRATQRSLGPNPEPFIDRTFRGG-TTSADDFRLSVLTNRHPEYLSRKEQFIQKWEKPVSGGGVSILRIFKIKVPEDVRRKTADHMEQVGNVQRRFHGTSCSDVCTFFVDLRGG--PCGESTCKVCNICTHGFMLRENVGDTARRSLFDLRYGAGLYFSSVSGKANDYAFESEKTDRSGR-KVRCMFLANVAVGRAFITFEGKLDPNANLCPPPGFDSVIGERGSELNYPEVVVYREEAAVPTHLIVYALQ 1260
            ED R  AT+     N E    RT RG  +       L  L     E  +  + F  +W KP    GVSI+RIF I+V  +VR K   +  + GN+ +RFHGTSC++ C F VD +GG  PCGES+C VCNIC  GF L  NV  TAR + F LRYGAG+Y +SVSGKANDYA  S K  + G  ++RCMF+A+VA+G  F T   +L   A+ CPPPG+ SV+GE G  LN+ E VVY+EEAA+PTHLIVYAL+
Sbjct:  178 EDWRENATEDERKKNVEHEQRRTSRGVLSVGFSGSFLQRLEGNGAECKALCDLFNARWIKPRPENGVSIVRIFSIQVSREVREKHERYKGKFGNLCQRFHGTSCNEGCNFMVDPQGGQAPCGESSCSVCNICKLGFQLGPNVARTARATRFPLRYGAGIYLTSVSGKANDYASRSAK--KVGELELRCMFVASVALGNTFKTTSARLP--ADQCPPPGYHSVVGEAGQRLNFDEFVVYKEEAALPTHLIVYALR 427          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1341.2780.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LS86_ECTSI1.170e-20971.46PARP catalytic domain-containing protein n=2 Tax=E... [more]
D8LS87_ECTSI4.200e-11848.43PARP catalytic domain-containing protein n=1 Tax=E... [more]
D8LKU8_ECTSI6.810e-8457.39PARP catalytic domain-containing protein n=1 Tax=E... [more]
A0A6H5JPY9_9PHAE1.590e-8041.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LS88_ECTSI5.990e-7950.90PARP catalytic domain-containing protein n=1 Tax=E... [more]
D8LSB5_ECTSI1.370e-7860.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LKU6_ECTSI1.960e-7440.76PARP catalytic domain-containing protein n=1 Tax=E... [more]
A0A6H5JBF5_9PHAE1.050e-6152.07PARP catalytic domain-containing protein n=1 Tax=E... [more]
A0A813I6I7_POLGL1.190e-6043.10Hypothetical protein n=1 Tax=Polarella glacialis T... [more]
D7FXR2_ECTSI3.460e-6049.61PARP catalytic domain-containing protein n=1 Tax=E... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1341contigH-canaliculatus_F_contig1341:111..7949 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score365.5
Seed ortholog evalue2.7e-98
Seed eggNOG ortholog2880.D8LS87
EggNOG OGs28J37@1,2S14A@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionPoly(ADP-ribose) polymerase, catalytic domain
Ec32 orthologEc-12_004440.1
Exons8
Model size2970
Cds size1059
