prot_H-canaliculatus_F_contig1332.2713.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1332.2713.1
Unique Nameprot_H-canaliculatus_F_contig1332.2713.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length518
Homology
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BLAST of mRNA_H-canaliculatus_F_contig1332.2713.1 vs. uniprot
Match: A0A6H5KQR5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQR5_9PHAE)

HSP 1 Score: 107 bits (267), Expect = 8.520e-21
Identity = 111/165 (67.27%), Postives = 124/165 (75.15%), Query Frame = 0 
Query:  326 DAAVASVPD-PFRTPTPTAVAATPFWGEPGESPTKQQRNSTVGVVTKNPRQQQXXXXXXXXXXXXXXXXXPQCLFRGCSRRSTHAAPGEKPTYCAEHRIAGMSNAVASSAVTPSGGVSKRNRXXXXXXXXXXXXXXXXXXXXXXXXXKMDNYVDVKHPRCESELG 489
            +AA+A+VP+ P+RTPT  A AATPFWGEP ESP KQ                  XXXXXXXXXXXXXXXX  C+F GCSRR+THAA GE+P +C+EHR+ GM++  A    TP G  SKRNRXXXXXXXXXXXXXXXXXXXXXXXXX  DNYVDVKHPRCESELG
Sbjct:  280 EAAIAAVPEEPYRTPT-RAAAATPFWGEPDESPIKQXXXXXXXXXXXXXX----XXXXXXXXXXXXXXXXXXCMFGGCSRRATHAARGERPGHCSEHRLPGMADTTA--VATPGG--SKRNRXXXXXXXXXXXXXXXXXXXXXXXXXXXDNYVDVKHPRCESELG 435
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1332.2713.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KQR5_9PHAE8.520e-2167.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 374..394

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1332contigH-canaliculatus_F_contig1332:763..3717 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1332.2713.1mRNA_H-canaliculatus_F_contig1332.2713.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1332 763..3717 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1332.2713.1 ID=prot_H-canaliculatus_F_contig1332.2713.1|Name=mRNA_H-canaliculatus_F_contig1332.2713.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=518bp
SSSSGGGGGWWPTRSTTLAQSSVHTEATRLGGGNIGSSGSSNMSVSVPDA
ISDNDLAYPSRTQQSTAAILSGGSQRQQHERKPWLKPVASLLRGIPQPKL
QRDWSDGGGGVVPVGRFTPANPAAAATPAVHMVPQQDGQLFSHLGWRGNN
AAGGTTTAAVVESGGANNTSSEKYARFERQPHHHHLQQQHKQLHVLALGQ
DRSRSVSPRIVRGPLGGAVSPGRSRPQQQQQQQQPLSSPSNRRRDDLRAA
RNSGMHHRSNSLHDHAEEARRLSAHNDVPWRLGGGFHDNGGDARRQSYFD
RPSPYQQHRRQRHQRGGHFFPTAAADAAVASVPDPFRTPTPTAVAATPFW
GEPGESPTKQQRNSTVGVVTKNPRQQQRQQQQQEKQQQQEKQQQPQCLFR
GCSRRSTHAAPGEKPTYCAEHRIAGMSNAVASSAVTPSGGVSKRNRCLMP
GCSKPPRYALPGHKAEYCTLHKMDNYVDVKHPRCESELGCVRQPTFGWEG
EKARFCSAHKIENMLDVK
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