mRNA_H-canaliculatus_F_contig100.26.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig100.26.1
Unique NamemRNA_H-canaliculatus_F_contig100.26.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
[Close]
BLAST of mRNA_H-canaliculatus_F_contig100.26.1 vs. uniprot
Match: D7FQ39_ECTSI (CRAL-TRIO domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ39_ECTSI)

HSP 1 Score: 368 bits (944), Expect = 6.280e-119
Identity = 178/210 (84.76%), Postives = 193/210 (91.90%), Query Frame = 3 
Query:  417 LLRYLEMAYWTMETMGQALPDAVASTIRWREGAGPHLVTDHQVAEEAMYGKMYVRGHDREGRPIIHYRPGLEKSFDTEKGLNLLFYTLERAKTMLPKGQTQFAVLADCSGFGPSKTPPLPMLKTAFITMQRHYPMRLGYVMIANAGGPIVFVWKLISAVLDERTKDKIFFVSKREAEAKLTGLISPSDLPASLPGGLDKFSYSNEEYLSL 1046
            ++RYLEMAYWTME+MGQ LPDAVAST+RWRE A PHL+TD+QVAEEA YGKMYVRG DR+ RPIIHYRPGLEKSFDTEKGLNLLF+TLERAK  LPKGQTQFAV+ADCSGFGPSKTPPLPMLKTAFITMQRHYPMRLGYV+I NAGGPI FVWKLIS VL+ERTK+KI F+SK+EAEA LTGLI PS LPASLPGGLD F+YSNEEYL L
Sbjct:    1 MMRYLEMAYWTMESMGQPLPDAVASTVRWREDATPHLLTDNQVAEEAKYGKMYVRGLDRQQRPIIHYRPGLEKSFDTEKGLNLLFHTLERAKGSLPKGQTQFAVVADCSGFGPSKTPPLPMLKTAFITMQRHYPMRLGYVVIVNAGGPITFVWKLISTVLEERTKEKIAFLSKKEAEATLTGLIDPSALPASLPGGLDDFTYSNEEYLKL 210
[Close]
BLAST of mRNA_H-canaliculatus_F_contig100.26.1 vs. uniprot
Match: A0A6H5JFY3_9PHAE (CRAL-TRIO domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFY3_9PHAE)

HSP 1 Score: 228 bits (580), Expect = 1.530e-66
Identity = 112/135 (82.96%), Postives = 122/135 (90.37%), Query Frame = 3 
Query:  642 DTEKGLNLLFYTLERAKTMLPKGQTQFAVLADCSGFGPSKTPPLPMLKTAFITMQRHYPMRLGYVMIANAGGPIVFVWKLISAVLDERTKDKIFFVSKREAEAKLTGLISPSDLPASLPGGLDKFSYSNEEYLSL 1046
            D  +GLNLLF+TLERAK  LPKGQTQFAV+ADCSGFGPSKTPPLPMLKTAFITMQRHYPMRLGYV+I NAGGPI FVWKLIS VL+ERTK+KI F+SK+EAEA LTGLI PS LPASLPGGLD F+YSN+EYL L
Sbjct:   15 DILEGLNLLFHTLERAKGSLPKGQTQFAVVADCSGFGPSKTPPLPMLKTAFITMQRHYPMRLGYVVIVNAGGPITFVWKLISTVLEERTKEKIAFLSKKEAEATLTGLIDPSALPASLPGGLDDFTYSNKEYLKL 149
[Close]
BLAST of mRNA_H-canaliculatus_F_contig100.26.1 vs. uniprot
Match: A0A835Z968_9STRA (CRAL-TRIO domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z968_9STRA)

HSP 1 Score: 163 bits (413), Expect = 1.830e-40
Identity = 112/336 (33.33%), Postives = 163/336 (48.51%), Query Frame = 3 
Query:  150 PMATTREEDGTKRKRRALQALWRRVTEKLGGGSGSRYWEKRGRKVGGDGEAEPWKAIMLAELRGQLEEQYGHTLWTRAKAVRHELEDGLLLRYLEMAYWTMETMGQALP---DAVASTIRWREGAGPHLVTDHQVAEEAMYGKMYVRGHDREGRPIIHYRPGLEKS-FDTEKGLNLLFYTLERAKTMLPKGQTQFAVLADCSGFGPSKTPPLPMLK-----------------------------------TAFITMQRHYPMRLGYVMIANAGGPIVFVWKLISAVLDERTKDKIFFVSKREAEAKLTGLISPSDLPASLPGGLDKFSYSNEEYL 1040
            P   T  E  +KR R+  +  +  +  KL G S        G  + G  +    K   L +L+ +++ +    L   A+ V+HEL +  LLR+LE++YW +E  G A P   D +A T+ WR+  G   +    V   A  GK+YVRG DR+GRP+IH+RP  E + FD      L+ YTLERA   +P GQ++FAV+ DC+GF     PP+  +K                                    +   M  HYPMRLGYV I NAG  + F WK+I+++L ERT  KI F+        L   + P  LP ++ G  D ++Y  ++YL
