mRNA_H-canaliculatus_F_contig133.2699.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig133.2699.1
Unique NamemRNA_H-canaliculatus_F_contig133.2699.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
BLAST of mRNA_H-canaliculatus_F_contig133.2699.1 vs. uniprot
Match: A0A6H5JKZ2_9PHAE (DLH domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JKZ2_9PHAE)

HSP 1 Score: 378 bits (971), Expect = 4.850e-123
Identity = 212/332 (63.86%), Postives = 237/332 (71.39%), Query Frame = 3
Query:   93 MYRSVAQVATLFFSLPSARGWLHGIRSNSFSHGYGKIFRSTLAMSSSERTSIETIKVEELWPNLAGKQTCASEHAGKIIREAWAADLRHSPIRDGDKRTRRSAASNTVSKEDTTNDGR---SSSVSWSIRRSVVEYNDGDTVLQGLCARPEGEDLPERLPGVILAHTAVGPQEDVILWKLDALALLGYVAFALDMFGAGRALWSRDESLAARRPITEDRSKMQDRATAAVQTLGRMEGVDEERLAAVGYCFGGMAVLDLARMVPPDVE---TNSSPKLRAVASLHGILAPILPDTGGRGGAGQAAGDAALAVPKVLVLHASADPFVPPTQVR 1070
            M R +AQ   L   LPSARGW   +         G   R   +M       ++ I V+++WP LAGK+TCA+E AGK+IR AWA                        +  DTTN GR   SSS SWSIRRSVVEYNDGDT LQGL  RPEGE LP+RLPGVILAHTAVGPQED+ILWKLD +ALLGY AFALDMFG GRALW+R ESLAARRPITEDRS MQ RATAAV+TL +MEG+DEERLAAVGYCFGGM VLDLARMV PD +    N+ P+L+AVASLHGILAPI P TGG  GAG AA DAALAVP+VLVLHA+ADPFVPP QVR
Sbjct:    1 MCRGLAQFVALVSVLPSARGWQFALSPRFAGKTPGTRLRRVQSM------DMKMISVDDIWPQLAGKETCANEAAGKVIRAAWAV---------------------ATTNPDTTN-GRGASSSSASWSIRRSVVEYNDGDTALQGLYTRPEGEGLPDRLPGVILAHTAVGPQEDMILWKLDQIALLGYAAFALDMFGTGRALWNRAESLAARRPITEDRSLMQARATAAVRTLSQMEGIDEERLAAVGYCFGGMTVLDLARMVRPDGDDAGANTPPRLKAVASLHGILAPISPGTGGEDGAGLAADDAALAVPRVLVLHATADPFVPPEQVR 304          
BLAST of mRNA_H-canaliculatus_F_contig133.2699.1 vs. uniprot
Match: A0A836CLU0_9STRA (Dienelactone hydrolase family protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLU0_9STRA)

HSP 1 Score: 162 bits (410), Expect = 1.370e-41
Identity = 106/272 (38.97%), Postives = 141/272 (51.84%), Query Frame = 3
Query:  261 VEELWPNLAGKQTCASEHAGKIIREAWAA-DLRHSPIRDGDKRTRRSAASNTVSKEDTTNDGRSSSVSWSIRRSVVEYNDGDTV-LQGLCARPEGEDLPERLPGVILAHTAVGPQEDVILWKLDALALLGYVAFALDMFGAGRALWSRDESLAARRPITEDRSKMQDRATAAVQTLGRMEGVDEERLAAVGYCFGGMAVLDLARMVPPDVETNSSPKLRAVASLHGILAPILPDTGGRGGAGQAAGDAALAVPKVLVLHASADPFVPPTQVR 1070
            +++ WP L G +T AS  A  I+   W+  +L                                    + ++R +V Y D   + LQG   RP  +   E LP V++AHTAVG Q+D++L  LD +A LGYVAF LDMFGAG+A+W R++SLAAR P+T DRS +  RA AA+    ++ GVD  R+A VGYCFGG+  LD  R         +   + A  + HGILAP  PD         + G       +VLVLH  ADPFVPP QVR
Sbjct:    2 IDKCWPQLTGLRTSASAEAAAILNNRWSQFELERL---------------------------------FDLQRQIVPYIDHTGLPLQGFVVRPAAQ-AAESLPCVLVAHTAVGIQDDLLLQILDGVAGLGYVAFGLDMFGAGQAVWDREQSLAARAPLTSDRSLLARRAEAALHCATQLRGVDARRVAVVGYCFGGIVALDTVR---------AGCGIAAAITFHGILAPPPPDQDLSWCKHYSTGC------RVLVLHGGADPFVPPDQVR 224          
