mRNA_H-canaliculatus_F_contig1339.2755.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig1339.2755.1 vs. uniprot
Match: D8LG51_ECTSI (TrmE, organellal GTPase involved in tRNA modification n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG51_ECTSI) HSP 1 Score: 802 bits (2072), Expect = 7.400e-274 Identity = 533/868 (61.41%), Postives = 572/868 (65.90%), Query Frame = 3
Query: 102 LVVSLLQLLLSLEGSDCFTTTYPVLPARTAATATTWTTRAVMRPPTHVAATTSEVCQ-LLLLLTSGSRRCQYLPPLPSASAPRVR---GTVCSTA-----VGYAAVPATSSGT------------EQLGLPPTTCQPRGAXXXXXXXXXXXXXXLSRRSKRQQYAVGSCRVWALSATKQAGSSATTMTSTGQEGGDLF-TARSPFSTSSSSVASSSEDTIFALATGNAGPAGVAVIRISGPRSAQVLEALTAGQGAAGASGGAVGVQSPQQQDAWISMGMDTAVDSALEAAARRVVKEEEAGPRLLPFPAARRAVVRRLYDPVTRDLLDEALVLWMPGPRSFTGEDTVELHTHGSRAVINGVLDALASMGMAGGDADAGEAMDVGGRVRLAERGEFTQRAYGNGRMDLTGVEGLADLIAADTAAQRKQALKQMGGALRDMYEEWRHQLKGCLAHAEAVIDFGDDEEDVGGDAAFAAMMPRVESLATEIQKHLRDGGRGEIVRSGVRVAIVGPPNAGKSSLLNLLAARPAAIVSPVAGTTRDVVEVQMDIAGLPVTLSDTAGLREATDDEVEREGMRRARGAVDNAHLAIFVVDSTNADGATALLRQLREEAAAAAGQXXXTAAQRGDGDGYEGGVLGGSTGG--AALDDLILVANKADLSIPDXXXXXXXXXXXXXXXXXXLTSL-----------------AAEAA---AGALAPDGSAVAXXXXXXXXXXXXXXXXXXXXXXXXXEGAEIEGGGHRGRRQRPRPVWKISCKTKEGLDGFMGHLEAEVRSRFQGATDDESPLITRRRHRQHVEACLLALRAAQRPRMPLDLAAEELRIASSELGRITGAVGVEELLDVIFRDFCIGK 2573
L++ L L+LS G+ CF +PA +A +TT TTRA+ P H T++ CQ LLLLL S +R LP +PS S R GT+ ST + AA P + L PT P L R AVGS + T+ T +E GDL T RSP ++SSS SSEDTIFALATGNAGPAGVAV+RISGP SAQVL+ALT+ A + S +A S G D V ++ AA VV AG RL PFPAARRAVVRRLYDP T DLLDEALVLWMPGPRSFTGEDTVELHTHGSRAVINGVLDALA MG A G RVRLAERGEFTQRAYGNGRMDLTGVEGLADLIAADTAAQRKQALKQMGGALRDMYEEWRHQLKGCLAHAEAVIDFGDDEEDVGGDAAFAAMMPRV LA EI +HLRDGGRGEIVRSGVRVAIVGPPNAGKSSLLNLLAARPAAIVSPVAGTTRDVVEVQMDIAGLPVTLSDTAGL +ATDDE+EREGMRRAR AVDNAHLAIFVVD+TN DGATALL +LREEA A + TAAQR D EG GS+GG AALDDLI+VANKADL++ LTSL AEA AGA DG A EG E G GR VWK+SCKTKEGLDGFM HLEAEVRSRFQGA DDESPLITRRRHRQHVEACLLALRAAQRP+MPLDLAAEELRIASSELGRITGAVGVEELLDVIFRDFCIGK
Sbjct: 12 LLLVLSPLVLSHVGAPCF------IPASSAGLSTTATTRAMRLAP-HT--TSTSACQRLLLLLASHPKRRNLLPHIPSTSTLRASLHGGTITSTRGATPPMAPAASPLLPRXXXXXXXXXXXRRLQHLAASPTGTSPTNPIARGPTGEPSPRPALRR-------AVGS--------------NMKTLPRTNKEDGDLISTTRSPLPSASSS---SSEDTIFALATGNAGPAGVAVVRISGPLSAQVLQALTS----------AANLSSVTAAEA--SAGGDAGVAAS---AAPAVVNGGGAGRRLPPFPAARRAVVRRLYDPATGDLLDEALVLWMPGPRSFTGEDTVELHTHGSRAVINGVLDALAGMGAASGMR----------RVRLAERGEFTQRAYGNGRMDLTGVEGLADLIAADTAAQRKQALKQMGGALRDMYEEWRHQLKGCLAHAEAVIDFGDDEEDVGGDAAFAAMMPRVRGLAAEIDRHLRDGGRGEIVRSGVRVAIVGPPNAGKSSLLNLLAARPAAIVSPVAGTTRDVVEVQMDIAGLPVTLSDTAGLPKATDDEIEREGMRRARSAVDNAHLAIFVVDATNTDGATALLGKLREEAKEAEAEAAATAAQRDDAAEMEGVFGSGSSGGGSAALDDLIVVANKADLALT----LLEGESGEAEHHEQELTSLXXXXXXXXXXXXXGPGRTAEAVGSRAGAAEMDGVGAATRGT---------------------EGDEEGRSGGGGR------VWKLSCKTKEGLDGFMEHLEAEVRSRFQGAADDESPLITRRRHRQHVEACLLALRAAQRPQMPLDLAAEELRIASSELGRITGAVGVEELLDVIFRDFCIGK 790
