prot_H-canaliculatus_F_contig1339.2753.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1339.2753.1
Unique Nameprot_H-canaliculatus_F_contig1339.2753.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length158
Homology
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BLAST of mRNA_H-canaliculatus_F_contig1339.2753.1 vs. uniprot
Match: D8LG45_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LG45_ECTSI)

HSP 1 Score: 77.8 bits (190), Expect = 4.290e-14
Identity = 46/90 (51.11%), Postives = 56/90 (62.22%), Query Frame = 0 
Query:    1 MRWIFWVSTAVLVGVVSTGLSRNAGTKLVRVRPQEGCLRSYANVAG--SQEQQPQDLICCTERVDDEGDC-GMASYGVRTAQNKSLVCPP 87
            MR +F   TAVLV V   GLSRNAG+K VR R Q+GC R+YANVA   S+E+   DLICCT  V+D+G C G  S   +T  +K     P
Sbjct:    1 MRRMFLTFTAVLVAVACAGLSRNAGSKFVRTRVQQGCRRNYANVATARSREKPSLDLICCTGSVEDDGVCIGGGSRTTKTLTSKLAFVIP 90
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1339.2753.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LG45_ECTSI4.290e-1451.11Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..157
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..18
score: 0.729

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1339contigH-canaliculatus_F_contig1339:2018..5691 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1339.2753.1mRNA_H-canaliculatus_F_contig1339.2753.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1339 1966..5837 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1339.2753.1 ID=prot_H-canaliculatus_F_contig1339.2753.1|Name=mRNA_H-canaliculatus_F_contig1339.2753.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=158bp
MRWIFWVSTAVLVGVVSTGLSRNAGTKLVRVRPQEGCLRSYANVAGSQEQ
QPQDLICCTERVDDEGDCGMASYGVRTAQNKSLVCPPPGMRGGRRRRSSA
PILSQISMWKEVTPTARVLVFAKMFDLGSSRTMHRFRIRNPPRREGKSAV
KVACSSR*
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