mRNA_H-canaliculatus_F_contig134.2772.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig134.2772.1 vs. uniprot
Match: D8LGN2_ECTSI (Kinesin motor domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGN2_ECTSI) HSP 1 Score: 156 bits (395), Expect = 1.910e-38 Identity = 87/122 (71.31%), Postives = 95/122 (77.87%), Query Frame = 2
Query: 677 GTVFAYGATGAGKTYTMSGHEQVLGSSKGPGGRPRLGN-RGR--PAAGXXXXXXXXXXXXXXXGINDETAGLVPRSMQHLFQQISALPPAITMRMRASFYEIYNEVVYDLLAQGDRRPLQVR 1033
GTVFAYGATGAGKTYTMSG EQVLG S+GPGGR R GN RG+ PAA G++D T GLVPRSM+ LFQQ+SALPPA+TMR+RASFYEIYNEVVYDLL QGDRRPLQVR
Sbjct: 86 GTVFAYGATGAGKTYTMSGREQVLGPSRGPGGRVRPGNNRGKAPPAA--------TGRAAPVAGVSDGTEGLVPRSMRFLFQQVSALPPAVTMRIRASFYEIYNEVVYDLLTQGDRRPLQVR 199
BLAST of mRNA_H-canaliculatus_F_contig134.2772.1 vs. uniprot
Match: A0A6H5JAE7_9PHAE (Kinesin motor domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAE7_9PHAE) HSP 1 Score: 154 bits (390), Expect = 5.560e-38 Identity = 86/123 (69.92%), Postives = 95/123 (77.24%), Query Frame = 2
Query: 677 GTVFAYGATGAGKTYTMSGHEQVLGSSKGPGGRPRLGN-RGR---PAAGXXXXXXXXXXXXXXXGINDETAGLVPRSMQHLFQQISALPPAITMRMRASFYEIYNEVVYDLLAQGDRRPLQVR 1033
GTVFAYGATGAGKTYTMSG EQVLG S+GPGGR R GN RG+ PAA G++D T GLVPRSM+ LFQQ+SALPPA+TMR+RASFYEIYNEVVYDLL +GDRRPLQVR
Sbjct: 222 GTVFAYGATGAGKTYTMSGREQVLGPSRGPGGRVRPGNNRGKAPPPAA--------PGRAAPAAGVSDGTEGLVPRSMRFLFQQVSALPPAVTMRIRASFYEIYNEVVYDLLTKGDRRPLQVR 336
BLAST of mRNA_H-canaliculatus_F_contig134.2772.1 vs. uniprot
Match: A0A482UFD7_9ARCH (Kinesin motor domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482UFD7_9ARCH) HSP 1 Score: 73.6 bits (179), Expect = 1.480e-10 Identity = 45/116 (38.79%), Postives = 61/116 (52.59%), Query Frame = 2
Query: 683 VFAYGATGAGKTYTMSGHEQVLGSSKGPGGRPRLGNRGRPAAGXXXXXXXXXXXXXXXGINDETAGLVPRSMQHLFQQISALPPAITMRMRASFYEIYNEVVYDLLAQ-GDRRPLQ 1027
V AYG TG+GKTYTMSGHE+ L S ++D +AGL+ R++ +LF I+A PP + +RAS+ EIYNE+VYDLL G+ PL+
Sbjct: 109 VLAYGQTGSGKTYTMSGHEEHLSSHT-------------------------------FSVSDASAGLILRAVDYLFSSIAAAPPDVRTIVRASYCEIYNEMVYDLLNMTGESLPLR 193
BLAST of mRNA_H-canaliculatus_F_contig134.2772.1 vs. uniprot
Match: A0A836CKM9_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKM9_9STRA) HSP 1 Score: 72.0 bits (175), Expect = 5.250e-10 Identity = 51/120 (42.50%), Postives = 65/120 (54.17%), Query Frame = 2
Query: 680 TVFAYGATGAGKTYTMSGHEQVLGSSKGPGGRPRLGNRGRPAAGXXXXXXXXXXXXXXXGINDETAGLVPRSMQHLFQQISALPPAITMR--MRASFYEIYNEVVYDLLAQGDRRPLQVR 1033
TVFAYGATG+GKT+ +SG EQ+ S G GG L G E+ GLVPRSM HLF++++ A R +RAS+ E+YNE V+DLL + PLQVR