BLAST of mRNA_H-canaliculatus_F_contig1339.2755.1 vs. uniprot
Match: A0A6H5K111_9PHAE (TrmE-type G domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K111_9PHAE) HSP 1 Score: 782 bits (2019), Expect = 2.130e-268 Identity = 473/662 (71.45%), Postives = 493/662 (74.47%), Query Frame = 3
Query: 606 TGQEGGDLF-TARSPFSTSSSSVASSSEDTIFALATGNAGPAGVAVIRISGPRSAQVLEALTAGQGAAGASGGAVGVQSPQQQDAWISMGMDTAVDSALEAAARRVVKEEEAGPRLLPFPAARRAVVRRLYDPVTRDLLDEALVLWMPGPRSFTGEDTVELHTHGSRAVINGVLDALASMGMAGGDADAGEAMDVGGRVRLAERGEFTQRAYGNGRMDLTGVEGLADLIAADTAAQRKQALKQMGGALRDMYEEWRHQLKGCLAHAEAVIDFGDDEEDVGGDAAFAAMMPRVESLATEIQKHLRDGGRGEIVRSGVRVAIVGPPNAGKSSLLNLLAARPAAIVSPVAGTTRDVVEVQMDIAGLPVTLSDTAGLREATDDEVEREGMRRARGAVDNAHLAIFVVDSTNADGATALLRQLREEA--AAAAGQXXXTAAQRGDGDGYEGGVLGGSTGGAA---LDDLILVANKADLSIPDXXXXXXXXXXXXXXXXXXLTSLAAEAAAGALAPDGSAVAXXXXXXXXXXXXXXXXXXXXXXXXXEGAEIEGGGHRGRRQRPRPVWKISCKTKEGLDGFMGHLEAEVRSRFQGATDDESPLITRRRHRQHVEACLLALRAAQRPRMPLDLAAEELRIASSELGRITGAVGVEELLDVIFRDFCIGK 2573
T +E GDL TARSP + SSS SSEDTIFALATGNAGPAGVAV+RISGP SAQVL+ALT+ A + S +A S G D V A AG RL PFPAARRAVVRRLYDP T DLLDEALVLWMPGPRSFTGEDTVELHTHGSRAVINGVLDALA+MG A G RVRLAERGEFTQRAYGNGRMDLTGVEGLADL+AADTAAQRKQALKQMGGALRDMYEEWRHQLKGCLAHAEAVIDFGDDEEDVGGDAAF+AMMPRV LA EI +HLRDGGRGEIVRSGVRVAIVGPPNAGKSSLLNLLAARPAAIVSPVAGTTRDVVEVQMDIAGLPVTLSDTAGLREATDDE+EREGMRRAR AVDNAHLAIFVVD+TN DGATALL +LREEA A A + TAAQR D GV GG LDDLI+VANKADL++ LTSLAA AAA A A EG E G GR VWK+SCKTKEGLDGFM HLEAEVRSRFQGA DDESPLITRRRHRQHVEACLLALRAAQRP+MPLDLAAEELRIASSELGRITGAVGVEELLDVIFRDFCIGK
Sbjct: 7 TNKEDGDLIGTARSPLPSPSSS---SSEDTIFALATGNAGPAGVAVVRISGPLSAQVLQALTS----------ATTLSSATAAEA--SAGRDAGV--AXXXXXXXXXXXXXAGRRLPPFPAARRAVVRRLYDPATGDLLDEALVLWMPGPRSFTGEDTVELHTHGSRAVINGVLDALAAMGAASGLR----------RVRLAERGEFTQRAYGNGRMDLTGVEGLADLVAADTAAQRKQALKQMGGALRDMYEEWRHQLKGCLAHAEAVIDFGDDEEDVGGDAAFSAMMPRVRGLAAEIDRHLRDGGRGEIVRSGVRVAIVGPPNAGKSSLLNLLAARPAAIVSPVAGTTRDVVEVQMDIAGLPVTLSDTAGLREATDDEIEREGMRRARSAVDNAHLAIFVVDATNTDGATALLGKLREEAKEAEAEAEAAVTAAQR-DYAAETEGVFGGXXXXXXXXXLDDLIVVANKADLALT----LLEGESGEADHHERELTSLAAAAAAATXASGPGTTAEAVGSRAGAAETDGVGAATRGT---EGDEEGTSGSGGR------VWKVSCKTKEGLDGFMEHLEAEVRSRFQGAADDESPLITRRRHRQHVEACLLALRAAQRPQMPLDLAAEELRIASSELGRITGAVGVEELLDVIFRDFCIGK 627
BLAST of mRNA_H-canaliculatus_F_contig1339.2755.1 vs. uniprot
Match: A0A836CK05_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK05_9STRA) HSP 1 Score: 500 bits (1288), Expect = 1.150e-161 Identity = 316/633 (49.92%), Postives = 366/633 (57.82%), Query Frame = 3