BLAST of mRNA_H-canaliculatus_F_contig133.2699.1 vs. uniprot
Match: A0A7S0HUL7_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0HUL7_9CRYP)

HSP 1 Score: 152 bits (383), Expect = 6.780e-38
Identity = 92/198 (46.46%), Postives = 118/198 (59.60%), Query Frame = 3
Query:  468 IRRSVVEYNDGDTVLQGLCARPEGEDLPERLPGVILAHTAVGPQEDVILWKLDALALLGYVAFALDMFGAGRALWSRDESLAARRPITEDRSKMQDRATAAVQTLGRMEGVDEERLAAVGYCFGGMAVLDLARMVPPDVETNSSPKLRAVASLHGILA-PILPDT-GGRGGAGQAAGDAALAVP-KVLVLHASADPFV 1052
            +++S V Y++G   L G    P+  +  +++P V+L HTAVG QED + WKL+A+A LG+VAF  DMFG GRALW R+E+L ARR +  DR +M DR  AA  T+  +  VD     A+G+CFGGMAVLDLAR       +   P L A  S HGIL  P LPD  GGR G           VP ++LV H   DPFV
Sbjct:   36 LKKSSVSYSEGGRELMGEACWPDVGN--QKMPAVLLVHTAVGLQEDFMRWKLEAVASLGFVAFGADMFGTGRALWDREEALEARRELVCDRRRMIDRVKAAATTMMSLPQVDPRGFGALGFCFGGMAVLDLAR-------SGCMPNLEATVSFHGILDDPDLPDDYGGREGP----------VPGEILVCHGEDDPFV 214          
BLAST of mRNA_H-canaliculatus_F_contig133.2699.1 vs. uniprot
Match: A0A7S1HA30_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1HA30_HEMAN)

HSP 1 Score: 135 bits (341), Expect = 5.130e-33
Identity = 78/158 (49.37%), Postives = 95/158 (60.13%), Query Frame = 3
Query:  600 EDVILWKLDALALLGYVAFALDMFGAGRALWSRDESLAARRPITEDRSKMQDRATAAVQTLGRMEGVDEERLAAVGYCFGGMAVLDLARMVPPDVETNSSPKLRAVASLHGILAPI-LPDTGGRGGAGQAAGDAALAVPKVLVLHASADPFVPPTQVR 1070
            ED + WKLD LA  GY+AF +DMFGAGRALW ++E+LAAR+P+ EDRS+M +R   A +T   ME  D  R+ A+GYCFGGMAVLDLAR   P         L+A  SLHGIL  +  P T                V KVLV H  +DPFV P  +R
Sbjct:    1 EDFMFWKLDKLASQGYLAFGVDMFGAGRALWDKEEALAARKPLREDRSQMIERMMCAYETACSMEVADSARVGAIGYCFGGMAVLDLARSGLPK-------SLKATVSLHGILDRLDTPPTD--------------VVGKVLVCHGGSDPFVTPEMLR 137          
BLAST of mRNA_H-canaliculatus_F_contig133.2699.1 vs. uniprot
Match: A0A7S2XY83_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XY83_9STRA)

HSP 1 Score: 132 bits (333), Expect = 2.190e-30
Identity = 101/302 (33.44%), Postives = 141/302 (46.69%), Query Frame = 3
Query:  210 STLAMSSSERTSIETIKVEELWPNLAGKQTCASEHAGKIIREAWAADLRHSPIRDGDKRTRRSAASNTVSKEDTTNDGRSSSVSWSIRRSVVEYNDGDTV-LQGLCARPEGEDLPE--------RLPGVILAHTAVGPQEDVILWKLDALALLGYVAFALDMFGA------GRALWSRDESLAARRPITEDRSKMQDRATAAVQTLGRMEGVDEERLAAVGYCFGGMAVLDLARMVPPDVETNSSPKLRAVASLHGIL-APILPDTGGRGGAGQAAGDAALAVPKVLVLHASADPFVPPTQV 1067
            S LA  +   + +E   ++ LW      +T ASE   ++++ A+  DL    +  G ++                         ++IRR+ + Y+D     L GL A P  + LP         +LPGV++AHTAVG  +D ILWKL+A+A LGY AFALDM+G           W R  +   RR + EDR   Q RA A  +       VDE R+AA+GYC+GGM VLDLA+   P         L+ V ++HGIL  P   DT             +L    V + H  ADPFV   Q+