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1341.2780.1prot_H-canaliculatus_F_contig1341.2780.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig1341 318..6245 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929082.1223626-UTR-H-canaliculatus_F_contig1341:110..3171622929082.1223626-UTR-H-canaliculatus_F_contig1341:110..317Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1341 111..317 +
1696845672.2594252-UTR-H-canaliculatus_F_contig1341:110..3171696845672.2594252-UTR-H-canaliculatus_F_contig1341:110..317Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1341 111..317 +
1622929082.3250217-UTR-H-canaliculatus_F_contig1341:6245..79491622929082.3250217-UTR-H-canaliculatus_F_contig1341:6245..7949Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1341 6246..7949 +
1696845672.3686929-UTR-H-canaliculatus_F_contig1341:6245..79491696845672.3686929-UTR-H-canaliculatus_F_contig1341:6245..7949Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1341 6246..7949 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929082.1424253-CDS-H-canaliculatus_F_contig1341:317..3651622929082.1424253-CDS-H-canaliculatus_F_contig1341:317..365Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1341 318..365 +
1696845672.2709434-CDS-H-canaliculatus_F_contig1341:317..3651696845672.2709434-CDS-H-canaliculatus_F_contig1341:317..365Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1341 318..365 +
1622929082.1536252-CDS-H-canaliculatus_F_contig1341:1173..12561622929082.1536252-CDS-H-canaliculatus_F_contig1341:1173..1256Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1341 1174..1256 +
1696845672.2876031-CDS-H-canaliculatus_F_contig1341:1173..12561696845672.2876031-CDS-H-canaliculatus_F_contig1341:1173..1256Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1341 1174..1256 +
1622929082.2445722-CDS-H-canaliculatus_F_contig1341:1803..20111622929082.2445722-CDS-H-canaliculatus_F_contig1341:1803..2011Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1341 1804..2011 +
1696845672.3065434-CDS-H-canaliculatus_F_contig1341:1803..20111696845672.3065434-CDS-H-canaliculatus_F_contig1341:1803..2011Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1341 1804..2011 +