Query: 687 DTIFALATGNAGPAGVAVIRISGPRSAQVLEALTAGQGAAGASGGAVGVQSPQQQDAWISMGMDTAVDSALEAAARRVVKEEEAGPRLLPFPAARRAVVRRLYDPVTRDLLDEALVLWMPGPRSFTGEDTVELHTHGSRAVINGVLDALASMGMAGGDADAGEAMDVGGRVRLAERGEFTQRAYGNGRMDLTGVEGLADLIAADTAAQRKQALKQMGGALRDMYEEWRHQLKGCLAHAEAVIDFGDDEEDVGGDAAFAAMMPRVESLATEIQKHLRDGGRGEIVRSGVRVAIVGPPNAGKSSLLNLLAARPAAIVSPVAGTTRDVVEVQMDIAGLPVTLSDTAGLR--EATDDEVEREGMRRARGAVDNAHLAIFVVDSTN-ADGATALLRQLREEAAAAAGQXXXTAAQRGDGDGYEGGVLGGSTGGAALDDLILVANKADLSIPDXXXXXXXXXXXXXXXXXXLTSLAAEAAAGALAPDGSAVAXXXXXXXXXXXXXXXXXXXXXXXXXEGAEIEGGGHRGRRQRPRPVWKISCKTKEGLDGFMGHLEAEVRSRFQGATDDE-SPLITRRRHRQHVEACLLALRAAQRPRMPLDLAAEELRIASSELGRITGAVGVEELLDVIFRDFCIGK 2573
DTIFAL++G AG AGVAVIR+SGP + L L G R P ARRA VRRLYDPV DLLDEALVLWMPGPRSFTGEDT ELHTHGSRAV+ GVL AL ++ +R AERGEFTQRAYGNGRMDLT VEGLADLIAADTA QR+QAL+QMGGAL+D YE WR +L CLAH EAVIDFGDDE+DV + A+AA+ P+V L E++ HL D RGEIVR+GVRVAI GPPNAGKSSLLN+LA RPAAIVSP+AGTTRDVV++Q+DIAGLPV LSDTAGLR EA D+VEREG+RRAR AV ++ L IFV DS+N A+GA AL + A G +ILV+NKADL TS + A+ G +PVW++SCKT EG++ F+ HLE E+ R+Q E +PLITR RHR HV+ACL AL + P +P+DLAAEELR AS+ELGRITGAV VEELLDVIFRDFCIGK
Sbjct: 4 DTIFALSSGPAGQAGVAVIRVSGPAAGDALHTLITAPG------------------------------------------------RHAKMPEARRAAVRRLYDPVKGDLLDEALVLWMPGPRSFTGEDTTELHTHGSRAVVGGVLGALGTIP----------------GLRPAERGEFTQRAYGNGRMDLTEVEGLADLIAADTAEQRRQALRQMGGALKDKYESWREELTKCLAHTEAVIDFGDDEDDVD-EGAYAAIRPKVSGLIQELRVHLADNRRGEIVRNGVRVAIAGPPNAGKSSLLNVLAERPAAIVSPIAGTTRDVVQLQLDIAGLPVVLSDTAGLRAAEAAADDVEREGIRRAREAVVDSQLTIFVWDSSNEAEGAAALKDLQATDEPADVGS------------------------------VILVSNKADLG----------------------TSATQQEPMQAMVQAG----------------------------------------------QPVWQLSCKTGEGVEAFLRHLEDEIARRYQTQQGQEDAPLITRARHRHHVQACLSALEGSMDPSLPMDLAAEELRYASAELGRITGAVDVEELLDVIFRDFCIGK 473
BLAST of mRNA_H-canaliculatus_F_contig1339.2755.1 vs. uniprot
Match: A0A4D9CTT5_9STRA (TrmE-type G domain-containing protein n=4 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CTT5_9STRA) HSP 1 Score: 439 bits (1130), Expect = 1.350e-138 Identity = 276/558 (49.46%), Postives = 334/558 (59.86%), Query Frame = 3
Query: 927 EEEAGPRLLPFPAARRAVVRRLYDPVTRDLLDEALVLWMPGPRSFTGEDTVELHTHGSRAVINGVLDALASMGMAGGDADAGEAMDVGG--RVRLAERGEFTQRAYGNGRMDLTGVEGLADLIAADTAAQRKQALKQMGGALRDMYEEWRHQLKGCLAHAEAVIDFGDDEEDVGGDAAFAAMMPRVESLATEIQKHLRDGGRGEIVRSGVRVAIVGPPNAGKSSLLNLLAARPAAIVSPVAGTTRDVVEVQMDIAGLPVTLSDTAGLREATDDEVEREGMRRARGAVDNAHLAIFVVDSTNADG--ATALLRQLREEAAAAAGQXXXTAAQRGDGDGYEGGVLGGSTGGAALDDLILVANKADLSIPDXXXXXXXXXXXXXXXXXXLTSLAAEAAAGALAPDGSAVAXXXXXXXXXXXXXXXXXXXXXXXXXEGAEIEGGGHRGRRQRPRPVWKISCKTKEGLDGFMGHLEAEVRSRF-QGATDDE---SPLITRRRHRQHVEACLLALRAAQRPR-MPLDLAAEELRIASSELGRITGAVGVEELLDVIFRDFCIGK 2573
+ +G PFPA R A +R+LY PV ++ LD+A+VLW+PGPRSFTGEDTVELH HGSRAV+ GV +AL A+D GG RVRLAE GEFT+RA+ NGRMDLT VEGLADLIAADTAAQRKQALKQMGGALR YE WR +LK CLAH EAVIDFGDDE DV +AA+ A+ PRV L+ E+++HL DGGRGE++R+G+RVAIVGPPNAGKS++LN LA RPAAIVSP AGTTRDVVEVQ+D+ GLPV +SDTAG+REA D VE+EG+RRAR A A L + V+D+ G A A L + A + T + +GG G +LV NK D E G G G + +S T EG++ + L+A + F + TDDE +P+ITR RHR HVE CL AL A+ + + LD+AAEELRIAS+ELGRITGAV VEE+LDVIFRDFCIGK