Sbjct:   37 SELARQARALSFMEFKPLKTLWDFTGDFKTSASEPEAQVLQNAYENDL---DVAHGHEQ------------------------GYTIRRTKIPYSDSTQARLSGLLAWPVQDPLPPAGAPALPPKLPGVLVAHTAVGNGDDFILWKLEAIASLGYAAFALDMYGEEASGAHNEGAWDRAVNAEVRRSLREDRLSQQARARAGYEVFASQPMVDESRMAALGYCYGGMVVLDLAKSGVP---------LKGVGTMHGILDVPKELDT-------------SLIQCPVQLYHGKADPFVSQEQL 289          
BLAST of mRNA_H-canaliculatus_F_contig133.2699.1 vs. uniprot
Match: A0A0G4EJ35_VITBC (DLH domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EJ35_VITBC)

HSP 1 Score: 129 bits (324), Expect = 1.190e-29
Identity = 82/206 (39.81%), Postives = 110/206 (53.40%), Query Frame = 3
Query:  462 WSIRRSVVEYNDGDTVLQGLCARPEGEDLPERL----PGVILAHTAVGPQEDVILWKLDALALLGYVAFALDMFGAGRALWSRDESLAARRPITEDRSKMQDRATAAVQTLGRMEGVDEERLAAVGYCFGGMAVLDLARMVPPDVETNSSPKLRAVASLHGIL-APILPDTGGRGGAGQAAGDAALAVPKVLVLHASADPFVPPTQ 1064
            W+ +++ V Y D  T L GL    E +D   ++    P V++  TAVG +ED +   LD  A LGYVAF +DM+G G A+W +  S A R+P+T DR+K+Q R  AA Q    +  V E+ +A VGYCFGGM  LDLAR   P         ++ V S HG+L  P +    G            L+ P VLV H S DPF+ P Q
Sbjct:   42 WTYKQTDVAYQDEGTELMGLAVWVERDDASRQILGERPCVLVCPTAVGLREDFLFGALDRYASLGYVAFGVDMYGEG-AVWDKGRSRAIRQPLTADRTKLQRRMVAAYQAAQSLPQVQEDNIAVVGYCFGGMCALDLARAGVP---------MKGVVSFHGVLDRPAVDKVPG-----------GLSCP-VLVHHGSDDPFISPDQ 225          
BLAST of mRNA_H-canaliculatus_F_contig133.2699.1 vs. uniprot
Match: A0A661FZ67_9GAMM (Carboxymethylenebutenolidase n=2 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A661FZ67_9GAMM)

HSP 1 Score: 121 bits (303), Expect = 1.970e-27
Identity = 78/200 (39.00%), Postives = 110/200 (55.00%), Query Frame = 3
Query:  468 IRRSVVEYNDGDTVLQGLCARPEGEDLPERLPGVILAHTAVGPQEDVILWKLDALALLGYVAFALDMFGAGRALWSRDESLAARRPITEDRSKMQDRATAAVQTLGRMEGVDEERLAAVGYCFGGMAVLDLARMVPPDVETNSSPKLRAVASLHGILAPILPDTGGRGGAGQAAGDAALAVPKVLVLHASADPFVPPTQV 1067
            I+   VEY DGD VL+G  A  +     +R PGV++AH   G  E     K ++LA LGY  FALD++G G    + +E+ A  +P+ +DR  +Q R T A++ + + E VD+ R+AA+G+CFGG++VLDLAR         +  +L  VAS HG+  P           G  AG+   A  KVLV+H   DP   P QV
Sbjct:    3 IQTQTVEYKDGDVVLEGYFAWDDTNS--DRRPGVLIAHAWAGRSE-FEEGKAESLAELGYAGFALDLYGKGMRGSNAEENTALMQPLLDDRKTLQRRMTLALEQIRKQEIVDDSRVAAMGFCFGGLSVLDLAR---------TGAELSGVASFHGLFNPP----------GNTAGNKINA--KVLVMHGWDDPMAKPDQV 178          
BLAST of mRNA_H-canaliculatus_F_contig133.2699.1 vs. uniprot
Match: A0A127FB98_STEDE (Carboxymethylenebutenolidase n=1 Tax=Steroidobacter denitrificans TaxID=465721 RepID=A0A127FB98_STEDE)

HSP 1 Score: 119 bits (299), Expect = 6.860e-27
Identity = 77/200 (38.50%), Postives = 106/200 (53.00%), Query Frame = 3
Query:  468 IRRSVVEYNDGDTVLQGLCARPEGEDLPERLPGVILAHTAVGPQEDVILWKLDALALLGYVAFALDMFGAGRALWSRDESLAARRPITEDRSKMQDRATAAVQTLGRMEGVDEERLAAVGYCFGGMAVLDLARMVPPDVETNSSPKLRAVASLHGILAPILPDTGGRGGAGQAAGDAALAVPKVLVLHASADPFVPPTQV 1067
            IR  ++EY DGD  L+G     E    P  LP V+++H A G +++ +  K   LA  GY +FALDM+G GR   S +E+ +   P  +DR+ +  R  AA+  L  +  VD  R+AA+G+CFGG+ VLDLAR         S  +LR V S HG+L P    TG           AA  + K+L+LH   DP  PP  V