Sbjct:   40 PAERTAAEPPSKRDRKLWKLNFSAMKRKLLGRSAKAPGADGGVLLYGYYQMNDQKWAALRQLKEEVDAR--PELRRHAREVQHELTELTLLRFLEVSYWRVEKDGDAGPRLVDVIARTVEWRDQMGAVAMAPAAVRAPAAAGKLYVRGADRQGRPVIHFRPAREHAPFDVAANTRLVVYTLERALRAMPPGQSRFAVVVDCAGFTLGNFPPVAYIKEEXXXXXXXXXXXXXXXXXXXXXXEARLAVTGALDASLGVMMNHYPMRLGYVRIVNAGRGLNFFWKIIASMLQERTTKKISFLGGPATCDALLSELPPQALPDTICG-TDTWTYDVDQYL 372
[Close]
BLAST of mRNA_H-canaliculatus_F_contig100.26.1 vs. uniprot
Match: D8LQH2_ECTSI (CRAL-TRIO domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQH2_ECTSI)

HSP 1 Score: 157 bits (396), Expect = 8.700e-38
Identity = 82/241 (34.02%), Postives = 128/241 (53.11%), Query Frame = 3 
Query:  321 MLAELRGQLEEQYGHTLWTRAKAVRHELEDGLLLRYLEMAYWTMETMGQALPDAVASTIRWREGAGPHLVTDHQVAEEAMYGKMYVRGHDREGRPIIHYRPGLEKSFDTEKGLNLLFYTLERAKTMLPKGQTQFAVLADCSGFGPSKTPPLPMLKTAFITMQRHYPMRLGYVMIANAGGPIVFVWKLISAVLDERTKDKIFFVSKREAEAKLTGLISPSDLPASLPGGLDKFSYSNEEYLS 1043
            +L ELR ++  + G  L  RAK V HEL+     R+LE A+W +E  G+ + D +  +I WRE  G   +    V ++   G + V+GHD   RP++++RP L+   + +    L+ Y LERA  ++P+   Q+ ++ DC G G  + PP+  +K  F  +  HYPMRLG+V+  N G  ++  WK++S +L  RTK K+  +    A  +    I PS L  S  GG   + Y    Y S
Sbjct:  175 VLQELRNEVAAKPG--LERRAKKVHHELDTVAFGRFLEAAFWALEHDGKRVSDFIEESIAWREKIGADRLRKEDVVDQGCRGAIIVKGHDLSRRPVVYFRPALDGRMEGDGNSKLMIYNLERAIRLMPRNSWQYTIVIDCEGMGLKQLPPVTYMKKMFKLLSHHYPMRLGHVLFTNVGPSVMLCWKVVSPLLQARTKAKMHLIPST-ALGQTAKYIHPSQL-LSFAGGKSTWQYDPAVYFS 411
[Close]
BLAST of mRNA_H-canaliculatus_F_contig100.26.1 vs. uniprot
Match: A0A835ZL56_9STRA (CRAL-TRIO domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZL56_9STRA)

HSP 1 Score: 146 bits (369), Expect = 3.500e-36
Identity = 78/226 (34.51%), Postives = 119/226 (52.65%), Query Frame = 3 
Query:  414 LLLRYLEMAYWTMETMGQALPDAVASTIRWREGAGPHLVTDHQVAEEAM-------------YGKMYVRGHDREGRPIIHYRPG--LEKSFDTEKGLNLLFYTLERAKTMLPKGQTQFAVLADCSGFGPSKTPPLPMLKTAFITMQRHYPMRLGYVMIANAGGPIVFVWKLISAVLDERTKDKIFFVSKREAEAKLTG-LISPSDLPASLPGGLDKFSYSNEEYLS 1043
            +L+R++E A+W +E  G  +   +  T+ WRE  G H +T   +   A               G + V G DR+GRPI+H R G    K +  E+ L    YT+ERA     +G   + ++ADC GFG +  PPLP L+  F  + RHYPMRLG++++ NA   +   W++ S ++  RTKDKI F   RE +  L    ++P++LP +L GG   + Y    Y +
Sbjct:    1 MLVRFIEGAFWNLEHKGVPVSALIEETVAWRESVGAHAITPASLGARARGRDIVGPLAPALRAGAIVVHGRDRDGRPIMHVRLGALFGKGYSAEQCLRYAVYTVERAWRARARGVEAYTIVADCRGFGLTHLPPLPFLRAMFGMLSRHYPMRLGHILLCNASASVHLCWRVCSPIVPPRTKDKIVFA--REGDRALVARYVAPAELPRAL-GGASAYEYDAARYFA 223
[Close]
BLAST of mRNA_H-canaliculatus_F_contig100.26.1 vs. uniprot
Match: A0A7S2XX21_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XX21_9STRA)

HSP 1 Score: 138 bits (347), Expect = 6.300e-34
Identity = 70/164 (42.68%), Postives = 102/164 (62.20%), Query Frame = 3 
Query:  525 LVTDHQVAEEAMYGKMYVRGHDREGRPIIHYRPGLEKSFDTEKGLNLLFYTLERA-KTMLPK-GQTQFAVLADCSGFGPSKTPPLPMLKTAFITMQRHYPMRLGYVMIANAGGPIVFVWKLISAVLDERTKDKIFFVSKREAEAKLTGLISPSDLPASLPGGLD 1010