Sbjct: 2 DSHSGHSSAPFPAPRMASLRKLYSPVGQEALDQAIVLWLPGPRSFTGEDTVELHCHGSRAVVQGVTEALL-------------ALDKGGKARVRLAEPGEFTERAFANGRMDLTEVEGLADLIAADTAAQRKQALKQMGGALRQTYEGWREELKVCLAHTEAVIDFGDDELDVD-EAAYDAIRPRVRRLSEEMRRHLADGGRGEVIRAGIRVAIVGPPNAGKSTMLNTLARRPAAIVSPAAGTTRDVVEVQLDVGGLPVLVSDTAGIREAARDPVEQEGIRRAREAAGRAQLTVLVLDAAEVLGREAFASLAGVGPFLKDAPPEDLETVLR----------AVGGDAGA------LLVLNKRDT-------------------------------------------------------------VEGEHLLEQLRCAGAGKGG---TSTAAYLVSLSTGEGVEEMLAGLQARLEEVFDKDGTDDERAEAPVITRARHRVHVERCLEALTASMGEQGLGLDVAAEELRIASTELGRITGAVDVEEVLDVIFRDFCIGK 465
BLAST of mRNA_H-canaliculatus_F_contig1339.2755.1 vs. uniprot
Match: A0A0M0JVR3_9EUKA (tRNA modification gtpase n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JVR3_9EUKA) HSP 1 Score: 380 bits (977), Expect = 3.350e-116 Identity = 249/548 (45.44%), Postives = 313/548 (57.12%), Query Frame = 3
Query: 960 PAARRAVVRRLYDPVTRD-----LLDEALVLWMPGPRSFTGEDTVELHTHGSRAVINGVLDALASMGMAGGDADAGEAMDVGGRVRLAERGEFTQRAYGNGRMDLTGVEGLADLIAADTAAQRKQALKQMGGALRDMYEEWRHQLKGCLAHAEAVIDFGDDEEDVGGDAAFAAMMPRVESLATEIQKHLRDGGRGEIVRSGVRVAIVGPPNAGKSSLLNLLAARPAAIVSPVAGTTRDVVEVQMDIAGLPVTLSDTAGLREATDDEVEREGMRRARGAVDNAHLAIFVVDSTNADGATALLRQLREEAAAAAGQXXXTAAQRGDGDGYEGGVLGGSTGGAALDDLILVANKADLSIPDXXXXXXXXXXXXXXXXXXLTSLAAEAAAGALAPDGSAVAXXXXXXXXXXXXXXXXXXXXXXXXXEGAEIEGGGHRGRRQRPRPVWKISCKTKEGLDGFMGHLEAEVRSRFQGATDDESPLITRRRHRQHVEACLLALRAAQR-----PRMPLDLAAEELRIASSELGRITGAVGVEELLDVIFRDFCIGK 2573
P R+AV+R+L+ P + L+DE L LW P P SFTGEDTVELHTHGSRAV+ L+AL + +R+AE GEFT++A+ NGRM+LT VEGLADLI ADT QRKQAL+ MGGA R E WR +L LAH EA+IDFG+D +DV DA A+ +V L E++ L DGGRGE+VR GVRVAI+GPPNAGKSSLLN+LA RPAAIVSP+AGTTRDVV+V + + GLPV LSDTAGLRE+TDD +E++G+ R G A + ++V D+T+ A L + A AA AA G EG VLG A +LV NK DL T + A GA P +A R+R + +SC T EG+ F+ L + S++ GA+D E+ LITR RHR+H+ C AL A ++ PLDLAAEE+RIA++ELG+ITG + VEELLDVIFRDFCIGK
Sbjct: 10 PEPRKAVLRKLWAPEDDEGKRGGLIDEVLALWFPAPNSFTGEDTVELHTHGSRAVVAATLEALGRLE----------------GLRMAEPGEFTRQAFANGRMELTQVEGLADLINADTEEQRKQALRNMGGAQRSKLEGWRQELLSALAHTEALIDFGEDADDVTADALRGAVT-KVRVLRREVENQLSDGGRGEVVREGVRVAILGPPNAGKSSLLNMLAQRPAAIVSPIAGTTRDVVQVTLQLGGLPVLLSDTAGLRESTDDPIEQQGILRTLGEARRAQVQLWVYDATDPPTRAAQLDTVALGAGAARSAGVDGAADEALG---EGAVLGEDASSAVQ---LLVLNKLDL----------LHSPGLLHSPAEPTGTSGSAEMGAF-PWSPLLA--------------------------------------RERQ---YHLSCTTGEGVQPFLDALSQMIASKY-GASDREAALITRARHREHLRRCADALEAFEQYAGLGDSAPLDLAAEEIRIAANELGKITGRIDVEELLDVIFRDFCIGK 481
BLAST of mRNA_H-canaliculatus_F_contig1339.2755.1 vs. uniprot
Match: R1DA12_EMIHU (TrmE-type G domain-containing protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DA12_EMIHU) HSP 1 Score: 368 bits (944), Expect = 1.410e-110 Identity = 265/641 (41.34%), Postives = 328/641 (51.17%), Query Frame = 3
