mRNA_H-canaliculatus_F_contig13329.2720.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig13329.2720.1 vs. uniprot
Match: A0A6H5KLK8_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLK8_9PHAE) HSP 1 Score: 201 bits (512), Expect = 8.940e-61 Identity = 106/115 (92.17%), Postives = 106/115 (92.17%), Query Frame = 1
Query: 22 HESGFGMPQRTNEPPAEFDHAITYVTTIKKRFSHEPQTYKAFLEILHTYQKEQRGIKDVLEQVSSLFADHPDLLREFTYFLPDPVQEQARERLNRAARESEMRKAKAAKEAAQHR 366
HESGFGMP R NEPPAEFDHAITYVTTIKKRFSHEPQTYKAFLEILHTYQKEQRG VSSLFADHPDLLREFTYFLPDPVQEQARERLNRAARESEMRKAKAAKEAAQHR
Sbjct: 269 HESGFGMPHRANEPPAEFDHAITYVTTIKKRFSHEPQTYKAFLEILHTYQKEQRGA------VSSLFADHPDLLREFTYFLPDPVQEQARERLNRAARESEMRKAKAAKEAAQHR 377
BLAST of mRNA_H-canaliculatus_F_contig13329.2720.1 vs. uniprot
Match: A0A7S3Y2Z2_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y2Z2_HETAK) HSP 1 Score: 159 bits (403), Expect = 4.140e-47 Identity = 80/94 (85.11%), Postives = 86/94 (91.49%), Query Frame = 1
Query: 58 EPPAEFDHAITYVTTIKKRFSHEPQTYKAFLEILHTYQKEQRGIKDVLEQVSSLFADHPDLLREFTYFLPDPVQEQARERLNRAARESEMRKAK 339
+PP EFDHAI+YVTTIK+RF EP YKAFLEILHTYQKEQRGIKDVLEQVS+LFADHPDLL+EFTYFLPD VQ QA+ERLNRAA ESEMRKAK
Sbjct: 75 QPPVEFDHAISYVTTIKRRFQSEPAIYKAFLEILHTYQKEQRGIKDVLEQVSALFADHPDLLKEFTYFLPDAVQVQAKERLNRAAHESEMRKAK 168
BLAST of mRNA_H-canaliculatus_F_contig13329.2720.1 vs. uniprot
Match: A0A835ZD67_9STRA (HDAC_interact domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD67_9STRA) HSP 1 Score: 169 bits (427), Expect = 9.490e-46 Identity = 86/95 (90.53%), Postives = 91/95 (95.79%), Query Frame = 1
Query: 58 EPPAEFDHAITYVTTIKKRFSHEPQTYKAFLEILHTYQKEQRGIKDVLEQVSSLFADHPDLLREFTYFLPDPVQEQARERLNRAARESEMRKAKA 342
E PAEFDHAI+YVTTIKKRFS EPQTYKAFLEILHTYQKEQRGIKDVLEQVSSLFADHPDLLREFTYFLPDPVQ+QARERLNRAA+ESE R+ +A
Sbjct: 292 EQPAEFDHAISYVTTIKKRFSTEPQTYKAFLEILHTYQKEQRGIKDVLEQVSSLFADHPDLLREFTYFLPDPVQDQARERLNRAAQESEERRRRA 386
BLAST of mRNA_H-canaliculatus_F_contig13329.2720.1 vs. uniprot
Match: A0A7S1XK99_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XK99_9STRA) HSP 1 Score: 150 bits (379), Expect = 6.610e-44 Identity = 75/101 (74.26%), Postives = 85/101 (84.16%), Query Frame = 1
Query: 28 SGFGMPQRTNEPPAEFDHAITYVTTIKKRFSHEPQTYKAFLEILHTYQKEQRGIKDVLEQVSSLFADHPDLLREFTYFLPDPVQEQARERLNRAARESEMR 330
+G G + N P EFDHAI YVTTIKKRFS +P TYK FLEILHTYQKEQR IK+VL+QVS LFA+HPDLL+EFTYFLPD VQEQA+ERL RAA+E+EMR