            +  D  +  EA  GKMY  G  R G P++++RP LE   D E  L+LL YTLERA K+M  K G  +F VL DC+GFG S+ PP+ ++   F T+  +YPMRLG V + NAG P+  +WK++S +L+ERT+ K+FF+S++E    +   ++P  L     G L+
Sbjct:    8 MKVDAGMRREAAGGKMYTLGRGRSGEPLVYFRPALETGSDYEASLHLLVYTLERAIKSMDSKRGVEKFIVLVDCTGFGLSRAPPISLVTGQFKTLMHNYPMRLGKVFVVNAGTPMNMLWKIVSPILNERTRHKVFFLSEKEISQHIPQYVNPDVLEVEFGGKLE 171
[Close]
BLAST of mRNA_H-canaliculatus_F_contig100.26.1 vs. uniprot
Match: A0A1R1YNC8_9FUNG (CRAL-TRIO domain-containing protein n=1 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1YNC8_9FUNG)

HSP 1 Score: 108 bits (270), Expect = 1.250e-21
Identity = 68/202 (33.66%), Postives = 103/202 (50.99%), Query Frame = 3 
Query:  405 EDGLLLRYLEMAYWTMETMGQALPDAVASTIRWREGAGPHLVTDHQVAEEAMYGKMYVRGHDREGRPIIHYRPGLEKSFDTEKGLNLLFYTLERAKTMLPKGQTQFAVLADCSGFGPSKTPPLPMLKTAFITMQRHYPMRLGYVMIANAGGPIVFVWKLISAVLDERTKDKIFFVS----KREAEAKLTGLISPSDLPASLP 998
            ED  LL+++      ME + +A    +  T+ WR    PH +   ++  EAM GK Y+ G D+EGRP +  +P L+ + +    +  + + +E A  ++P G T+  +L D S    S  P   + K+    +Q HYP  LG  +I NA    ++ +KLIS  +D  TK KIFF S    K +  AKL    S S LPA+ P
Sbjct:   89 EDKNLLKFIRARKHVMEDVMKA----IRKTLEWRISYRPHAINPDEIRTEAMPGKSYMNGFDKEGRPALILKPYLQNTKEPVSQIKYVVFNMELANKIMPVGVTKLIILIDLSHVVFSLIPSPKVSKSFLDVLQSHYPETLGRGIIINAPSIFLYTYKLISPFIDPVTKSKIFFASIAPSKTKQAAKLDRGSSASSLPATPP 286
[Close]
BLAST of mRNA_H-canaliculatus_F_contig100.26.1 vs. uniprot
Match: K5WQZ5_PHACS (CRAL-TRIO domain-containing protein n=1 Tax=Phanerochaete carnosa (strain HHB-10118-sp) TaxID=650164 RepID=K5WQZ5_PHACS)

HSP 1 Score: 106 bits (264), Expect = 2.710e-21
Identity = 62/196 (31.63%), Postives = 98/196 (50.00%), Query Frame = 3 
Query:  423 RYLEMAYWTMETMGQALPDAVASTIRWREGAGPHLVTDHQVAEEAMYGKMYVRGHDREGRPIIHYRPGLEKSFDTEKGLNLLFYTLERAKTMLPKGQTQFAVLADCSGFGPSKTPPLPMLKTAFITMQRHYPMRLGYVMIANAGGPIVFVWKLISAVLDERTKDKIFFVSKREAEAKLTGLISPSDLPASLPGGLD 1010
            RY+  A W +E   +     +  T++WR    P L+   +V  E++ GK+ + G D++GRPII+ RPGLE +  + + L  L ++LERAK ++P GQ    ++ D         P + + +     +Q+HY   LG  ++ N    + F +K IS  LD  T+DK+ F         LT LI    L AS  G  +
Sbjct:   65 RYMRAAKWDLEDAKKR----IEGTMKWRREFKPDLIQPEEVRIESVTGKIVINGFDKDGRPIIYMRPGLENTERSPRQLRYLVWSLERAKDLMPPGQESLVIIVDYKSCSLRTNPSISVARQTLTILQQHYVETLGRAVVVNLPLILNFFYKGISPFLDPVTRDKMRF------NPDLTELIPKEQLDASFGGDFE 250
[Close]
BLAST of mRNA_H-canaliculatus_F_contig100.26.1 vs. uniprot
Match: A0A0C3EQ18_9AGAM (CRAL-TRIO domain-containing protein n=1 Tax=Scleroderma citrinum Foug A TaxID=1036808 RepID=A0A0C3EQ18_9AGAM)

HSP 1 Score: 104 bits (260), Expect = 5.850e-21
Identity = 76/248 (30.65%), Postives = 112/248 (45.16%), Query Frame = 3 
Query:  330 ELRGQLE--EQYGHTLWTRAKAVRHELE------DGLLLRYLEMAYWTMETMGQALPDAVASTIRWREGAGPHLVTDHQVAEEAMYGKMYVRGHDREGRPIIHYRPGLEKSFDTEKGLNLLFYTLERAKTMLPKGQTQFAVLADCSGFGPSKTPPLPMLKTAFITMQRHYPMRLGYVMIANAGGPIVFVWKLISAVLDERTKDKIFFVSKREAEAKLTGLISPSDLPASLPGGLDKFSYSNEEYLSLL 1049