Query: 687 DTIFALATGNAGPAGVAVIRISGPRSAQVLEALTAGQGAAGASGGAVGVQSPQQQDAWISMGMDTAVDSALEAAARRVVKEEEAGPRLLPFPAARRAVVRRLYDPVTRD------LLDEALVLWMPGPRSFTGEDTVELHTHGSRAVINGVLDALASMGMAGGDADAGEAMDVGGRVRLAERGEFTQRAYGNGRMDLTGVEGLADLIAADTAAQRKQALKQMGGALRDMYEEWRHQLKGCLAHAEAVIDFGDDEEDVGGDAAFAAMMPRVESLATEIQKHLRDGGRGEIVRSGVRVAIVGPPNAGKSSLLNLLAARPAAIVSPVAGTTRDVVEVQMDIAGLPVTLSDTAGLREATDDEVEREGMRRARGAVDNAHLAIFVVDSTNADGATALLRQLREEAAAAAGQXXXTAAQRGDGDGYEGGVLGGSTGGAALDDL-ILVANKADLSIPDXXXXXXXXXXXXXXXXXXLTSLAAEAAAGALAPDGSAVAXXXXXXXXXXXXXXXXXXXXXXXXXEGAEIEGGGHRGRRQRPRPVWKISCKTKEGLDGFMGHLEAEVRSRFQGATDDESPLITRRRHRQHVEACLLALR-----AAQRPRMPLDLAAEELRIASSELGRITGAVGVEELLDVIFRDFCIGK 2573
DTIFAL++G AGV+VIR+SGP + VL+ + G G G G P RRAV+R L P + L+D+ALVLW+PGPRSFTGEDTVELHTHGS AV++ L+AL + RLAE GEFT++A+ NGRMDLT VE L DLI A T AQR+QAL MGG R E WR ++ LAH EA+IDFG+D +DV +AA ++ + + + EI+ L DGGRGE VR GVRVAI+GPPNAGKSSLLNLLA R AAIVSP+ GTTRDVV V + + G+PV LSDTAGLR ++D +ER GM R+ AH+ ++V D++ A DG G E +TGG A L +L+ NK DLS +G A EG + GG R+ W+ISC T EG+ F+ L VR R G+ + E+PL+TR RHRQH+E C+ AL A+ PLDLA EELR AS ELGRITG V VEE+LDVIFRDFCIGK
Sbjct: 70 DTIFALSSGAGVRAGVSVIRVSGPHAKLVLQRMCPGGG--GGDG----------------------------------------------LPPPRRAVLRSLRQPGSDTPPRHFPLVDQALVLWLPGPRSFTGEDTVELHTHGSPAVVSATLEALGRLSY----------------HRLAEPGEFTRQAHANGRMDLTEVEALGDLINAQTDAQRRQALAAMGGGQRRSLEAWRGRMVRALAHTEALIDFGEDADDVT-EAALSSAVGEMREIRREIEAELEDGGRGEAVRDGVRVAILGPPNAGKSSLLNLLARRDAAIVSPIEGTTRDVVTVSLQLGGMPVVLSDTAGLRSDSEDPIERLGMVRSADEAAKAHVQLWVFDASTPVPPDA------------------------DGVGAE------ATGGIAGAPLQLLLRNKVDLS---------------------------------RGGEGGA---------------------------EGGDTAGGVPSERQ------WRISCTTGEGVAPFLDQLGGIVR-RLYGSDEGETPLVTRARHRQHLEGCVAALAQFEELASLGEAAPLDLACEELRTASLELGRITGRVDVEEVLDVIFRDFCIGK 548
BLAST of mRNA_H-canaliculatus_F_contig1339.2755.1 vs. uniprot
Match: A0A8J5XZ82_DIALT (TrmE-type G domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XZ82_DIALT) HSP 1 Score: 368 bits (944), Expect = 2.080e-110 Identity = 264/638 (41.38%), Postives = 341/638 (53.45%), Query Frame = 3
Query: 687 DTIFALATGNAGPAGVAVIRISGPRSAQVLEALTAGQGAAGASGGAVGVQSPQQQDAWISMGMDTAVDSALEAAARRVVKEEEAGPRLLPFPAARRAVVRRLYDPVTRDLLDEALVLWMPGPRSFTGEDTVELHTHGSRAVINGVLDALASMGMAGGDADAGEAMDVGGRVRLAERGEFTQRAYGNGRMDLTGVEGLADLIAADTAAQRKQALKQMGGALRDMYEEWRHQLKGCLAHAEAVIDFGDDEEDVGGDAAFAAMMPRVESLATEIQKHLRDGGRGEIVRSGVRVAIVGPPNAGKSSLLNLLAARPAAIVSPVAGTTRDVVEVQMDIAGLPVTLSDTAGLREATD-DEVEREGMRRARGAVDNAHLAIFVVDST-----NADGATALLRQLREEAAAAAGQXXXTAAQRGDGDGYEGGVLGGSTGGAALDD--LILVANKADLSIPDXXXXXXXXXXXXXXXXXXLTSLAAEAAAGALAPDGSAVAXXXXXXXXXXXXXXXXXXXXXXXXXEGAEIEGGGHRGRRQRPRPVWKISCKTKEGLDGFMGHLEAEVRSRFQGATDDESPLITRRRHRQHVEACLLAL-RAAQRPRMPLDLAAEELRIASSELGRITGAVGVEELLDVIFRDFCIGK 2573