Sbjct: 151 TVFAYGATGSGKTFCLSGLEQLQASRGGQGGGGGL-----------------------QGGAGESEGLVPRSMAHLFERMARSNAAADTRYRVRASYCEVYNEQVFDLL-HLQKTPLQVR 246
BLAST of mRNA_H-canaliculatus_F_contig134.2772.1 vs. uniprot
Match: A0A2P4X8I0_9STRA (Kinesin-like protein n=2 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X8I0_9STRA) HSP 1 Score: 68.2 bits (165), Expect = 7.240e-9 Identity = 42/107 (39.25%), Postives = 57/107 (53.27%), Query Frame = 2
Query: 680 TVFAYGATGAGKTYTMSGHEQVLGSSKGPGGRPRLGNRGRPAAGXXXXXXXXXXXXXXXGINDETAGLVPRSMQHLFQQISALPPAITMRMRASFYEIYNEVVYDLL 1000
TVFAYG TG+GKTY+MSG +++ G PR G G + D +AGL+PRS++HLF + + +RAS+ EIYNE V+DLL
Sbjct: 82 TVFAYGQTGSGKTYSMSGLNELV-----AGTEPREGRMG-----------------ISNNVLDLSAGLIPRSLKHLFGLLDQAASNVNTVVRASYCEIYNEQVFDLL 166
BLAST of mRNA_H-canaliculatus_F_contig134.2772.1 vs. uniprot
Match: H3G5R6_PHYRM (Kinesin-like protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G5R6_PHYRM) HSP 1 Score: 67.4 bits (163), Expect = 8.940e-9 Identity = 41/110 (37.27%), Postives = 57/110 (51.82%), Query Frame = 2
Query: 680 TVFAYGATGAGKTYTMSGHEQVLGSSKGPGGRPRLGNRGRPAAGXXXXXXXXXXXXXXXGINDETAGLVPRSMQHLFQQISALPPAITMRMRASFYEIYNEVVYDLLAQG 1009
TVFAYG TG+GKTY+MSG +++L S G N R + + GL+PR+++HLF + P + +RAS+ EIYNE V+DLL G
Sbjct: 92 TVFAYGQTGSGKTYSMSGLDELLAGSDSREGLVGASNNAR----------------------ELSDGLIPRALKHLFALLEQAPIDVKTVVRASYCEIYNEQVFDLLNPG 179
BLAST of mRNA_H-canaliculatus_F_contig134.2772.1 vs. uniprot
Match: A0A8K0FYN3_9COLE (Uncharacterized protein n=1 Tax=Ignelater luminosus TaxID=2038154 RepID=A0A8K0FYN3_9COLE) HSP 1 Score: 68.2 bits (165), Expect = 9.490e-9 Identity = 40/108 (37.04%), Postives = 55/108 (50.93%), Query Frame = 2
Query: 680 TVFAYGATGAGKTYTMSGHEQVLGSSKGPGGRPRLGNRGRPAAGXXXXXXXXXXXXXXXGINDETAGLVPRSMQHLFQQISALPPAITMRMRASFYEIYNEVVYDLLA 1003
T+FAYG TG GKTYTM+G + +G S DE AG++PR+M HLF ++S++P T+ ASF EIYNE ++DLL+
Sbjct: 90 TIFAYGQTGTGKTYTMTGESKTIGMSL---------------------------------EGDEQAGIIPRAMAHLFDELSSIPRQYTVH--ASFLEIYNEELFDLLS 162
BLAST of mRNA_H-canaliculatus_F_contig134.2772.1 vs. uniprot
Match: A0A6G0XKQ8_9STRA (Kinesin-like protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XKQ8_9STRA) HSP 1 Score: 66.2 bits (160), Expect = 3.030e-8 Identity = 48/120 (40.00%), Postives = 64/120 (53.33%), Query Frame = 2
Query: 680 TVFAYGATGAGKTYTMSGHEQVLGSSKGPGGRPRLGNRGRPAAGXXXXXXXXXXXXXXXGINDETAGLVPRSMQHLFQQISALPPAITMRMRASFYEIYNEVVYDLL--AQGDRRPLQVR 1033
TVFAYG TG+GKTY+MSG E+ LG +K ++G +++ GL+PRS+++LFQ I+A M+AS+ EIYNE YDLL A G PL VR