            E   Q+E   QY HTL        H+ E         L RY+  A W M    +     + +TI WR    P L+   +V  E   GK+ + G D++GRPII+ RPGLE +    + L  L + LERAK M+P GQ    +  D        +P + +       +Q+HY   LG  ++ N    + F +K IS  LD  T++K+ F         L  +I PS L +   GG  +F + +E Y   +
Sbjct:   26 EQSAQIEVLRQYVHTLVLPESDPYHKWELRWLNRPDTLPRYMRAAKWKMHDAQKR----IKATIEWRRDFKPDLIPPDEVKIECETGKIILNGFDKDGRPIIYMRPGLENTETGPRQLRHLVWWLERAKDMMPLGQESLVIFVDYKTATLRTSPSVSVAAKVLSILQQHYVETLGRAIVVNLPFILNFFFKGISPFLDPVTREKLCF------NPNLADVIPPSQLDSEF-GGEYEFEFDHESYWKQI 262
[Close]
BLAST of mRNA_H-canaliculatus_F_contig100.26.1 vs. uniprot
Match: A0A0C3S322_PHLGI (CRAL-TRIO domain-containing protein n=1 Tax=Phlebiopsis gigantea 11061_1 CR5-6 TaxID=745531 RepID=A0A0C3S322_PHLGI)

HSP 1 Score: 102 bits (254), Expect = 5.100e-20
Identity = 76/274 (27.74%), Postives = 121/274 (44.16%), Query Frame = 3 
Query:  291 DGEAEPWKAIMLAELRGQLEEQYGHTLWTRAKAVRHELEDGLLLRYLEMAYWTMETMGQALPDAVASTIRWREGAGPHLVTDHQVAEEAMYGKMYVRGHDREGRPIIHYRPGLEKSFDTEKGLNLLFYTLERAKTMLPKGQTQFAVLADCSGFGPSKTPPLPMLKTAFITMQRHYPMRLGYVMIANAGGPIVFVWKLISAVLDERTKDKIFFVSKREAEAKLTGLISPSDLPASLPGGLDKFSYSNEEYLSLLQ*ADRKGYESVGSSVPRASKE 1112
            D ++   KA++   L   L E   +  W     +R   +   + RY+  A W +    +     +  T++WR    P L+   +V  E++ GK+ + G D++GRPII+ RPGLE +  + + L  L + LERAK ++P GQ    ++ D         P + + +   + +Q+HY   LG  ++ N    + F +K IS  LD  T+DK+ F         LT L+    L A   G    F Y  E      Q     G    G+ V  A  E
Sbjct:   25 DSQSAKLKALLEHALSRALPESDPYRKWE----LRWLNKPDTIPRYMRAAKWDLVDGKKR----IEGTMQWRREFKPDLIPPEEVRIESLTGKIVINGFDKDGRPIIYMRPGLENTERSPRQLRHLVWCLERAKDLMPPGQESCVIVVDYKSCSLRTNPSISIARQTLVILQQHYVETLGRALVVNLPMILNFFYKGISPFLDPVTRDKMRF------NPDLTELVPKEQLDAVFGGD---FEYEFEPSSYWEQIVAACGIAEDGTRVEPAKPE 281
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig100.26.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQ39_ECTSI6.280e-11984.76CRAL-TRIO domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JFY3_9PHAE1.530e-6682.96CRAL-TRIO domain-containing protein n=1 Tax=Ectoca... [more]
A0A835Z968_9STRA1.830e-4033.33CRAL-TRIO domain-containing protein n=1 Tax=Tribon... [more]
D8LQH2_ECTSI8.700e-3834.02CRAL-TRIO domain-containing protein n=2 Tax=Ectoca... [more]
A0A835ZL56_9STRA3.500e-3634.51CRAL-TRIO domain-containing protein n=1 Tax=Tribon... [more]
A0A7S2XX21_9STRA6.300e-3442.68Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A1R1YNC8_9FUNG1.250e-2133.66CRAL-TRIO domain-containing protein n=1 Tax=Smitti... [more]
K5WQZ5_PHACS2.710e-2131.63CRAL-TRIO domain-containing protein n=1 Tax=Phaner... [more]
A0A0C3EQ18_9AGAM5.850e-2130.65CRAL-TRIO domain-containing protein n=1 Tax=Sclero... [more]
