prot_H-canaliculatus_F_contig1336.2734.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-canaliculatus_F_contig1336.2734.1
Unique Name	prot_H-canaliculatus_F_contig1336.2734.1
Type	polypeptide
Organism	Hapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length	293

Homology

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BLAST of mRNA_H-canaliculatus_F_contig1336.2734.1 vs. uniprot
Match: D7G1K4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1K4_ECTSI)

HSP 1 Score: 148 bits (373), Expect = 7.840e-39
Identity = 138/294 (46.94%), Postives = 159/294 (54.08%), Query Frame = 0

Query:    1 GNRGSVVVLYIMAALVGILVSYMASGKRMDVGKASTTLIVRKVEGLWRLPFGGGVFEALCEGVGQCWRGLCRRCXXXXXXXSDRGQASSEETETPNFSNRKTYGHTAVATAAGEETRLILPPGVGDIEKPRRLRRPH-RGSSNGPPGG------RSSSVSSRGTAKDASDRYDNGEVSRPRARSDSDRSSGGYGDGSAAENGYAPPPGSPSAAAHLVSGEADRSSGVSGARITAYGSA-GXXXXXXXXXXXXXXXXXXXXXXXXXXXXFQILATSAVDAVAAAAKLAEEIAKDN 286
            G+R   V++YIMAALVGILVSY+ S           TLIVRKVEGLWRLPFGGGVFEALCEG  QCWRG  R  XXXXXXX      S  + + P+FS RK YG+T+   AAGE  RLI P   GD E+ RR RR   RG+S G          RSSS     T + AS  Y++ E SRPRARSDS  S G  GD    E  +    G+ S+A+        RS+G        YG+A G                             QIL TSAVDA AAAAKLAEEIA D+
Sbjct:   57 GSRKWTVIVYIMAALVGILVSYVTSA----------TLIVRKVEGLWRLPFGGGVFEALCEGAAQCWRGFRRXXXXXXXXXFRGDDGSPGDGQRPDFSERKLYGYTS---AAGEGRRLIFPT-RGDAEETRRGRRGRSRGTSRGXXXXXXXXXXRSSSP----TRRTASTFYEDEEASRPRARSDSSGSGGASGDFYDGERLFGAA-GAGSSASGRAXXXXXRSNG--------YGAADGRGVAPSAGGAGRELLRPVGTARRKRGGGVQILPTSAVDAAAAAAKLAEEIANDD 323

[Close]

BLAST of mRNA_H-canaliculatus_F_contig1336.2734.1 vs. uniprot
Match: A0A6H5KCH0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCH0_9PHAE)

HSP 1 Score: 124 bits (311), Expect = 3.130e-28
Identity = 82/132 (62.12%), Postives = 89/132 (67.42%), Query Frame = 0

Query:    1 GNRGSVVVLYIMAALVGILVSYMASGKRMDVGKASTTLIVRKVEGLWRLPFGGGVFEALCEGVGQCWRGLCRRCXXXXXXXSDRGQASSEETETPNFSNRKTYGHTAVATAAGEETRLILPPGVGDIEKPRR 132
            GNR   VV+YIMAALVGILVSY+AS           TLIVRKVEGLWRLPFGGGVF ALCEG  QCWRG  RRCXXXXXXX      S  + E P+FS  K YG+T+   AAGE  RLI P   GD E+ RR
Sbjct:  430 GNRKWTVVVYIMAALVGILVSYVASA----------TLIVRKVEGLWRLPFGGGVFGALCEGAAQCWRGFRRRCXXXXXXXFRGDDGSPGDDERPDFSEGKLYGYTS---AAGEGRRLIFPT-RGDAEETRR 547

The following BLAST results are available for this feature:

BLAST of mRNA_H-canaliculatus_F_contig1336.2734.1 vs. uniprot

BLAST of mRNA_H-canaliculatus_F_contig1336.2734.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7G1K4_ECTSI	7.840e-39	46.94	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KCH0_9PHAE	3.130e-28	62.12	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 6..24
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 25..292
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..5
None	No IPR available	TMHMM	TMhelix		coord: 7..26

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-canaliculatus_F_contig1336	contig	H-canaliculatus_F_contig1336:3292..5242 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female	2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90	2022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-canaliculatus_F_contig1336.2734.1	mRNA_H-canaliculatus_F_contig1336.2734.1	Hapterophycus canaliculatus Oshoro5f female	mRNA	H-canaliculatus_F_contig1336 3292..5242 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-canaliculatus_F_contig1336.2734.1 ID=prot_H-canaliculatus_F_contig1336.2734.1|Name=mRNA_H-canaliculatus_F_contig1336.2734.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=293bp
GNRGSVVVLYIMAALVGILVSYMASGKRMDVGKASTTLIVRKVEGLWRLP
FGGGVFEALCEGVGQCWRGLCRRCCCCCRCCSDRGQASSEETETPNFSNR
KTYGHTAVATAAGEETRLILPPGVGDIEKPRRLRRPHRGSSNGPPGGRSS
SVSSRGTAKDASDRYDNGEVSRPRARSDSDRSSGGYGDGSAAENGYAPPP
GSPSAAAHLVSGEADRSSGVSGARITAYGSAGGGGGAREVAPGQEQRRSA
TATKKRRGGGFQILATSAVDAVAAAAKLAEEIAKDNGDDGGK*