Sbjct: 11 AGDGNAAKGNGQPVEFDHAINYVTTIKKRFSEDPDTYKTFLEILHTYQKEQRSIKEVLDQVSELFAEHPDLLKEFTYFLPDAVQEQAKERLQRAAQEAEMR 111
BLAST of mRNA_H-canaliculatus_F_contig13329.2720.1 vs. uniprot
Match: A0A7S1XJY5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XJY5_9STRA) HSP 1 Score: 149 bits (375), Expect = 2.370e-43 Identity = 74/102 (72.55%), Postives = 86/102 (84.31%), Query Frame = 1
Query: 28 SGFGMPQRTNEPPAEFDHAITYVTTIKKRFSHEPQTYKAFLEILHTYQKEQRGIKDVLEQVSSLFADHPDLLREFTYFLPDPVQEQARERLNRAARESEMRK 333
+G G + N P EFDHAI YVTTIKKRFS +P TYK FLEILHTYQ+EQRGIK VL+QVS LF DHPDLL+EFTYFLPD VQ+QA+ERL+RAA+++EMRK
Sbjct: 11 AGDGNAAKGNGQPVEFDHAINYVTTIKKRFSEDPDTYKTFLEILHTYQREQRGIKMVLDQVSELFRDHPDLLKEFTYFLPDAVQDQAKERLHRAAQQAEMRK 112
BLAST of mRNA_H-canaliculatus_F_contig13329.2720.1 vs. uniprot
Match: A0A7S4E9C3_9STRA (Hypothetical protein n=8 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E9C3_9STRA) HSP 1 Score: 159 bits (402), Expect = 2.060e-42 Identity = 79/90 (87.78%), Postives = 85/90 (94.44%), Query Frame = 1
Query: 64 PAEFDHAITYVTTIKKRFSHEPQTYKAFLEILHTYQKEQRGIKDVLEQVSSLFADHPDLLREFTYFLPDPVQEQARERLNRAARESEMRK 333
P EFDHAITYVTTIKKRF+HEP+TYKAFLEILHTYQKEQR IKDVLEQVS LFADH DLL+EFTYFLPD VQEQA+ERL+RAARESEMR+
Sbjct: 137 PVEFDHAITYVTTIKKRFAHEPETYKAFLEILHTYQKEQRSIKDVLEQVSQLFADHSDLLKEFTYFLPDAVQEQAKERLSRAARESEMRR 226
BLAST of mRNA_H-canaliculatus_F_contig13329.2720.1 vs. uniprot
Match: A0A7S2CK77_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CK77_9STRA) HSP 1 Score: 144 bits (363), Expect = 5.370e-42 Identity = 75/102 (73.53%), Postives = 82/102 (80.39%), Query Frame = 1
Query: 37 GMPQRTNEPPAEFDHAITYVTTIKKRFSHEPQTYKAFLEILHTYQKEQRGIKDVLEQVSSLFADHPDLLREFTYFLPDPVQEQARERLNRAARESEMRKAKA 342
G R + P EFD AI YVT IKKRF H+ TYKAFLEILHTYQ+EQ+GIK+VLEQVS LFADH DLL EFTYFLPD VQEQA ERL+RA RESEMR+A A
Sbjct: 2 GAAGRQSGQPVEFDRAINYVTKIKKRFDHDQDTYKAFLEILHTYQREQKGIKEVLEQVSGLFADHEDLLTEFTYFLPDAVQEQATERLHRAVRESEMRRAAA 103
BLAST of mRNA_H-canaliculatus_F_contig13329.2720.1 vs. uniprot
Match: A0A7R9ZHJ2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZHJ2_9STRA) HSP 1 Score: 145 bits (366), Expect = 2.880e-40 Identity = 72/89 (80.90%), Postives = 82/89 (92.13%), Query Frame = 1
Query: 70 EFDHAITYVTTIKKRFSHEPQTYKAFLEILHTYQKEQRGIKDVLEQVSSLFADHPDLLREFTYFLPDPVQEQARERLNRAARESEMRKA 336
EFDHAITYVTTIKKRF+++P+TY+ FLEILHTYQKEQRGIK+VLEQVSSLFADHPDLL+EFT+FLPD VQEQA+ERL RAA E+ R A