1622929082.2568798-CDS-H-canaliculatus_F_contig1341:2528..27171622929082.2568798-CDS-H-canaliculatus_F_contig1341:2528..2717Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1341 2529..2717 +
1696845672.3192048-CDS-H-canaliculatus_F_contig1341:2528..27171696845672.3192048-CDS-H-canaliculatus_F_contig1341:2528..2717Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1341 2529..2717 +
1622929082.2717779-CDS-H-canaliculatus_F_contig1341:3269..33861622929082.2717779-CDS-H-canaliculatus_F_contig1341:3269..3386Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1341 3270..3386 +
1696845672.3292704-CDS-H-canaliculatus_F_contig1341:3269..33861696845672.3292704-CDS-H-canaliculatus_F_contig1341:3269..3386Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1341 3270..3386 +
1622929082.2873816-CDS-H-canaliculatus_F_contig1341:4119..42991622929082.2873816-CDS-H-canaliculatus_F_contig1341:4119..4299Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1341 4120..4299 +
1696845672.338573-CDS-H-canaliculatus_F_contig1341:4119..42991696845672.338573-CDS-H-canaliculatus_F_contig1341:4119..4299Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1341 4120..4299 +
1622929082.29886-CDS-H-canaliculatus_F_contig1341:5631..57721622929082.29886-CDS-H-canaliculatus_F_contig1341:5631..5772Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1341 5632..5772 +
1696845672.3489816-CDS-H-canaliculatus_F_contig1341:5631..57721696845672.3489816-CDS-H-canaliculatus_F_contig1341:5631..5772Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1341 5632..5772 +
1622929082.3119354-CDS-H-canaliculatus_F_contig1341:6152..62451622929082.3119354-CDS-H-canaliculatus_F_contig1341:6152..6245Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1341 6153..6245 +
1696845672.3602452-CDS-H-canaliculatus_F_contig1341:6152..62451696845672.3602452-CDS-H-canaliculatus_F_contig1341:6152..6245Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1341 6153..6245 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig1341.2780.1

>prot_H-canaliculatus_F_contig1341.2780.1 ID=prot_H-canaliculatus_F_contig1341.2780.1|Name=mRNA_H-canaliculatus_F_contig1341.2780.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=353bp
MEGCSVSVFRDPVTGEESDYCSNRHYVMGKALLNRECIRDGCSRAAWVDE
RTGGVLDYCGSRCAGQVGMPHLMGSSECSLPGCVNVNMVHPRSREEMGYC
CEDHRLRATQRSLGPNPEPFIDRTFRGGTTSADDFRLSVLTNRHPEYLSR
