prot_H-canaliculatus_F_contig1333.2721.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1333.2721.1
Unique Nameprot_H-canaliculatus_F_contig1333.2721.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length172
Homology
BLAST of mRNA_H-canaliculatus_F_contig1333.2721.1 vs. uniprot
Match: D7G914_ECTSI (ER membrane protein complex subunit 10 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G914_ECTSI)

HSP 1 Score: 243 bits (619), Expect = 8.220e-79
Identity = 126/166 (75.90%), Postives = 144/166 (86.75%), Query Frame = 0
Query:    5 IQELIANDGLYLIRVSTGESSAQNVVAAIPACQLRLASFREEITLHVERDGLIVGVDYKAPVGPLASTRDCAKMPVPESYEVATKIVVVRAASAQSVPLQVLANSPPPGLANLKEQTSTKDEKASGSQSLLVRYWYIFVPCLLLYMFSASGPAEQGGQAAPTTSGG 170
            ++ELIANDGLYLIRV+T ESS Q+VVAA+ ACQLRLASFREEITLHVERDG+IVGVDYK+ VGPLASTR+C KMPV E  EV TK+VVVRAASAQSVPLQVL NSPPPGL+ LKEQ  TKD KA+G+QSLLV+YWYIF+PC+LL+MFSA    +QGG A P  +GG
Sbjct:   68 MEELIANDGLYLIRVATDESSNQHVVAAVSACQLRLASFREEITLHVERDGVIVGVDYKSLVGPLASTRNCTKMPVAEYSEVVTKVVVVRAASAQSVPLQVLQNSPPPGLSALKEQIGTKDAKAAGNQSLLVKYWYIFLPCVLLFMFSAP---DQGGAATPPAAGG 230          
BLAST of mRNA_H-canaliculatus_F_contig1333.2721.1 vs. uniprot
Match: A0A7S4D4Q0_HETAK (ER membrane protein complex subunit 10 (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D4Q0_HETAK)

HSP 1 Score: 95.1 bits (235), Expect = 1.130e-20
Identity = 56/117 (47.86%), Postives = 74/117 (63.25%), Query Frame = 0
Query:    5 IQELIANDGLYLIRVSTGESSAQN--VVAAIPACQLRLASFREEITLHVERDGLIVGVDYKAPVGPLASTRDCAKMPVPESYEVATKIVVVRAASAQSVPLQVLANSPPPGLANLKE 119
            I++LIAN G Y IR+ +  ++  +  V+AAI AC L  A+FREEI LH++    I+G+ Y AP   LA  RDC   P+PE  +  TKI V  A+  QSVPLQ  A  PPPGLA L++
Sbjct:  100 IKDLIANGGFYRIRLHSNPTNPDSPMVMAAISACDLHKANFREEIVLHLDPHQNIIGMTYSAPSSVLA--RDCHSKPLPEDIKFDTKIKVAEASIGQSVPLQAQAARPPPGLAGLQK 214          
BLAST of mRNA_H-canaliculatus_F_contig1333.2721.1 vs. uniprot
Match: A0A7S2V3X6_9STRA (ER membrane protein complex subunit 10 (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V3X6_9STRA)

HSP 1 Score: 87.0 bits (214), Expect = 5.540e-18
Identity = 68/192 (35.42%), Postives = 94/192 (48.96%), Query Frame = 0
Query:    5 IQELIANDGLYLIRVSTGESSAQNVVAAIPACQLRLASFREEITLHVERDGLI--------------------VGVDYKAPVGPLASTRD-------CAKMPVPESYEVATKIVVVRAASAQSVPLQVLANSPPPGLANL-KEQTSTKDEKASG-SQSLLVRYWYIFVPCLLLYMFS------ASGPAEQGG 161
            ++EL+ N G Y +R+  G   A  V A++ ACQL  ASFREEITL ++    +                    +G+ Y A   PLA+          C+   +P S E  T +       AQS+P+QV A SPPPG+A L K Q   +D K    +QS L +YWYI VP +LL++ +      A G   QGG
Sbjct:   27 LEELVRNGGYYRLRLRMGPD-APWVGASVSACQLHRASFREEITLQLDLVSPVAGGAXXXXXXXXXXXXXVEVLGLRYAAVPPPLATMLTTGAGALACSAAKLPSSVEFTTTLQSSLPTQAQSIPVQVTAGSPPPGVARLAKFQAQGEDGKGGQQNQSFLRKYWYIVVPLVLLFLMNPQQPEGAPGGGGQGG 217          
BLAST of mRNA_H-canaliculatus_F_contig1333.2721.1 vs. uniprot
Match: A0A7S3P5G2_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P5G2_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 3.920e-13
Identity = 51/170 (30.00%), Postives = 80/170 (47.06%), Query Frame = 0
Query:    7 ELIANDGLYLIR-VSTGESSAQNVVAAIPACQLRLASFREEITLHVERDGLIVGVDYKAPVGPLASTRDCAKMPVPESYEVATKIVVVRAASAQSVPLQVLANSPPPGLANLK---------------EQTSTKDEKA--SGSQSLLVRYWYIFVPCLLLYMFSASGPAE 158
            E++   G Y ++ V  G+++   V   IPAC LR A+FR+EITL   + G ++ + Y   + PLA  + C  +P P+  +  +K+    A    S+   +    PPPGL  +                E   TK+EK   +G      RYWYI +P  L+ M  A+ P +
Sbjct:   95 EVMMMSGWYQVKLVEDGKTATVPVKTTIPACHLRRANFRDEITLSFGQQGHVMSLAYSPLISPLAP-KTCDDLPAPQEIQFNSKVEYETAVPGMSLKTILPNYQPPPGLKFISSKHKSPGSVGGDAKPEGFGTKEEKELDTGIMGFFRRYWYIILPIFLMQMMGATEPEQ 263          
BLAST of mRNA_H-canaliculatus_F_contig1333.2721.1 vs. uniprot
Match: A0A7S3PTA5_9STRA (ER membrane protein complex subunit 10 n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PTA5_9STRA)