DTIFA+++G AGVAVIRISG + L+ + A G P AW+ A R A + +L P + + LD ALVLW P PRSFTGED ELH HG RAV+ VL AL ++ G RLAERGEFT+RA+GNGRMDLT VEGL+DL+AA+T AQR+QAL QMGGA R ++ WR Q+ CLAH EAVIDFG+D +D+G D + PRV LA ++ + L D RGE++R G RV IVG PNAGKSSLLN LA RPAAIV+P+AGTTRDV+E+++ + G P+ L DTAGLR + DE+E EGMRRAR + +A + + V D + + + ALLR EE A AAG+ + A GDGD G + LDD L++V NK D A A L+ G A P + ISC+T EG+D + LEA VR+ +G E+ ++TR RHR+H+E + AL R A+ + +DLAAEELRIA+SE+G++TG + VEE+LD+IFRDFCIGK
Sbjct: 67 DTIFAVSSGAGVRAGVAVIRISGAGARIALQTMIAR-----------GRLDPSL--AWL---------------------------------APRMATLAKLLAPGSDERLDSALVLWFPAPRSFTGEDVAELHVHGGRAVVAAVLAALGAL--------PGH--------RLAERGEFTRRAFGNGRMDLTEVEGLSDLLAANTDAQRRQALAQMGGAARARFDGWRAQILDCLAHTEAVIDFGEDADDLGSDV-LRVVSPRVAELAAQMTRALADARRGELLRDGPRVVIVGAPNAGKSSLLNRLAQRPAAIVTPIAGTTRDVLELELQLGGFPLRLCDTAGLRPRDEADEIEVEGMRRARALLADAPMRLVVADVSAGVPPSREELAALLRG--EEGADAAGEA--SGAALGDGD------EGANAAALDLDDSSLLVVLNKVD---------------------------ALPANRAPLSVHGIA-------------------------------------------PSCQFCISCETGEGMDALLDALEARVRALLEGEGGGETAIVTRARHREHLEQAVGALERFARLDGLMVDLAAEELRIAASEVGKVTGTIRVEEMLDIIFRDFCIGK 561
BLAST of mRNA_H-canaliculatus_F_contig1339.2755.1 vs. uniprot
Match: A0A2V3IXG2_9FLOR (tRNA modification GTPase GTPBP3, mitochondrial n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXG2_9FLOR) HSP 1 Score: 365 bits (938), Expect = 2.130e-109 Identity = 260/656 (39.63%), Postives = 332/656 (50.61%), Query Frame = 3
Query: 684 EDTIFALATGNAGPAGVAVIRISGPRSAQVLEALTAGQGAAGASGGAVGVQSPQQQDAWISMGMDTAVDSALEAAARRVVKEEEAGPRLLPFPAARRAVVRRLYDPVTRDLLDEALVLWMPGPRSFTGEDTVELHTHGSRAVINGVLDALASMGMAGGDADAGEAMDVGGRVRLAERGEFTQRAYGNGRMDLTGVEGLADLIAADTAAQRKQALKQMGGALRDMYEEWRHQLKGCLAHAEAVIDFGDDEEDVGGDAAFAAMMPRVESLATEIQKHLRDGGRGEIVRSGVRVAIVGPPNAGKSSLLNLLAARPAAIVSPVAGTTRDVVEVQMDIAGLPVTLSDTAGLREATDDEVEREGMRRARGAVDNAHLAIFVVDSTNADGATALLRQLREEAAAAAG--QXXXTAAQRGDGDGYEGGVLGGSTGGAALDDLILVANKADLSIPDXXXXXXXXXXXXXXXXXXLTSLAAEAAAGALAPDGSAVAXXXXXXXXXXXXXXXXXXXXXXXXXEGAEIEGGGHRGRRQRPRPVWKISCKTKEGLDGFMGHLEAEVRSRFQGA----------------TDDESPLITRRRHRQHVEACLLALRAAQRPR--------MPLDLAAEELRIASSELGRITGAVGVEELLDVIFRDFCIGK 2573
EDTIFAL++G AGVAVIR+SGP +A L ++A S +Q+ P R A +R+LY P++ +LLDEALVL+ PGP SFTGED VEL HGSRAVI+ V++ALA + D +R AERGEFT+RA+ NGR+DLT VEGLADLIAA+TA QRKQAL + G +++ EEWR ++K CLAH EAVIDFGDD +D F ++PRV++L +I+ HL D RGEI+R G RVAIVG PNAGKS+LLN LA RPAAIVSP AGTTRDVVEVQ+D+ GL V +SDTAGLR++T+D +E EG+RRAR A A + + V D T D TAL + L +A G A QR L+ V NK DL + +IE V+K S EG+ + HLE+ +R +G T + P+ITR RHR H++ + AL + + R +P+DLAAE+LRIA ELG ITG + EE+LDVIF +FCIGK
Sbjct: 79 EDTIFALSSGAGVTAGVAVIRVSGPHAADCLLKISA--------------PSTRQK-----------------------------------LPRPRYAALRKLYHPLSEELLDEALVLFFPGPNSFTGEDVVELQVHGSRAVISAVVNALA------------DCTDPDTMIRPAERGEFTRRAFENGRLDLTAVEGLADLIAAETAMQRKQALWHLSGHVKETLEEWRTEIKTCLAHVEAVIDFGDDVDD----QVFEDIIPRVQALRAQIKAHLDDAHRGEIIRGGARVAIVGKPNAGKSTLLNALAKRPAAIVSPHAGTTRDVVEVQLDLNGLAVVVSDTAGLRDSTNDPIEIEGIRRAREAAARADITVLVHDVTEGDLETAL-QALPSRLSACDGTQDPDDRADQR----------------------LVCVLNKVDL------------------------------------------------------------VNTSDQSSKDKDIE-------------VFKTSLLRNEGVSELVDHLESMIRVVCEGGETGGSSENTKNTNTKNTSELMPIITRARHRHHMKNAVAALDSFVQGRTGAIPSLYLPMDLAAEDLRIAGKELGAITGQIDSEEVLDVIFNEFCIGK 573