KEQFIQKWEKPVSGGGVSILRIFKIKVPEDVRRKTADHMEQVGNVQRRFH
GTSCSDVCTFFVDLRGGPCGESTCKVCNICTHGFMLRENVGDTARRSLFD
LRYGAGLYFSSVSGKANDYAFESEKTDRSGRKVRCMFLANVAVGRAFITF
EGKLDPNANLCPPPGFDSVIGERGSELNYPEVVVYREEAAVPTHLIVYAL
QE*
back to top

mRNA from alignment at H-canaliculatus_F_contig1341:111..7949+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig1341.2780.1 ID=mRNA_H-canaliculatus_F_contig1341.2780.1|Name=mRNA_H-canaliculatus_F_contig1341.2780.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=7839bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1341:111..7949+ (Hapterophycus canaliculatus Oshoro5f female)
CCGTAGGCTCCTCGTTGCCAGCTGAACGGCTGCTCTTTCACCGTCCATGT AGATGAAGATACGGGGAGGGTGCACAACTTTTGCGGGCGCCGGCACGCAG ATGAAGCACTGGCGAATGGAGGCTGGCAGTCGCCATCTCGGAGTGCAAGG GCGGCAGAAGCGGCGGCGACGGCGGCGGCAGCGGTAAAGGGGGCCGCGCA GTGCAAGATGGAGGGCTGCTCTGTGTCAGTCTTCCGCGACCCGGTGACGG GAGAGGTGGGTTCTGCGGGAGAGTGAGAGATCCGGAGATGATGTAGGCGG CCTGCATAGCGGCCATCGCTATCGTTTGTTGTCTTTCTCGTTGATGTTGC CGTCGGCGTTGTTGTTGTTGCACGCGCGTCTGTCGTATGACTGATGTTCA TCGCCCATGTCGTGATCTTGAAGGTTGTGTTCCTTTGTTGCTGATGTTAC CATCACGCTGTTTCTGTCTGCGCTTTCCTTTTGATTTGTTTCTGCAGCTG CCTTGGCCTGGAGCACTCACTCGTGAGGCATGAGGAATTCTTTTTATAAA ACAAGTCAACAACACCGAAGGAACACCCACCTGAGACACTGTCCATCTCA AGGGGCTTTTGTTGATTCCATGCAGTGAGGGTTCCATTCGACAGGATGAA ATTATGTTTCAGTAGGCAAGTAGTGGACAAAACCGTGAAAAACGTAGGAT GGGGGTTGGACAAAAACAGAAAGACGGTTTTTAGGAGATGAATGGGATGG GGAAGATAACAGCAACGTTTATACCACGAGAACTTTGATACTTCCTGTGA TGATTCGACGTGTGAGAGAATTCGTTGCGCAGAAGCTTGGTCCATCGGTC GAACCCTTGATCACCGCCACATCGACGTTTTCCACATGCCCACGCTTGGA AGCTGATGAATTTCGTGTGGCCCTCAGTAGCCGTCTCTTTGCATACCATC AGTTTGCCTGTTTTGCAGAGATCCACCGTTGGTGCTGCCAGCTTCACTTG GCATCATTGCAACATGTTGACTCAAATAACGAATTTGCAATTTTGCTGTC CAAACCACAACAGGAATCGGACTACTGCAGCAACCGGCACTACGTAATGG GGAAAGCCTTGCTTAACAGGGAGTGTATCCGCGACGGCTGCAGCAGGTAC AGCCAGTTGGGTTTACGGGTTGACCACGAAGTACGTCACCATGCCGATTT TTTTGTTGATCTTCATATCTTCCTGCCGGTGCTTCCTTCCTCGCAACTTG CTTTGGCAAGTCCTAGACTCGGTGTCGATAAGAGCACCGTCGTATGATGA TTTCCAGCAGCGGTAAGACAGGCGGAAGAAGCAAGGAGAGAAGCAGGGAG AGCAGTACAAGTGTGCTCCAAAGCGAGCGCGCAACTTGAAGATCTGCTGT ACGCTGCGTCCCAGGTGGCTTGCACCCTTTTGTCTTGGTTTCTTCGTGTC GCCTACGACTCTTTTGCGTCATGTTGTGCGCCTTTCTGTCCTCGTTTGCT CCCGTACCCTCGACCCCCGACCTCCGATAGTGGCCTATTTTCTGCAGGCT