Sbjct:    3 IRERLIEYRDGDAGLEGFFCYDESRHQP--LPAVLISH-AWGGRDEFVERKARRLAYHGYASFALDMYGNGRRGSSPEENQSLMEPFMQDRALLSQRINAALAALKALPQVDPRRVAAMGFCFGGLCVLDLAR---------SGAELRGVVSFHGLLKP----TGLT---------AAKILSKILILHGYDDPLAPPQDV 177          
BLAST of mRNA_H-canaliculatus_F_contig133.2699.1 vs. uniprot
Match: UPI0020226BD3 (dienelactone hydrolase family protein n=1 Tax=Chroococcidiopsis sp. CCMEE 29 TaxID=155894 RepID=UPI0020226BD3)

HSP 1 Score: 120 bits (300), Expect = 9.850e-27
Identity = 81/202 (40.10%), Postives = 107/202 (52.97%), Query Frame = 3
Query:  468 IRRSVVEYNDGDTVLQGLCARPEGEDLPERLPGVILAH--TAVGPQEDVILWKLDALALLGYVAFALDMFGAGRALWSRDESLAARRPITEDRSKMQDRATAAVQTLGRMEGVDEERLAAVGYCFGGMAVLDLARMVPPDVETNSSPKLRAVASLHGILAPILPDTGGRGGAGQAAGDAALAVPKVLVLHASADPFVPPTQV 1067
            +R   VEY  G+TVL+G  A  +  ++  + PGV++ H  T VGP    +  + + LA LGYVAFA+DM+G G    +  E+ A  +    DR  M+DRA A +Q L + +  D +R+AA+GYCFGG  VL+LAR         S   L  V S HG L    P            GDA     KVLVLH + DP VPP QV
Sbjct:   25 VRTRTVEYKHGNTVLEGYLAYDD--EIKGQRPGVMVVHEWTGVGPY---VRQRAEQLAKLGYVAFAIDMYGKGIRPKNDQEAAAQAKIYRSDRKLMRDRANAGLQVLQKNQLTDTKRIAAIGYCFGGGTVLELAR---------SGANLAGVVSFHGNLDTPNP------------GDAKNIKGKVLVLHGANDPLVPPEQV 200          
BLAST of mRNA_H-canaliculatus_F_contig133.2699.1 vs. uniprot
Match: A0A419FEX8_9BACT (Dienelactone hydrolase family protein n=1 Tax=candidate division Zixibacteria bacterium TaxID=2053527 RepID=A0A419FEX8_9BACT)

HSP 1 Score: 119 bits (299), Expect = 1.410e-26
Identity = 82/217 (37.79%), Postives = 111/217 (51.15%), Query Frame = 3
Query:  468 IRRSVVEYNDGDTVLQGLCARPEGEDLPERLPGVILAHTAVGPQEDVILWKLDALALLGYVAFALDMFGAGRALWSRDESLAARRPITEDRSKMQDRATAAVQTLGRMEGVDEERLAAVGYCFGGMAVLDLARMVPPDVETNSSPKLRAVASLHGILAPILPDTGGRGGAGQAAGDAALAVPKVLVLHASADPFVPPTQVR--RKGHIRCCFSWKMI 1112
            + + +VEY  GDT ++G  A   G  L  + PGV++ H  +G  +D    + D LA LGYVAFA D++G G    +R+E+ A      +DR + + R  AA++ L   E VD ER+AA+GYCFGGM  L+LAR         S   L  V S HG L    P+             A     KVLVLH SADP VPP +V+  +K        W M+
Sbjct:   27 LHQEMVEYRVGDTTMEGYLAYDPG--LKGKRPGVLVFHEWMG-LDDYARRRADQLARLGYVAFAADIYGKGVRPANREEAAAQAGRFGQDREETRRRGAAALEVLQNREQVDAERIAAIGYCFGGMVALELAR---------SGADLAGVVSFHGSLNTPDPEA------------AENVKGKVLVLHGSADPSVPPEEVQAFQKAMNEAGVDWYMV 219          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig133.2699.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JKZ2_9PHAE4.850e-12363.86DLH domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A836CLU0_9STRA1.370e-4138.97Dienelactone hydrolase family protein n=1 Tax=Trib... [more]
A0A7S0HUL7_9CRYP6.780e-3846.46Hypothetical protein n=1 Tax=Hanusia phi TaxID=303... [more]