BLAST of mRNA_H-canaliculatus_F_contig1339.2755.1 vs. uniprot
Match: A0A7S4B1K1_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B1K1_CHRCT) HSP 1 Score: 364 bits (934), Expect = 4.120e-109 Identity = 266/649 (40.99%), Postives = 324/649 (49.92%), Query Frame = 3
Query: 687 DTIFALATGNAGPAGVAVIRISGPRSAQVLEALTAG-QGAAGASGGAVGVQSPQQQDAWISMGMDTAVDSALEAAARRVVKEEEAGPRLLPFPAARRAVVRRLYDPVTR--------------DLLDEALVLWMPGPRSFTGEDTVELHTHGSRAVINGVLDALASMGMAGGDADAGEAMDVGGRVRLAERGEFTQRAYGNGRMDLTGVEGLADLIAADTAAQRKQALKQMGGALRDMYEEWRHQLKGCLAHAEAVIDFGDDEEDVGGDAAFAAMMPRVESLATEIQKHLRDGGRGEIVRSGVRVAIVGPPNAGKSSLLNLLAARPAAIVSPVAGTTRDVVEVQMDIAGLPVTLSDTAGLREATDDEVEREGMRRARGAVDNAHLAIFVVDSTNADGATALLRQLREEAAAAAGQXXXTAAQRGDGDGYEGGVLGGSTGGAALDDLILVANKADLSIPDXXXXXXXXXXXXXXXXXXLTSLAAEAAAGALAPDGSAVAXXXXXXXXXXXXXXXXXXXXXXXXXEGAEIEGGGHRGRRQRPRPVWKISCKTKEGLDGFMGHLEAEVRSRFQGATDDESPLITRRRHRQHVEACLLALRAAQRPRM-----PLDLAAEELRIASSELGRITGAVGVEELLDVIFRDFCIGK 2573
+TIFAL++G G AGV+VIRISGP++ +VL + G QGAA P R+AV+RRL P +L+D+ALVLW PGPRSFTGED VELHTHGSRAV+ L AL S+ +RLAE GEFT++A+ NGRM LT VEGL DLI +DT QRKQAL QM G R ++E WR L G LAH EA+IDFG+D +DV +AA + + RV SL E+ LRDG RGE VR GVR+AI+GPPNAGKSSLLN LAAR AAIVSP AGTTRDVV + +++ GLPV +SDTAGLR T DE+ER+GM RA AHL ++V D+ + L A A A Q A + +L+ NK DL P+G+A A RQ W +SC T EG+ F+ L AE+ R GA + E L+TR RH QH+ AC+ AL A PLD+A EELR A +ELG+ITG V VEELLDVIFRDFCIGK
Sbjct: 64 ETIFALSSGG-GRAGVSVIRISGPQAREVLLQMAPGRQGAA-------------------------------------------------ELPPPRQAVLRRLRQPSEHGGGCGDRGGEGPPAELIDQALVLWFPGPRSFTGEDVVELHTHGSRAVVAATLGALNSIR----------------GLRLAEPGEFTRQAFSNGRMSLTEVEGLGDLINSDTEEQRKQALAQMEGVQRRVFEGWRETLLGSLAHTEALIDFGEDADDVT-EAALSGAVSRVRSLRAEMAARLRDGERGEAVRDGVRLAILGPPNAGKSSLLNALAARDAAIVSPTAGTTRDVVSLTLELGGLPVVVSDTAGLRAETADEIERQGMARAAKEAARAHLQLWVYDALAPPQSAEQLEAALASARAGAEQEPQQAEPQ----------------------KLLLLNKVDLL-----------------------------------PEGTASASAFFAAD-------------------------------RQ-----WGVSCLTGEGVQDFLTSL-AEIVKRQYGADEREPALVTRARHVQHLTACVKALDAFVELAQLGDGAPLDIATEELRTAVNELGKITGRVDVEELLDVIFRDFCIGK 551
BLAST of mRNA_H-canaliculatus_F_contig1339.2755.1 vs. uniprot
Match: A0A5J4YTG5_PORPP (tRNA modification GTPase GTPBP3, mitochondrial n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YTG5_PORPP) HSP 1 Score: 352 bits (902), Expect = 4.710e-105 Identity = 255/657 (38.81%), Postives = 336/657 (51.14%), Query Frame = 3