A0A0C3S322_PHLGI5.100e-2027.74CRAL-TRIO domain-containing protein n=1 Tax=Phlebi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig100contigH-canaliculatus_F_contig100:36742..41266 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score369.4
Seed ortholog evalue1.6e-99
Seed eggNOG ortholog2880.D7FQ39
EggNOG free text desc.intermembrane phospholipid transfer
EggNOG OGsKOG1470@1,KOG1470@2759
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionCRAL-TRIO domain
Ec32 orthologEc-01_007590.1
Exons5
Model size2570
Cds size903
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928627.7339878-UTR-H-canaliculatus_F_contig100:36741..368931622928627.7339878-UTR-H-canaliculatus_F_contig100:36741..36893Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig100 36742..36893 +
1696845500.754281-UTR-H-canaliculatus_F_contig100:36741..368931696845500.754281-UTR-H-canaliculatus_F_contig100:36741..36893Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig100 36742..36893 +
1622928627.8095052-UTR-H-canaliculatus_F_contig100:39751..412661622928627.8095052-UTR-H-canaliculatus_F_contig100:39751..41266Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig100 39752..41266 +
1696845500.8152504-UTR-H-canaliculatus_F_contig100:39751..412661696845500.8152504-UTR-H-canaliculatus_F_contig100:39751..41266Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig100 39752..41266 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928627.748003-CDS-H-canaliculatus_F_contig100:36893..371651622928627.748003-CDS-H-canaliculatus_F_contig100:36893..37165Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig100 36894..37165 +
1696845500.767493-CDS-H-canaliculatus_F_contig100:36893..371651696845500.767493-CDS-H-canaliculatus_F_contig100:36893..37165Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig100 36894..37165 +
1622928627.7618198-CDS-H-canaliculatus_F_contig100:37617..377351622928627.7618198-CDS-H-canaliculatus_F_contig100:37617..37735Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig100 37618..37735 +
1696845500.7771475-CDS-H-canaliculatus_F_contig100:37617..377351696845500.7771475-CDS-H-canaliculatus_F_contig100:37617..37735Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig100 37618..37735 +
1622928627.7719114-CDS-H-canaliculatus_F_contig100:38437..385481622928627.7719114-CDS-H-canaliculatus_F_contig100:38437..38548Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig100 38438..38548 +
1696845500.7865782-CDS-H-canaliculatus_F_contig100:38437..385481696845500.7865782-CDS-H-canaliculatus_F_contig100:38437..38548Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig100 38438..38548 +
1622928627.7837713-CDS-H-canaliculatus_F_contig100:38911..391361622928627.7837713-CDS-H-canaliculatus_F_contig100:38911..39136Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig100 38912..39136 +
1696845500.7958448-CDS-H-canaliculatus_F_contig100:38911..391361696845500.7958448-CDS-H-canaliculatus_F_contig100:38911..39136Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig100 38912..39136 +