A0A7S1HA30_HEMAN5.130e-3349.37Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]
A0A7S2XY83_9STRA2.190e-3033.44Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A0G4EJ35_VITBC1.190e-2939.81DLH domain-containing protein n=1 Tax=Vitrella bra... [more]
A0A661FZ67_9GAMM1.970e-2739.00Carboxymethylenebutenolidase n=2 Tax=Gammaproteoba... [more]
A0A127FB98_STEDE6.860e-2738.50Carboxymethylenebutenolidase n=1 Tax=Steroidobacte... [more]
UPI0020226BD39.850e-2740.10dienelactone hydrolase family protein n=1 Tax=Chro... [more]
A0A419FEX8_9BACT1.410e-2637.79Dienelactone hydrolase family protein n=1 Tax=cand... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig133contigH-canaliculatus_F_contig133:52456..55698 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score361.7
Seed ortholog evalue3.8e-97
Seed eggNOG ortholog2880.D8LC04
EggNOG free text desc.Dienelactone hydrolase family
EggNOG OGs2SB8C@2759,COG0412@1
COG Functional cat.Q
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorysignal peptide
Exons5
Model size1940
Cds size1023
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929068.6669524-UTR-H-canaliculatus_F_contig133:52455..525471622929068.6669524-UTR-H-canaliculatus_F_contig133:52455..52547Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig133 52456..52547 +
1696845667.7516267-UTR-H-canaliculatus_F_contig133:52455..525471696845667.7516267-UTR-H-canaliculatus_F_contig133:52455..52547Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig133 52456..52547 +
1622929068.749165-UTR-H-canaliculatus_F_contig133:54873..556981622929068.749165-UTR-H-canaliculatus_F_contig133:54873..55698Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig133 54874..55698 +
1696845667.821474-UTR-H-canaliculatus_F_contig133:54873..556981696845667.821474-UTR-H-canaliculatus_F_contig133:54873..55698Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig133 54874..55698 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929068.6865058-CDS-H-canaliculatus_F_contig133:52547..527781622929068.6865058-CDS-H-canaliculatus_F_contig133:52547..52778Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig133 52548..52778 +
1696845667.766474-CDS-H-canaliculatus_F_contig133:52547..527781696845667.766474-CDS-H-canaliculatus_F_contig133:52547..52778Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig133 52548..52778 +
1622929068.6992052-CDS-H-canaliculatus_F_contig133:53025..533051622929068.6992052-CDS-H-canaliculatus_F_contig133:53025..53305Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig133 53026..53305 +
1696845667.7752526-CDS-H-canaliculatus_F_contig133:53025..533051696845667.7752526-CDS-H-canaliculatus_F_contig133:53025..53305Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig133 53026..53305 +