AAAGCCAAGCATACAACGAAGATCCCCAGCCCCGAAATGCGTTTCTTTCT GATCGACAACAGGGACAATCTAGGCTGTGTGACTGCACACGCGATGTCTT GACACCCGTCCCGTCATGCCCGTCACTCGCGCCTGCATCATAGAGCCGCC TGGGTGGACGAAAGAACCGGTGGAGTCCTGGACTATTGCGGCAGCCGTTG CGCGGGCCAGGTGGGGATGCCCCACTTGATGGGCAGCAGCGAGTGCTCCC TCCCTGGGTGCGTCAACGTCAACATGGTCCACCCGCGGTCGCGGGAGGAG ATGGGATATTGCTGCGAAGACCACCGCCTTCGCGCGACGCAGCGCTCTTT GGTGAGTTTGCTTTGGAGAAATGGACCATGGGGGGTTGTCGGAGAGAAAA GAGGCCCCGGGAGAGGGAGGGGTTAGAATTCGCGGCCGATTGCGCGTATG CGGGCGAAGATCCTAGAATCCGCTCTCATCTGCAGCTGTTTGTGAGCTCC GGCTGGCGCAAAGTCCAAAAGTTGCGGGTTGAAGTCGGTCCGCCGCCTTA GGCAGGCGCCAGTATTGGGGAGGGCAGTGACGAAACGAGGGCGAAGGACG ACGCCCGAAGTGAACAGCAAATCCCCGGCAAGACCGTCCGGTCCACGGAC AAATACTAGTCTTCCTCGTCTAGAATGCGTCTTGGCTGTCTTGAGCTTCT CCCTTCGTCCTCCCTCTTTTGTTGCCTTTTCGCCCTACCGACGGCTCATT TTTTGTCTCCGTCGCTCTCTGCCATGTTCTCGTTGTGTCTCTTTTCTCCC GTCTCTGGCGTGTGATGGCCGAAAACTCGAACGCTCGACGGCTTGCGGCG ATGCTTGTGTGCTTCAAGGGGCCCAACCCGGAACCTTTCATCGATCGCAC CTTCCGGGGGGGCACGACCAGCGCCGACGACTTCCGGCTGAGCGTCCTTA CCAACCGCCACCCGGAGTACCTGAGCCGGAAGGAGCAATTCATCCAGAAG TGGGAAAAGCCCGTTTCCGGCGGAGGCGTGTCGATTTTAAGGATTTTCAA GATCAAGGTGCGTTGCGTGTGTATGCAGGTGCGCGTATGTGATTGCGATT AGGTGGGTGACTTGGTAGACCATATTTGAAGCCCGCCAGACAGGAAACCG AAAGGGGACGAGGCGTGCGGGCCTCGACTTCAGGCTTGTGATTTTCCCTA CCTTACGCTACCTTACGCTGCCTCACCTTATCTCACACACACGTAACCTT CCGTAACCTTCCGTAACCTTGCGTTGCCTTGTGTTACCTTATGTTGCCTT GCCGTATCTGGTCTTACGTCGACTTTCCAAGGCTCAAGATTCAGTTTCTG TGTGTGCCGACAAATTGGTTTCCCGGCTTGTTGCAACGTTACAAAAGACA CGCATATTCAGCAAGAAGTTAACGCCCTACCCTCTTTTGTGCTGGCGGGG TACTACGAAACTTCTTATCTCCTTGCCTCTCATCTTGCTGTTGCTGGCTT TGCTGCTGTTGTTTTATCAGAGTTTTTTTTTCGTTCGTAAGGATTTTCTG GCTCTGCCCCACCCCACGCGTCTTTCAATGGTCAATGGCAAACGACCACG TCCGCGCAGGTCCCCGAAGATGTACGCCGCAAGACCGCGGATCACATGGA GCAAGTTGGCAATGTGCAGCGACGCTTCCACGGCACCTCTTGCTCCGACG TGTGTACCTTCTTCGTCGACTTGAGGGTGAGTGGAATTGTAGCTGAGCTC AGATGAGTTGCGTTCGAAACATGTCGAAGGGAGTGAGCAGAGTTGTAGGT ATCCCGGAGATGTCCTGATGCGCCAGCTGGCGGCTGCTACCTCTCCTTCG GATGAGGCCTGGTGATATCGCAGACGTCGGTGAGCAGCAGGTAGAACGCA TGAGTTCATTCGAACTTCCGTAAAGCATCGATGAAACCCGCTAACAAAAA AAATGAACGCACCGGAGTGTATTCTTGGATACCTGAACGAGACAAACAGC GTGGGACATGCAGGGTAGGGCATTGTTCAGTGCGGTATAATATCGTGTGG CAATGCACCAGGAGTTGGCACTAGCGATAGGTGAAAGCAGCAGCGTCGTC TGTACGTGCCACAGCAGTCTTGTTTTCGCTGGTTGTCTTCTTCCTGTTCA TGCTGTTGATCGTCGCTACAGTAGAATCACTTGTTCACCTTTTGTAATCG