prot_H-canaliculatus_F_contig1336.2735.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1336.2735.1
Unique Nameprot_H-canaliculatus_F_contig1336.2735.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length106
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1336.2735.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 1..106
e-value: 1.2E-30
score: 108.3
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 64..104
e-value: 6.6E-7
score: 29.0
NoneNo IPR availablePANTHERPTHR27004FAMILY NOT NAMEDcoord: 29..106
NoneNo IPR availablePANTHERPTHR27004:SF275coord: 29..106
NoneNo IPR availablePANTHERPTHR27004:SF275coord: 6..85
NoneNo IPR availablePANTHERPTHR27004FAMILY NOT NAMEDcoord: 6..85
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 2..106

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1336contigH-canaliculatus_F_contig1336:10081..26114 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1336.2735.1mRNA_H-canaliculatus_F_contig1336.2735.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1336 10081..26114 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1336.2735.1 ID=prot_H-canaliculatus_F_contig1336.2735.1|Name=mRNA_H-canaliculatus_F_contig1336.2735.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=106bp
MSDLPLAGSIPKELGALGALQKLVLEKKNLTGKGLIPAEVGELAALEYLN
LFGNQLSGPVPPTLGNLAVLKYLVLRHNRLSGTIPEELGKLTALELLSLS
SNNLSG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001611Leu-rich_rpt
IPR032675LRR_dom_sf