1622929068.7137797-CDS-H-canaliculatus_F_contig133:53631..537801622929068.7137797-CDS-H-canaliculatus_F_contig133:53631..53780Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig133 53632..53780 +
1696845667.7833705-CDS-H-canaliculatus_F_contig133:53631..537801696845667.7833705-CDS-H-canaliculatus_F_contig133:53631..53780Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig133 53632..53780 +
1622929068.7262433-CDS-H-canaliculatus_F_contig133:54116..541901622929068.7262433-CDS-H-canaliculatus_F_contig133:54116..54190Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig133 54117..54190 +
1696845667.7944074-CDS-H-canaliculatus_F_contig133:54116..541901696845667.7944074-CDS-H-canaliculatus_F_contig133:54116..54190Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig133 54117..54190 +
1622929068.7373447-CDS-H-canaliculatus_F_contig133:54584..548731622929068.7373447-CDS-H-canaliculatus_F_contig133:54584..54873Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig133 54585..54873 +
1696845667.8113828-CDS-H-canaliculatus_F_contig133:54584..548731696845667.8113828-CDS-H-canaliculatus_F_contig133:54584..54873Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig133 54585..54873 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig133.2699.1prot_H-canaliculatus_F_contig133.2699.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig133 52548..54873 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig133.2699.1

>prot_H-canaliculatus_F_contig133.2699.1 ID=prot_H-canaliculatus_F_contig133.2699.1|Name=mRNA_H-canaliculatus_F_contig133.2699.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=341bp
MYRSVAQVATLFFSLPSARGWLHGIRSNSFSHGYGKIFRSTLAMSSSERT
SIETIKVEELWPNLAGKQTCASEHAGKIIREAWAADLRHSPIRDGDKRTR
RSAASNTVSKEDTTNDGRSSSVSWSIRRSVVEYNDGDTVLQGLCARPEGE
DLPERLPGVILAHTAVGPQEDVILWKLDALALLGYVAFALDMFGAGRALW
SRDESLAARRPITEDRSKMQDRATAAVQTLGRMEGVDEERLAAVGYCFGG
MAVLDLARMVPPDVETNSSPKLRAVASLHGILAPILPDTGGRGGAGQAAG
DAALAVPKVLVLHASADPFVPPTQVRRKGHIRCCFSWKMI*
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mRNA from alignment at H-canaliculatus_F_contig133:52456..55698+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig133.2699.1 ID=mRNA_H-canaliculatus_F_contig133.2699.1|Name=mRNA_H-canaliculatus_F_contig133.2699.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=3243bp|location=Sequence derived from alignment at H-canaliculatus_F_contig133:52456..55698+ (Hapterophycus canaliculatus Oshoro5f female)