GAAGTACTGCTCAACAGCAGCAGCTCGCAGTGACGAGCTGGGTGCGAAGA GCTTGGTCGAAAATGTACCCCTACCTGTGTGATTGGATGAAGACCTGTGC TCTGGTTTTACGTGGTTATCTTCGCGTTCCCCCTTTCGTACCTTACAGCG CTGCCAGACCGCACCCTTTCGCGGTACCGTCCCATCCCGCAAGACAAAAA GGGTGTGCAGTTGGAACCACCAATGTCCCCGCCCCTTTCCCTCGCCTCCC CTGCACCAGGGAGGGCCTTGCGGAGAGTCGACCTGCAAAGTGTGCAATAT CTGCACGCACGGTTTTATGCTCCGGGAGAACGTCGGGGACACGGCGAGGC GCTCACTGTTCGACCTGCGCTACGGGGCAGGCCTGTACTTCAGCAGCGTC TCCGGCAAGGCCAACGACTACGCCTTCGAGTCGGAGAAGGTATTTAGCGT CACCTTTGTTGCTGATGTCGCGACCGTTCCACAACCTAAAGGGACCTCGT TGTTTAGTTCGGCATCGGTCATTCGGTCTTGGTGTGTGTACTCGTTTATT TGGTGGTCTCGTTGCTGCTGGTGGCGGTGAAGATTTTGGGCACGTCGGAA GTTAGAGGATAAGTGTGTGCGACGTGCGTTGCTCTCTTCAGGGCTTGGAC GCCGGTGTTATGAGCCGGCTCCTAACGTGTCCGTGTGCACGCGCGATTGC GTGCGTCGCAGCTCATTGGTGGTGTCTTGATGCCGTGTTTCGAGGGAGGT TGGTTTCGGTACGACACGGCATAACAACAGCAGTACGACGCTGCATTAGT CGAAAATGCTCAAGACTAACCAGTGTTATGCTGTCTAGCTGTGGTGAAAG CCCAACCCACGACCCACAGCACGTATCCGTCTCCTTCTAGTCTTACCCCT GCATGCCTGCTGCTCACGTCCTGTTGTTGGTTGCCATATTTTCTTATCGT GCACCGCTGCGCGGTTGTGTATAGAGGGGTTGTCGACGGTATCCACGTAT CTCCCATGTTTGCAACAAGGCAACACCTCCAATCCTCCAAGAGAACCCTT GCTTCTCGAGAGATGGGGCTCACCCCCCCAAAGAAACAATGTCTTGTCAG TCTGTCTGAAGCAAGTTCACTCAAAAGCGGGCACCACGCACTTCGAGCCG AATCTCTGTGGCGCCAGAAACCACTCCACCCGTTGGGTAGTTGGAATGAT TTTAGGCAAGGTCCCACAAACTGATCGCATTGGGAAGCAAGGCAGGGGCT CTTGAAGGAAAAGCACCCCGCCTGCGCGAATGTGCCGCAGCCAATGTTTG CTTCCTTGAAAGCTTGCTCTCTGCGATCCGGACGGATAAAAAAGTAGGCT ACAGTAGGAACAGGCTGGCGAAGGGATAGTGTTGGGAGGGGTTTGCGAGC AGTAAGGGAAGGATCACCAAGCGTTGGCTGCGTTCGGCACGCCTTCTTGG CGTTCACGATGAAGGACCGACGAGGCCAACATTCATCACTGCTGAGGTGT CCGTCCCGTGTATCAAACTAAACGACTATACCGCTTGGCAAGGCACCTCG ACTTCACCCCTATGTCGGAGAGAAGTTCACGTCTCACTGCTCTCTTCCCC AACCTCATTCGAAGGATTTTTTTCTTTTTGGTCCGATCGCATCGTCTCGA CTGACAGCTTCGTTACACTGGTTGAAATAACTCCGTTACACTGGTTGAAG CAATTGACTCAAAACCTCGGCTGCGCGTGTTGGCCTCCGCCCCGACATGC GCATCATCCGTGGATGAACAGACAGACCGCTCAGGAAGAAAGGTGCGATG CATGTTCCTGGCTAACGTCGCCGTGGGTAGGGCTTTCATCACCTTCGAGG GAAAGCTAGACCCGAACGCAAACCTGTGCCCCCCCCCGGGCTTCGATTCC GTCATAGGAGAGGTCAGAGAAAGTGTGGTCGGATTGTTGATGGCGGCGCG TTTTTTTGGTGGATCAAGTCGTTCGTACCGTTATCGCAATTTTCATCCTT GCTTTCGGCGTTGCCGTTCGTGTGTTTGCTGTCGTTGTTGTTGTGATGTT GGTGGTTTCGGTGTGGTGGTCGTTGTCCTCGCCATCTAAGATGTTTTGCC TGAATGACGCATCCCGACCCCCCCTCCCCCATCCCCGCTCCCGCTCATCT GCTAGCCCGGTCGCGCTCCGCATTCATACTCTCATGCTGAACCTAGACAT