Query: 684 EDTIFALATGNAGPAGVAVIRISGPRSAQVLEALTAGQGAAGASGGAVGVQSPQQQDAWISMGMDTAVDSALEAAARRVVKEEEAGPRLLPFPAARRAVVRRLYDPVT--------------RDLLDEALVLWMPGPRSFTGEDTVELHTHGSRAVINGVLDALASMGMAGGDADAGEAMDVGGRVRLAERGEFTQRAYGNGRMDLTGVEGLADLIAADTAAQRKQALKQMGGALRDMYEEWRHQLKGCLAHAEAVIDFGDDEEDVGGDAAFAAMMPRVESLATEIQKHLRDGGRGEIVRSGVRVAIVGPPNAGKSSLLNLLAARPAAIVSPVAGTTRDVVEVQMDIAGLPVTLSDTAGLREATDDEVEREGMRRARGAVDNAHLAIFVVDSTNADGATALLRQLREEAAAAAGQXXXTAAQRGDGDGYEGGVLGGSTGGAALDDLILVANKADLSIPDXXXXXXXXXXXXXXXXXXLTSLAAEAAAGALAPDGSAVAXXXXXXXXXXXXXXXXXXXXXXXXXEGAEIEGGGHRGRRQRPRPVWKISCKTKEGLDGFMGHLEAEVR------SRFQGATDDESP--LITRRRHRQHVEACLLALRA-----AQRPRMPLDLAAEELRIASSELGRITGAVGVEELLDVIFRDFCIGK 2573
+DTIFAL++G + AGVAVIRISGP + VL L + Q V P + L P AR A +R+L+ ++ +++LD+ALVL PGPRSFTGED VELH HG AV++ V + L + M + +R AE+GEFT+RA+ N RMDLT VEGLADLI+A+T QR+ AL+QMGG LR +Y+ WR Q+ C+A+ EAVIDFGDD +D A AM P + L E+ H++D RGEIVRSGVRVAIVG PNAGKSSLLN LA RPAAIVS VAGTTRDV+EV +D+AG+ V LSDTAG+RE T+D +E+ G+ RA+ A+ +A L + VVD DGA+ +R + + + G ++ V NK DLS + + AA + G A +G+E+ W ISC T G+D F E VR S G D SP +ITR RHR HVE + +LR ++ +PLD+A EELR A+SELG+ITG + E++LD++F+DFCIGK
Sbjct: 12 QDTIFALSSGASQKAGVAVIRISGPHADVVLRHLLSAQD----------VSDPDPE---------------------------------LALPKARMASLRKLFGGISSTSVDAGAALVGNMKEILDQALVLRFPGPRSFTGEDVVELHVHGGLAVVSAVTNELMRLRM----------HPLAIPLRPAEKGEFTRRAFENDRMDLTEVEGLADLISAETTEQRRLALRQMGGNLRVLYDSWRAQIIKCMANVEAVIDFGDDVDD----DALDAMAPLLRDLEAELSAHVQDNRRGEIVRSGVRVAIVGAPNAGKSSLLNALAKRPAAIVSSVAGTTRDVIEVHLDVAGVAVILSDTAGIREETEDAIEQIGIERAKQALADADLVLHVVDVRQTDGAS--MRAFSDTQSDSVG-------------------------------VVTVFNKTDLSSEEER----------------------QVAAATMQQLGRA---------------------------KGSEL---------------W-ISCTTGAGMDAFQSAFETRVRELLWNNSSGTGHECDASPTAVITRARHRVHVENAIHSLRTFIHEFLEQNNLPLDIATEELRHAASELGQITGTIHTEDVLDIVFQDFCIGK 513 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1339.2755.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1339.2755.1 >prot_H-canaliculatus_F_contig1339.2755.1 ID=prot_H-canaliculatus_F_contig1339.2755.1|Name=mRNA_H-canaliculatus_F_contig1339.2755.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=831bp MLIRSYLVVSLLQLLLSLEGSDCFTTTYPVLPARTAATATTWTTRAVMRPback to top mRNA from alignment at H-canaliculatus_F_contig1339:14196..24310- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig1339.2755.1 ID=mRNA_H-canaliculatus_F_contig1339.2755.1|Name=mRNA_H-canaliculatus_F_contig1339.2755.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=10115bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1339:14196..24310- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1339:14196..24310- >mRNA_H-canaliculatus_F_contig1339.2755.1 ID=mRNA_H-canaliculatus_F_contig1339.2755.1|Name=mRNA_H-canaliculatus_F_contig1339.2755.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=4986bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1339:14196..24310- (Hapterophycus canaliculatus Oshoro5f female)back to top |