CTTGGTCTGGTTCTCTTTTGTCTCATCTCTCATCTCTCATCTCCTCGTTT GCGTCTTTGCGTCCCTCGCAGCTCCTCACCTCTCGACTTGGCATGTACCG AAGCGTAGCCCAGGTGGCGACGCTGTTTTTTTCTTTGCCCTCAGCCAGAG GCTGGCTGCATGGAATCAGGTCGAACTCCTTCAGTCACGGCTACGGCAAA ATATTTCGAAGCACTCTCGCAATGTCTTCGTCTGAGCGTACAAGTATCGA GACTATCAAAGTTGAGGAGCTTTGGCCAAACCTGGCAGGCAAGCAGACCT GCGCCAGCGAGCATGCTGGAAAGGTGAGTGGGGCACTTTTGAGTGCGATG TTGGTTGAGTGTTGAGCTTACCCCGCCCACCAAAGAACGATCTACGCTCT CGGACATGTCCTCCGGCCGCGATCGCGAAAACATGTGTCGGCCTCGTAAC TTCTCCGGCCAACCGCTGTGGCCAGGCCTTGAGCCGCCGCCTGCTTCGGG TGTAATATCCAATCAAAACAACAATAAAATTCCTATCGCTCTCTTTGCTA TGTCAAACGCCGCATGGTAGATTATCAGAGAAGCGTGGGCGGCAGACCTC CGACATTCACCAATCAGAGACGGCGATAAACGGACCAGGAGAAGTGCCGC ATCGAACACCGTCTCCAAGGAGGACACAACAAATGATGGACGCTCTTCTT CTGTCTCTTGGAGCATCAGGCGCAGCGTCGTGGAGTACAACGATGGAGAC ACGGTCCTGCAAGGGCTATGCGCACGCCCCGAGGGCGAGGACCTTCCAGA GAGGCTTCCGGGCGTCATTCTCGCCCACACCGCGGTGGGCCCGCAGGAAG GCAAGGGAGAGGTGTCGGCCAATTGCCTCGTGGGTCGATCAGGATTCTGA GGTATTCCTGTCCACAAGTCCTCGAGTGTGGTGCCGCATTTCAGCTAACG TGGCGGGGGGGGAATATATATTTGTGCCGTTCTACTTGTGATAGCTGTTT TGTGTGAACAAGACTTCGTTCCCAGGACGGGAATCGAATCTCCCCCTCGA AGACGGACAGCTTCCGCCCTACCTCCAGCCGATCCTTGCAGGAGTCCTAT TTCAAACCGTCTGTTCCTGTCATTTTACGATATTTTTCAGATCCCCTCCT TACTTCGCCGCTCCAATCCAAACCAGATGTGATCCTTTGGAAACTGGATG CTCTCGCCCTGCTCGGCTACGTAGCGTTCGCGTTGGACATGTTCGGCGCT GGCCGTGCTCTGTGGAGCCGCGATGAGTCCCTGGCTGCAAGGAGGCCCAT CACGGAGGACCGATCAAAGATGCAGGCATGACAGCGGCTCTTCCGATACG CCACGTGGTGGCGGTTGAAACGGCTTGGGAAAAGCGACAAATCGTACGAG AAAATCGCGGGAGTTTCGATGTGGTTCGTCAAAAGTTCTCGAGACGACTG CATGCCGGGTGCTGGCATCCAAGCGGCAAGATTGCACAGCAACGAGCCCT AACCTCGTTCTTGCTGAGGGTCCCGCTAGACGCCATATTGCTGACAATGC AGAGTCGGCGTTCTCGTGATTCCGTAGGTTGGGTGAGTGTATGAGCGTAG TTCCGGTATCTCATCGCTTTCTTCTTCCTTCTACTCCACATCTCCGCGTG GCACGACGCAGGACCGGGCAACCGCGGCTGTCCAGACCCTCGGTCGGATG GAGGGGGTCGACGAGGAGAGACTGGCGGCGGTGGGGTGAGTCAGCTCTGA CAGGCGCTGTTCGGTTCCCCGACTGAAGCGTCCCTCAGGACTGTACGCCC GGCGGCTCCTCCTCCAAATTGTGGTCGCACTCGTGGCACAGAGCATGAAT GAAGCGCAGCAATAGCAAGTTGAACGCATGTTCGGTTTCCAAAGGGAAAG TACGGCAACGGCACCCCATGATTTACGGTACCCAGACGACTGTCGCACGA AAGAGCTGAGCCATTAGGCTATCGACGCACATGCCACGGTGAATCGACCG TACGTCATCTTGCGAATCCATGCTGTGACTGTAATTTTAACGATGCGCAC TCTTGACAAGAATTGCGCAGGATGTGCGTTCGATGTATCTACCACGATTG ATTTCGGCGTTTCTGGCCTCCTCCAGCAGGTATTGCTTCGGTGGCATGGC CGTGTTGGATCTTGCGAGGATGGTGCCCCCTGACGTTGAAACAAACAGCT CTCCGAAGCTTAGAGCCGTGGCGTCACTGCATGGGATTCTGGCGCCGATT TTGCCTGACACTGGTGGACGGGGTGGGGCTGGCCAAGCGGCGGGTGACGC TGCGCTTGCGGTACCGAAAGTGCTGGTGTTGCATGCGTCAGCAGATCCTT TCGTGCCGCCAACGCAGGTCAGGCGAAAAGGACATATACGGTGCTGTTTT TCGTGGAAGATGATATAGCCAATGGGATTTTAAGGTTCGATTCCGTCAAT CAGCGGGCTTGACAGGGCTTACCACCAACAAACCCTTCCTACTCCCCACC CTCTACCCGATCGCCCGCTGACTCGTCGACCAGGTACAAGCTTTCGAGGA AGAGTTTCGGAACCGAGGGGCCGATCTCACTATCATCGAATACGGCGGCG ATGCTTTGCATGCCTTTACTCGACCCGAGAAGACTACCCCGATCGACAAG GAAGCAGGGTTGTCGTACTGCAAGCGTGCCGACGATGACTCGTGGCGGCG AGTCGTCGACCTACTTCGGGAAGAACTGCGGGACGCTTGAGATATATCGC TTGTTTCGGATTGTACTTGTACTGCCTGATTGTTCTTTGATCGGCCGAGG GAGATACTCAACGGAATGGGGTTGTGAACTCGCCACGACAATTCAGAAAA CAGAAATGTTTGGCTCCGAAAATAGCCTCATTTTCGAGGGAGACGAACCG TAGACAGCATGAGGTGTGTCAACGCCCCGGCATGCATAATTGCAGCGGAA ACCTGGCGATCACCGCCTCAGACGTGCCGAAGACCAACTCGTGCTCACTC ATGAGAATCGCCCCCACGGCTCCGGCGGCGCCCCTTACGCCTCCCACGCA TTCCCATCTCCGGGTTTGTTCTTGCTGCTCGTTTTCCCTACTGGGTCTCT CATCCTTCCTGTAGATGTCGCCGCCGTCGTTAACATCACCAAAGCTTTTT GTCGGTGCCCAAAGTTTGATGGTCGCATCCCCCCCACCGGTCGCAAAGGC GCCGGAGAGAAACGAGCTGTCCACTGCCCACACCCCATGCCTG