1622928627.7952497-CDS-H-canaliculatus_F_contig100:39574..397511622928627.7952497-CDS-H-canaliculatus_F_contig100:39574..39751Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig100 39575..39751 +
1696845500.8049037-CDS-H-canaliculatus_F_contig100:39574..397511696845500.8049037-CDS-H-canaliculatus_F_contig100:39574..39751Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig100 39575..39751 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig100.26.1prot_H-canaliculatus_F_contig100.26.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig100 36894..39751 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig100.26.1

>prot_H-canaliculatus_F_contig100.26.1 ID=prot_H-canaliculatus_F_contig100.26.1|Name=mRNA_H-canaliculatus_F_contig100.26.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=301bp
MATTREEDGTKRKRRALQALWRRVTEKLGGGSGSRYWEKRGRKVGGDGEA
EPWKAIMLAELRGQLEEQYGHTLWTRAKAVRHELEDGLLLRYLEMAYWTM
ETMGQALPDAVASTIRWREGAGPHLVTDHQVAEEAMYGKMYVRGHDREGR
PIIHYRPGLEKSFDTEKGLNLLFYTLERAKTMLPKGQTQFAVLADCSGFG
PSKTPPLPMLKTAFITMQRHYPMRLGYVMIANAGGPIVFVWKLISAVLDE
RTKDKIFFVSKREAEAKLTGLISPSDLPASLPGGLDKFSYSNEEYLSLLQ
*
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mRNA from alignment at H-canaliculatus_F_contig100:36742..41266+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig100.26.1 ID=mRNA_H-canaliculatus_F_contig100.26.1|Name=mRNA_H-canaliculatus_F_contig100.26.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=4525bp|location=Sequence derived from alignment at H-canaliculatus_F_contig100:36742..41266+ (Hapterophycus canaliculatus Oshoro5f female)
TGCGCGACGAGTGGCAACACCCCCAGTTGTTTCCGGGTGCACTGACGTCA
CGCGCAAGAACGACACGGACGGAAGAAAGGGGGACTGGAAACGAGGAAGA
CGGCGAAAGAATTGAGGGGAAGGAAATCGAAAAGAGGAGAGAAGTGGGGC
CGATGGCGACTACCCGCGAAGAGGATGGGACGAAGAGAAAACGGCGGGCG
TTGCAAGCCTTGTGGAGGCGGGTAACCGAGAAGCTAGGGGGCGGAAGCGG
CAGCCGCTACTGGGAAAAGCGAGGTCGTAAGGTGGGGGGAGACGGAGAGG
CGGAGCCGTGGAAGGCCATAATGCTGGCGGAGTTGAGGGGGCAGTTAGAG
GAACAGTATGGTCACACGCTTTGGACGCGCGCGAAGGCAGTGAGGCACGA
GCTCGAGGATGGGCTGCTGCTGAGGTGTGTGCATGGCAGAGCGAGTGGGA
GAGTGGAATAGATGTGCCCATTCACGAATGGGTGCGTCAGAGAGGTAAAC
ATGAGGAACACAGCTGCGATTCGAAAAGTACGCGCTGGTTCTCATGGAGA
CGTGGGTATCCAATACGTCCGAAAGCGAATGTGCAGCACTAGGATGATAT
GCGATTTGAGCATCCAACGATAGTTCTATTGCTGATGTTCGGACTGTGCG
CTCTTCGAGCAAGAGGCAATCATGAAGTCTTGAGTGATAGCTCATCGGTG
TACCGCGGCTTCTCCATGCGCACATCAATGCGGAAGTAGAAAATTGTTCA
TTTATAGCATGCTGAAACGACGTCATATTCCGTTGGCGTGGCTCTCCCTT
CCGCAGATACCCCAAAGGTGCTTGTTACGGCCGTCTTTTTAGTCCGATCT
GAAACGCGTTTCCGTGTACGTCATAGGTATTTGGAGATGGCGTACTGGAC
GATGGAAACCATGGGACAGGCGCTGCCGGACGCTGTCGCTAGCACGATTC
GCTGGCGAGAGGGCGCGGGGCCGCACCTCGTCACAGACCACCAGGTAAAC
TTGCTCACGGAACCTTGAAGCTGAAGGATTCCGAGACGCTCGTCGTAGCA
TCACCGAGATAGAAGCCCTTACGAGCACACGGGTGTACTTGCGGAATCAC
ACCAGGGGGCGACTGTTTGCTTGTGCGTGAGTTCGTCCGTGTGTTTGTGT