GCACCCATTTACCTGTCCGTACAACTTTCGCCATTCACGTTCGCCGCGCG CTTCCTATTTTGCTGCGTAACTCGTGGACACGCGTACGTCAGAGGGGATC CGAGCTGAACTACCCAGAGGTGGTGGTGTATAGGGAAGAGGCCGCAGTGC CAACGCACTTGATTGTCTACGCTCTGCAAGAATAATGCGAGGGGGGTGGG ATTTCTCGACCTTTGGGGGAATCTTTCCGCTGTCGCTATGTCCGTGATTT TCTAGAAAGGCTCGAGAGTTGAAGTCACGCAGCGGTACACCTGTGAGTGG TACATGCCTTCGTGTCTATTGCGCATTCTACGATGTTCTACGATATTCGT AGAACAGTTTTTTACTCGGGTATTTTTCGTTCTGCATCGCCATTGGTGCT ATGTGGTAAGTGACGTCACACTAGGTCCGTCTTGAAAGGGTGCGGTTTCC GCATCCTAGGTACAGTCTGCTGTGAGGTCGTCACAAGTTGATTTATTATT AGTGTCTCTTTTCCTCTTGATGGCCGTTGTGTGTGTGCGTCCCACTGCGA TGACTTGCGATGACTCAGTGCAGTTTGGCCAGGGAACGGGTGGTTCGTGT AGGAAACTGTTCAGTCTGTGCACGTGCTATTCGCGTCGCTTTCTAGTTAG CGGGGACCTGCGAAAGAGGGAATCGTCCTCGACAGACGTTAAGGAATCGG CACCTTGCGGACGGTGTCCTCCACAGGACCAGTGAAACATGAAGAAGGTT CTTGGGGCGTATTATCGTCTAGTGCGGCAGGGGCAGTAGGCAGTGTGCAG ATGGAGCGGGGGAAGAAGGGAACCAATCTCGCTCTCCGCCTTGACGCTGG AGCCACGGCCAGCCATAAATCTTCGTGGAACTGAAACTGCGAGATTGCTT GTCGGATCGCTCAATTGCAGTTGTAGCAAGGGAATCTGAGTGCGATGCCA GCGACTGCTGCGGAAACGCACAGGAGTCGCACAAGGATTTTGAACTGTTT TCTCCTCTGTGCAAACTCCCCCTGCTGTACCCCAGTTCCATCGAGCTGCC TGTCACGGAGTGGTTGATGCAAGCGGGTGCCAGAGCAGTGTACTACCTTT GTTCCTCACGAGACACGCACCGTGCACAGTGAGGTCGGACGTTCCCTTCT TTCAGGATTTGTGCGTTCGTTTCCTTACAATATGAGTGCAAACTACGTTT GGTTGCGCGTCTTATGTATGGTTTTGTGTCCCTTTTGTTGATAGGTGGAC TGCGTTCGAGCCGGCTGAAAAAATTATCGGGCCGCAGCTGTTGCGTGTGA GTGCGCGTGTATGCCATTCCACCGTGAACGATGTTTTCATCGACAGATCG TACAACAAGATGCGCAGAAGATAATCTCGTATCTCGTGGTTTGCCCTGTT GATTCTCGAAGTAAATCCAGTCTTGGCAAAGGCAGCCTGTCGGTAGTTGT TACAAAACGCCTACTGTCAGAAATAAGTGTGGTCATGCGCGCCGGGCGTT GCCACAAGCCAAACCTGACTTTGAGCGTTGCATACCTTGGTTCTCTATTG ACGATCCCGTCGGTCAGAGTCGCCGGTGACCTTCGTTCCGCACCGCTCCA GGTTTCGTGGCATTGTTTTTCACGGTCGTCAGAGATCGCAAGCGGCGCCC TCTACAATTGTTTGGGGGTCTTGACGAGATTTGGTAGTTTAACGAGATAT GAGCTTGTTTTTGTCTCCTTTTTTTGTTTTCCCTGCTCCTTCGCATCCAC AGGGGTTTATTTTCTCTTATTTCAGATGGAACGATCTTATTTCAGATGGA ACGAAAAACTCGTCGTCGCGTTAACTCAATCTACTCGTTCATACTTTTTT TCAAGAAAACGTAACAACACCGTTAGAACATCTCCTGAG
back to top

Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1341:111..7949+

>mRNA_H-canaliculatus_F_contig1341.2780.1 ID=mRNA_H-canaliculatus_F_contig1341.2780.1|Name=mRNA_H-canaliculatus_F_contig1341.2780.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=2118bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1341:111..7949+ (Hapterophycus canaliculatus Oshoro5f female)