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig133:52456..55698+

>mRNA_H-canaliculatus_F_contig133.2699.1 ID=mRNA_H-canaliculatus_F_contig133.2699.1|Name=mRNA_H-canaliculatus_F_contig133.2699.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=2046bp|location=Sequence derived from alignment at H-canaliculatus_F_contig133:52456..55698+ (Hapterophycus canaliculatus Oshoro5f female)
ATGTACCGAAGCGTAGCCCAGGTGGCGACGCTGTTTTTTTCTTTGCCCTC
AGCCAGAGGCTGGCTGCATGGAATCAGGTCGAACTCCTTCAGTCACGGCT
ACGGCAAAATATTTCGAAGCACTCTCGCAATGTCTTCGTCTGAGCGTACA
AGTATCGAGACTATCAAAGTTGAGGAGCTTTGGCCAAACCTGGCAGGCAA
GCAGACCTGCGCCAGCGAGCATGCTGGAAAGATGTACCGAAGCGTAGCCC
AGGTGGCGACGCTGTTTTTTTCTTTGCCCTCAGCCAGAGGCTGGCTGCAT
GGAATCAGGTCGAACTCCTTCAGTCACGGCTACGGCAAAATATTTCGAAG
CACTCTCGCAATGTCTTCGTCTGAGCGTACAAGTATCGAGACTATCAAAG
TTGAGGAGCTTTGGCCAAACCTGGCAGGCAAGCAGACCTGCGCCAGCGAG
CATGCTGGAAAGATTATCAGAGAAGCGTGGGCGGCAGACCTCCGACATTC
ACCAATCAGAGACGGCGATAAACGGACCAGGAGAAGTGCCGCATCGAACA
CCGTCTCCAAGGAGGACACAACAAATGATGGACGCTCTTCTTCTGTCTCT
TGGAGCATCAGGCGCAGCGTCGTGGAGTACAACGATGGAGACACGGTCCT
GCAAGGGCTATGCGCACGCCCCGAGGGCGAGGACCTTCCAGAGAGGCTTC
CGGGCGTCATTCTCGCCCACACCGCGGTGGGCCCGCAGGAAGATTATCAG
AGAAGCGTGGGCGGCAGACCTCCGACATTCACCAATCAGAGACGGCGATA
AACGGACCAGGAGAAGTGCCGCATCGAACACCGTCTCCAAGGAGGACACA
ACAAATGATGGACGCTCTTCTTCTGTCTCTTGGAGCATCAGGCGCAGCGT
CGTGGAGTACAACGATGGAGACACGGTCCTGCAAGGGCTATGCGCACGCC
CCGAGGGCGAGGACCTTCCAGAGAGGCTTCCGGGCGTCATTCTCGCCCAC
ACCGCGGTGGGCCCGCAGGAAGATGTGATCCTTTGGAAACTGGATGCTCT
CGCCCTGCTCGGCTACGTAGCGTTCGCGTTGGACATGTTCGGCGCTGGCC
GTGCTCTGTGGAGCCGCGATGAGTCCCTGGCTGCAAGGAGGCCCATCACG
GAGGACCGATCAAAGATGCAGATGTGATCCTTTGGAAACTGGATGCTCTC
GCCCTGCTCGGCTACGTAGCGTTCGCGTTGGACATGTTCGGCGCTGGCCG
TGCTCTGTGGAGCCGCGATGAGTCCCTGGCTGCAAGGAGGCCCATCACGG
AGGACCGATCAAAGATGCAGGACCGGGCAACCGCGGCTGTCCAGACCCTC
GGTCGGATGGAGGGGGTCGACGAGGAGAGACTGGCGGCGGTGGGGACCGG
GCAACCGCGGCTGTCCAGACCCTCGGTCGGATGGAGGGGGTCGACGAGGA
GAGACTGGCGGCGGTGGGGTATTGCTTCGGTGGCATGGCCGTGTTGGATC
TTGCGAGGATGGTGCCCCCTGACGTTGAAACAAACAGCTCTCCGAAGCTT
AGAGCCGTGGCGTCACTGCATGGGATTCTGGCGCCGATTTTGCCTGACAC
TGGTGGACGGGGTGGGGCTGGCCAAGCGGCGGGTGACGCTGCGCTTGCGG
TACCGAAAGTGCTGGTGTTGCATGCGTCAGCAGATCCTTTCGTGCCGCCA
ACGCAGGTCAGGCGAAAAGGACATATACGGTGCTGTTTTTCGTGGAAGAT
GATATAGGTATTGCTTCGGTGGCATGGCCGTGTTGGATCTTGCGAGGATG
GTGCCCCCTGACGTTGAAACAAACAGCTCTCCGAAGCTTAGAGCCGTGGC
GTCACTGCATGGGATTCTGGCGCCGATTTTGCCTGACACTGGTGGACGGG
GTGGGGCTGGCCAAGCGGCGGGTGACGCTGCGCTTGCGGTACCGAAAGTG
CTGGTGTTGCATGCGTCAGCAGATCCTTTCGTGCCGCCAACGCAGGTCAG
GCGAAAAGGACATATACGGTGCTGTTTTTCGTGGAAGATGATATAG
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