Sbjct: 52 TVFAYGQTGSGKTYSMSGLEEKLGVAKDH-------SKGE----------------------EQSDGLIPRSVRYLFQAINAKSNDTNFVMKASYCEIYNEQAYDLLNTASG---PLNVR 139
BLAST of mRNA_H-canaliculatus_F_contig134.2772.1 vs. uniprot
Match: A0A3F2RMG2_9STRA (Kinesin-like protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RMG2_9STRA) HSP 1 Score: 64.7 bits (156), Expect = 4.380e-8 Identity = 39/110 (35.45%), Postives = 57/110 (51.82%), Query Frame = 2
Query: 680 TVFAYGATGAGKTYTMSGHEQVLGSSKGPGGRPRLGNRGRPAAGXXXXXXXXXXXXXXXGINDETAGLVPRSMQHLFQQISALPPAITMRMRASFYEIYNEVVYDLLAQG 1009
T+FAYG TG+GKTY+MSG +++L G PR+ + + GL+PR+++HLF + P + +RAS+ EIYNE V+DLL G
Sbjct: 58 TIFAYGQTGSGKTYSMSGLDELL-----VGTGPRV-----------------ERVKISVNTTELSDGLIPRALKHLFTLLEQAPSEVKTVVRASYCEIYNEQVFDLLNPG 145
BLAST of mRNA_H-canaliculatus_F_contig134.2772.1 vs. uniprot
Match: W2R9C9_PHYPN (Kinesin-like protein n=7 Tax=Phytophthora parasitica TaxID=4792 RepID=W2R9C9_PHYPN) HSP 1 Score: 65.9 bits (159), Expect = 4.480e-8 Identity = 41/110 (37.27%), Postives = 57/110 (51.82%), Query Frame = 2
Query: 680 TVFAYGATGAGKTYTMSGHEQVLGSSKGPGGRPRLGNRGRPAAGXXXXXXXXXXXXXXXGINDETAGLVPRSMQHLFQQISALPPAITMRMRASFYEIYNEVVYDLLAQG 1009
TVFAYG TG+GKTY+MSG ++L ++ L N G D + GL+PRS++H+F + P + +RAS+ EIYNE V+DLL G
Sbjct: 174 TVFAYGQTGSGKTYSMSGLNELLAGTE-------LRNEGM----------------GDSNAMDLSDGLIPRSLKHIFSLLDQAPIDVKTVVRASYCEIYNEQVFDLLNPG 260 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig134.2772.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig134.2772.1 >prot_H-canaliculatus_F_contig134.2772.1 ID=prot_H-canaliculatus_F_contig134.2772.1|Name=mRNA_H-canaliculatus_F_contig134.2772.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=156bp MTTLISVTTRCLHLLTHAVRPGTVFAYGATGAGKTYTMSGHEQVLGSSKGback to top mRNA from alignment at H-canaliculatus_F_contig134:49685..50765+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig134.2772.1 ID=mRNA_H-canaliculatus_F_contig134.2772.1|Name=mRNA_H-canaliculatus_F_contig134.2772.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=1081bp|location=Sequence derived from alignment at H-canaliculatus_F_contig134:49685..50765+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig134:49685..50765+ >mRNA_H-canaliculatus_F_contig134.2772.1 ID=mRNA_H-canaliculatus_F_contig134.2772.1|Name=mRNA_H-canaliculatus_F_contig134.2772.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=936bp|location=Sequence derived from alignment at H-canaliculatus_F_contig134:49685..50765+ (Hapterophycus canaliculatus Oshoro5f female)back to top |