GTTTTCCCCACTGGACCGCGCTGCGCGACTAAAGACACGAAGCCATTGAC
CATTTAGGATACGTCTACCTCGACGCGATAAGAAGGAAAACGTGCGCTGA
ATTCCGGTGTCCCCGAGAAGGACCTGGGGAAGGACTGGACGAAAAAATGT
AGCCGCTGGAATAAAGGCCACGGACCAAAGAAATAGACCATCAATTTTCA
CGATCTTTTACCTCTGCTGCAAGTCGTACCCCCTGCAGCACCCTCGTTGT
CCTGGCTTGAGAGTTCGGAGGGGTTGCCCCTGCTGATGCTTGTGTCCTAT
CTTGTTTTCGATCTTCGAAATCGATGTTTGATTGGCGGACAGAGTGCTAC
GGCGGGGCAATGAGGAAAGCGCGGGCAGCACAACCATGAATCGTCGAGTG
CAGCTGGACGAAATCTACAGCACATCTTCATAATTTTCAAGCTTTCACAT
CGGCCGAAGCTGACCAGCAGTTCCATACCATAAGCTAAAGTGGCATTGCT
TTAGATCCGTTTCACTTCACATCTCCTTTCTTTTTTGCCTACACAGGTGG
CGGAGGAGGCAATGTATGGCAAGATGTACGTAAGGGGCCACGATCGCGAG
GGGAGACCTATCATTCACTACCGCCCCGGCCTTGAGAAGAGCTTCGACAC
AGAGAAGGTATCCAACGCGTCTAGGTCCGTCGGTCTGGCGTGCGTCGCTT
TGCCTATGTTGTTATATGGGTAAGTAGGAGCAGGTAACTCAGGAGATAGA
TGAGTTGGTCACTTGGCGAAGGAAGCCGTTAAGGTCCTCTCGCCTTTTCC
CTCTCAAACTGTGAAGCTCAGTTTCCGAACACGCACGTCCAAACAGAAGC
AAGGGCTTTCGTTCTTCCTGTTTGTGCGCTGAGAAGAAGCAGCGGGCCAT
ATCGAGGCCGGTTGAGGACTGTGGCCATGTGAGTAACGTTTGCTCCGTGT
CTAGCAGTCGTCCGTCCGCTCGTGTAACACGCACCGTTCTGAGAACACGA
CACACCACACCGCACTACAGGGACTGAACTTATTGTTCTACACCTTGGAA
AGGGCGAAAACCATGCTTCCTAAGGGACAGACACAGTTCGCGGTGCTGGC
CGACTGCTCCGGTTTCGGGCCTTCCAAGACTCCGCCCCTGCCCATGCTCA
AGACAGCATTCATCACCATGCAGCGACATTACCCCATGCGCCTGGGGTAT
GTGATGATCGCGAATGCAGGGGGTCCCATCGTCTTCGTGTGGAAGGTGTG
TGCGGGCTTCGATCGTCAATCTCGAGCGGTTTTATTTGTGCGGAGGACGA
AATCGTCACTATTGATAGTCAGGGTGGACACCATGACCTTCAGGTTTCCA
GTCAGCCGAGTACTCGTCGTCCAAGACAGCCGTGCTTCATCCTGACTCTA
CTTCCACCTCATATTTCCCTCAATCTCCGGCTCTAGCTTGCTGCCTGCGC
GAGTCTCCGCGCCTTGCGCGTATTTTGTCGCCTGCCTTCGTGTCAAGAAT
GACCACCTTTAATCTCGTCGGCCATCGCGCAGACGACGGGAAGGAGGTGC
CCCCTCATCTGCATGTCGGGTAGGTTCTGCGAATTATCTCAAGCTTTGCC
CTCCCCCGCTTCTCTTGCACTGACCCATCTTGCTGTCTACTGGCATACGC
GTTAACCGTCCAATGTTTTCCCTTCTCTTTCAGCTAATTTCCGCCGTGCT
GGACGAACGGACGAAGGACAAGATATTTTTCGTTTCGAAGAGGGAGGCCG
AGGCAAAGCTGACCGGTCTCATAAGTCCGTCTGATTTGCCAGCTTCGCTG
CCGGGCGGCCTGGACAAATTTAGCTACTCTAACGAGGAATACCTTTCTTT
GCTTCAGTAAGCCGACAGGAAGGGGTACGAGTCGGTCGGGTCGTCAGTGC
CCCGAGCGAGCAAAGAGTAAGGAAGGAAGAGTGTTTTTGTTTTGTGGAAG
TCGGGATGCGATTTGTGAGACTGCGGTCATGGCATTCTGCTGTGTTCGCA
GCCGCGATGACTTCGGCGAAGCGGGACGACTGTCGGTGCGGACGGTACAG
TCAAGGAAGCATTTTACGCCGTGGAGGCGGACGGTCACTTGAATCCAAAA
TTGTACTCAGAGGTAGAAAAAGGGAACTCGTACGAATTCTTGTCATCTCG
AAATCCAACGCTTGTTCGTCGCGGACTTCAGCAATACAATGTGCGCTTTT
TCGTCGTTCGCTTTCATGAAGATGTCTATCGGCTTTCAAATATTGAAAGG
AGGGTCTGCATATGGGTCACACGATGAAGATCCTCTTGATCGTGTTCTAC
GGCGATGGAACCTACAAAAGTGCGCGATGTTAGGGCAAGGAGGGAATCGT
GGGATTAGATTGGGGCTGACGGGTTCGATCGAAAGTGCGGCTTTTGGGCC
TCGGCGCGCAGCGGAATGCAGCACTTGCCCCGAATGGTAACCAGTTGAAC
GGAGCGCGGCATCATTTGGCTTGATTGAGGCCGACGGCAGAGTCGAAATT
GGACACGAACTTCAATTGTGCAAGGGAGATCCGCACCGATGTGAGCACGT
GTCATCACTCTGCTTCTGTCTGCCGCCCCCAAGATGTTTCGGTGTACCTC
CTGAGCTTTCGCATGGCGAGTCAAAAGAAGTCCCGCCGAGATATCTTAAC
CGAAACGAGGAACCTTCTTCCAATATTAGATCGGTAGCGCGAGCGGTCTA
GGGGAGACTATGATAAAAAAGGAGTCGACACGAGCGTGGTATATTGCTGC
GTGTTCCAGCTGGTGTTGACTGTCCACACAGCAGGTACTTGACTACGGGA