HSP 1 Score: 65.5 bits (158), Expect = 1.530e-9
Identity = 50/186 (26.88%), Postives = 94/186 (50.54%), Query Frame = 0
Query:    5 IQELIANDGLYLIRV--STGESSAQNVVAAIPACQLRLASFREEITLHVERDGLIVGVDYKAPVGPLASTRDCAK-MPVPESYEVATKIVVVRAASAQSVPLQ---------VLANSPPPGLANLKE-QTSTKD----EKASGSQSLLVRYWYIFVPCLLLYMFSASGPAEQG--GQAAPTTSGGR 171
            +++L+ N+ LY +R+     + S+  +VA+IPACQ+    F+E    H+++ G I   +  +       +R+C++ +  P+S  + +K V      A   P +          +AN PP     ++E +  +KD    E+ + +QS + +YWY+F+P LL+ +F  S   + G  GQ     +GG+
Sbjct:  103 MKKLVENNRLYRVRIPLKPDDPSSPWLVASIPACQMLENDFKESFRFHLDKSGTITSFELSSKT----PSRECSQGLSFPKSVVLKSKAVASIPKEAHGAPKRGGLNDSKGAKVANMPPELQGVIEENKPKSKDGKEAEEEAENQSFVRKYWYLFLPMLLMSVFGGSPEPQAGAAGQGRSPPAGGQ 284          
BLAST of mRNA_H-canaliculatus_F_contig1333.2721.1 vs. uniprot
Match: A0A7S2S2Z1_9STRA (ER membrane protein complex subunit 10 n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2S2Z1_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 1.350e-8
Identity = 45/162 (27.78%), Postives = 79/162 (48.77%), Query Frame = 0
Query:    8 LIANDGLYLIRVSTGESSAQNVVAAIPACQLRLASFREEITLHVERDGLIVGVDYKAPVGPLASTRDC--AKMPVPESYEVATKIVVVRAASAQSVPLQVLANSPPPG-----LANLKEQTSTKD--EKASGSQSLLVRYWYIFVPCLLLYMFSASGPAEQG 160
            L+ N+G Y +R+ +    +  + A+IPAC L    FRE +  H++++  ++G D+     P+  TR C  +K    +S ++ +K         Q VP   +    P G     +A   E+++  D  EK       L +YWY+F+P +L+ +    GP E+G
Sbjct:   83 LLKNNGFYRVRIRSQFGDSW-LTASIPACVLAAGHFRENLRFHIDKNAALIGFDHI----PVVKTRGCDASKYLGLDSIKLVSKGSASLPQEGQHVPKNAIPVGIPQGSAGANVAQTMEKSAGGDSGEKQEEEPHFLRKYWYVFLPLVLISVLGP-GPPEEG 238          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1333.2721.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7G914_ECTSI8.220e-7975.90ER membrane protein complex subunit 10 n=1 Tax=Ect... [more]
A0A7S4D4Q0_HETAK1.130e-2047.86ER membrane protein complex subunit 10 (Fragment) ... [more]
A0A7S2V3X6_9STRA5.540e-1835.42ER membrane protein complex subunit 10 (Fragment) ... [more]
A0A7S3P5G2_9STRA3.920e-1330.00Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A7S3PTA5_9STRA1.530e-926.88ER membrane protein complex subunit 10 n=1 Tax=Apl... [more]
A0A7S2S2Z1_9STRA1.350e-827.78ER membrane protein complex subunit 10 n=1 Tax=lab... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR21397NUCLEIC ACID BINGING PROTEINcoord: 5..169
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 152..171
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 134..151
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..133
NoneNo IPR availableTMHMMTMhelixcoord: 134..153
IPR029615ER membrane protein complex subunit 10PANTHERPTHR21397:SF4ER MEMBRANE PROTEIN COMPLEX SUBUNIT 10coord: 5..169

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1333contigH-canaliculatus_F_contig1333:2374..5229 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1333.2721.1mRNA_H-canaliculatus_F_contig1333.2721.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1333 2007..5229 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1333.2721.1 ID=prot_H-canaliculatus_F_contig1333.2721.1|Name=mRNA_H-canaliculatus_F_contig1333.2721.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=172bp
MNRHIQELIANDGLYLIRVSTGESSAQNVVAAIPACQLRLASFREEITLH
VERDGLIVGVDYKAPVGPLASTRDCAKMPVPESYEVATKIVVVRAASAQS
VPLQVLANSPPPGLANLKEQTSTKDEKASGSQSLLVRYWYIFVPCLLLYM
FSASGPAEQGGQAAPTTSGGR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029615Emc10