ATGGAGGGCTGCTCTGTGTCAGTCTTCCGCGACCCGGTGACGGGAGAGAT
GGAGGGCTGCTCTGTGTCAGTCTTCCGCGACCCGGTGACGGGAGAGGAAT
CGGACTACTGCAGCAACCGGCACTACGTAATGGGGAAAGCCTTGCTTAAC
AGGGAGTGTATCCGCGACGGCTGCAGCAGGAATCGGACTACTGCAGCAAC
CGGCACTACGTAATGGGGAAAGCCTTGCTTAACAGGGAGTGTATCCGCGA
CGGCTGCAGCAGAGCCGCCTGGGTGGACGAAAGAACCGGTGGAGTCCTGG
ACTATTGCGGCAGCCGTTGCGCGGGCCAGGTGGGGATGCCCCACTTGATG
GGCAGCAGCGAGTGCTCCCTCCCTGGGTGCGTCAACGTCAACATGGTCCA
CCCGCGGTCGCGGGAGGAGATGGGATATTGCTGCGAAGACCACCGCCTTC
GCGCGACGCAGCGCTCTTTGAGCCGCCTGGGTGGACGAAAGAACCGGTGG
AGTCCTGGACTATTGCGGCAGCCGTTGCGCGGGCCAGGTGGGGATGCCCC
ACTTGATGGGCAGCAGCGAGTGCTCCCTCCCTGGGTGCGTCAACGTCAAC
ATGGTCCACCCGCGGTCGCGGGAGGAGATGGGATATTGCTGCGAAGACCA
CCGCCTTCGCGCGACGCAGCGCTCTTTGGGGCCCAACCCGGAACCTTTCA
TCGATCGCACCTTCCGGGGGGGCACGACCAGCGCCGACGACTTCCGGCTG
AGCGTCCTTACCAACCGCCACCCGGAGTACCTGAGCCGGAAGGAGCAATT
CATCCAGAAGTGGGAAAAGCCCGTTTCCGGCGGAGGCGTGTCGATTTTAA
GGATTTTCAAGATCAAGGGGCCCAACCCGGAACCTTTCATCGATCGCACC
TTCCGGGGGGGCACGACCAGCGCCGACGACTTCCGGCTGAGCGTCCTTAC
CAACCGCCACCCGGAGTACCTGAGCCGGAAGGAGCAATTCATCCAGAAGT
GGGAAAAGCCCGTTTCCGGCGGAGGCGTGTCGATTTTAAGGATTTTCAAG
ATCAAGGTCCCCGAAGATGTACGCCGCAAGACCGCGGATCACATGGAGCA
AGTTGGCAATGTGCAGCGACGCTTCCACGGCACCTCTTGCTCCGACGTGT
GTACCTTCTTCGTCGACTTGAGGGTCCCCGAAGATGTACGCCGCAAGACC
GCGGATCACATGGAGCAAGTTGGCAATGTGCAGCGACGCTTCCACGGCAC
CTCTTGCTCCGACGTGTGTACCTTCTTCGTCGACTTGAGGGGAGGGCCTT
GCGGAGAGTCGACCTGCAAAGTGTGCAATATCTGCACGCACGGTTTTATG
CTCCGGGAGAACGTCGGGGACACGGCGAGGCGCTCACTGTTCGACCTGCG
CTACGGGGCAGGCCTGTACTTCAGCAGCGTCTCCGGCAAGGCCAACGACT
ACGCCTTCGAGTCGGAGAAGGGAGGGCCTTGCGGAGAGTCGACCTGCAAA
GTGTGCAATATCTGCACGCACGGTTTTATGCTCCGGGAGAACGTCGGGGA
CACGGCGAGGCGCTCACTGTTCGACCTGCGCTACGGGGCAGGCCTGTACT
TCAGCAGCGTCTCCGGCAAGGCCAACGACTACGCCTTCGAGTCGGAGAAG
ACAGACCGCTCAGGAAGAAAGGTGCGATGCATGTTCCTGGCTAACGTCGC
CGTGGGTAGGGCTTTCATCACCTTCGAGGGAAAGCTAGACCCGAACGCAA
ACCTGTGCCCCCCCCCGGGCTTCGATTCCGTCATAGGAGAGACAGACCGC
TCAGGAAGAAAGGTGCGATGCATGTTCCTGGCTAACGTCGCCGTGGGTAG
GGCTTTCATCACCTTCGAGGGAAAGCTAGACCCGAACGCAAACCTGTGCC
CCCCCCCGGGCTTCGATTCCGTCATAGGAGAGAGGGGATCCGAGCTGAAC
TACCCAGAGGTGGTGGTGTATAGGGAAGAGGCCGCAGTGCCAACGCACTT
GATTGTCTACGCTCTGCAAGAATAAAGGGGATCCGAGCTGAACTACCCAG
AGGTGGTGGTGTATAGGGAAGAGGCCGCAGTGCCAACGCACTTGATTGTC
TACGCTCTGCAAGAATAA
back to top