TCACATGTTTGCGTTTTCTTCAATATCGGATGGTATGAATCCGGCGCTCT
CTGGGCGCCGGATTCATCCGGAGTGAAAACTAGGAATCACCTATCGTACC
CGCTTAGGTTGGAAACCAAGGAAAAGGACGCGCGAGTCGTTTTTAGCTGG
GCAAAAGTGCTGCGTAGCCTCCACACTATCGCGTCGTTTGTTTACCTGTT
GTGGAAAATATTCGCGAAGTCAAACTAATCGTTGCAAATCGGTTGAGCGG
ATTGTTGTCGTGGACTTAAAACGGGAAGTACGACACTTGGCCATGTTGTG
CATTTCACGTATTTGCTTGTACGAGAGAGCTGGGGAGTAGACGCGATGAA
AGCGAGGATCAATCCAAGTAATACCTTACCTGGGTGTAACAAAGAGTTTT
CTGTGGTGAGGCAGATAACAAACGAACATCGTCGACTTTTCAGTGTTTGT
TTCATGTCGTAGGATGTAGTGACTATGACCGCAGTGGTCTTCGATATGAA
CCTGTTTCAAGAAGCAAAGGAACAGCGAAGTGGTTTCGGCGAGCTTATCA
GCGTTGCTACACCTGGGTGTTGTGC
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig100:36742..41266+

>mRNA_H-canaliculatus_F_contig100.26.1 ID=mRNA_H-canaliculatus_F_contig100.26.1|Name=mRNA_H-canaliculatus_F_contig100.26.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1806bp|location=Sequence derived from alignment at H-canaliculatus_F_contig100:36742..41266+ (Hapterophycus canaliculatus Oshoro5f female)
ATGGCGACTACCCGCGAAGAGGATGGGACGAAGAGAAAACGGCGGGCGTT
GCAAGCCTTGTGGAGGCGGGTAACCGAGAAGCTAGGGGGCGGAAGCGGCA
GCCGCTACTGGGAAAAGCGAGGTCGTAAGGTGGGGGGAGACGGAGAGGCG
GAGCCGTGGAAGGCCATAATGCTGGCGGAGTTGAGGGGGCAGTTAGAGGA
ACAGTATGGTCACACGCTTTGGACGCGCGCGAAGGCAGTGAGGCACGAGC
TCGAGGATGGGCTGCTGCTGAGATGGCGACTACCCGCGAAGAGGATGGGA
CGAAGAGAAAACGGCGGGCGTTGCAAGCCTTGTGGAGGCGGGTAACCGAG
AAGCTAGGGGGCGGAAGCGGCAGCCGCTACTGGGAAAAGCGAGGTCGTAA
GGTGGGGGGAGACGGAGAGGCGGAGCCGTGGAAGGCCATAATGCTGGCGG
AGTTGAGGGGGCAGTTAGAGGAACAGTATGGTCACACGCTTTGGACGCGC
GCGAAGGCAGTGAGGCACGAGCTCGAGGATGGGCTGCTGCTGAGGTATTT
GGAGATGGCGTACTGGACGATGGAAACCATGGGACAGGCGCTGCCGGACG
CTGTCGCTAGCACGATTCGCTGGCGAGAGGGCGCGGGGCCGCACCTCGTC
ACAGACCACCAGGTATTTGGAGATGGCGTACTGGACGATGGAAACCATGG
GACAGGCGCTGCCGGACGCTGTCGCTAGCACGATTCGCTGGCGAGAGGGC
GCGGGGCCGCACCTCGTCACAGACCACCAGGTGGCGGAGGAGGCAATGTA
TGGCAAGATGTACGTAAGGGGCCACGATCGCGAGGGGAGACCTATCATTC
ACTACCGCCCCGGCCTTGAGAAGAGCTTCGACACAGAGAAGGTGGCGGAG
GAGGCAATGTATGGCAAGATGTACGTAAGGGGCCACGATCGCGAGGGGAG
ACCTATCATTCACTACCGCCCCGGCCTTGAGAAGAGCTTCGACACAGAGA
AGGGACTGAACTTATTGTTCTACACCTTGGAAAGGGCGAAAACCATGCTT
CCTAAGGGACAGACACAGTTCGCGGTGCTGGCCGACTGCTCCGGTTTCGG
GCCTTCCAAGACTCCGCCCCTGCCCATGCTCAAGACAGCATTCATCACCA
TGCAGCGACATTACCCCATGCGCCTGGGGTATGTGATGATCGCGAATGCA
GGGGGTCCCATCGTCTTCGTGTGGAAGGGACTGAACTTATTGTTCTACAC
CTTGGAAAGGGCGAAAACCATGCTTCCTAAGGGACAGACACAGTTCGCGG
TGCTGGCCGACTGCTCCGGTTTCGGGCCTTCCAAGACTCCGCCCCTGCCC
ATGCTCAAGACAGCATTCATCACCATGCAGCGACATTACCCCATGCGCCT
GGGGTATGTGATGATCGCGAATGCAGGGGGTCCCATCGTCTTCGTGTGGA
AGCTAATTTCCGCCGTGCTGGACGAACGGACGAAGGACAAGATATTTTTC
GTTTCGAAGAGGGAGGCCGAGGCAAAGCTGACCGGTCTCATAAGTCCGTC
TGATTTGCCAGCTTCGCTGCCGGGCGGCCTGGACAAATTTAGCTACTCTA
ACGAGGAATACCTTTCTTTGCTTCAGTAACTAATTTCCGCCGTGCTGGAC
GAACGGACGAAGGACAAGATATTTTTCGTTTCGAAGAGGGAGGCCGAGGC
AAAGCTGACCGGTCTCATAAGTCCGTCTGATTTGCCAGCTTCGCTGCCGG
GCGGCCTGGACAAATTTAGCTACTCTAACGAGGAATACCTTTCTTTGCTT
CAGTAA
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