Sbjct: 121 EFDHAITYVTTIKKRFANDPRTYQTFLEILHTYQKEQRGIKEVLEQVSSLFADHPDLLKEFTFFLPDAVQEQAKERLQRAAEEAHARHA 209
BLAST of mRNA_H-canaliculatus_F_contig13329.2720.1 vs. uniprot
Match: A0A7S1USX6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1USX6_9STRA) HSP 1 Score: 140 bits (353), Expect = 2.400e-39 Identity = 71/96 (73.96%), Postives = 82/96 (85.42%), Query Frame = 1
Query: 43 PQRTNEP--PAEFDHAITYVTTIKKRFSHEPQTYKAFLEILHTYQKEQRGIKDVLEQVSSLFADHPDLLREFTYFLPDPVQEQARERLNRAARESE 324
PQ+ P EFDHAI+YVT IKKRF+ +P TY FLEILHTYQKEQRGIK+VLEQV++LFADHPDLL+EFT+FLPD VQEQA+ERL+RAA ESE
Sbjct: 102 PQQPQPPGTAVEFDHAISYVTNIKKRFADDPATYHTFLEILHTYQKEQRGIKEVLEQVAALFADHPDLLKEFTFFLPDAVQEQAKERLHRAAAESE 197
BLAST of mRNA_H-canaliculatus_F_contig13329.2720.1 vs. uniprot
Match: A0A397A634_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397A634_9STRA) HSP 1 Score: 143 bits (361), Expect = 1.370e-38 Identity = 71/92 (77.17%), Postives = 82/92 (89.13%), Query Frame = 1
Query: 64 PAEFDHAITYVTTIKKRFSHEPQTYKAFLEILHTYQKEQRGIKDVLEQVSSLFADHPDLLREFTYFLPDPVQEQARERLNRAARESEMRKAK 339
P EFDHAI YVTTIKKRF+ EP+TYKAFLEILHTYQKEQ IK VL+QVS LF DHPDLLREFT+FLPD VQEQA+ERLN+AA ++++R+AK
Sbjct: 162 PVEFDHAILYVTTIKKRFADEPETYKAFLEILHTYQKEQGSIKQVLDQVSFLFRDHPDLLREFTFFLPDAVQEQAKERLNKAAEKAQLRQAK 253 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig13329.2720.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig13329.2720.1 >prot_H-canaliculatus_F_contig13329.2720.1 ID=prot_H-canaliculatus_F_contig13329.2720.1|Name=mRNA_H-canaliculatus_F_contig13329.2720.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=147bp GGGGGGGHESGFGMPQRTNEPPAEFDHAITYVTTIKKRFSHEPQTYKAFLback to top mRNA from alignment at H-canaliculatus_F_contig13329:313..3125- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig13329.2720.1 ID=mRNA_H-canaliculatus_F_contig13329.2720.1|Name=mRNA_H-canaliculatus_F_contig13329.2720.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=2813bp|location=Sequence derived from alignment at H-canaliculatus_F_contig13329:313..3125- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig13329:313..3125- >mRNA_H-canaliculatus_F_contig13329.2720.1 ID=mRNA_H-canaliculatus_F_contig13329.2720.1|Name=mRNA_H-canaliculatus_F_contig13329.2720.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=882bp|location=Sequence derived from alignment at H-canaliculatus_F_contig13329:313..3125- (Hapterophycus canaliculatus Oshoro5f female)back to top |