mRNA_H-canaliculatus_F_contig133.2694.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig133.2694.1
Unique NamemRNA_H-canaliculatus_F_contig133.2694.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
[Close]
BLAST of mRNA_H-canaliculatus_F_contig133.2694.1 vs. uniprot
Match: D8LC10_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LC10_ECTSI)

HSP 1 Score: 456 bits (1174), Expect = 8.760e-152
Identity = 253/295 (85.76%), Postives = 263/295 (89.15%), Query Frame = 1 
Query:   88 MVRSSAIPAALVVLASSSCTAFVAPLVTRVSTAPTTTSMSLKAPGGRPSSPINKAAGVVSKALFGRPGGVRMGNNNGDGMIGXXXXXXXXXG-HGSFDDGEEDG-GMDALAMMGVLAAIKDTTGGAWDAYNGALADKPILVKACTSLVGFSIGDFLAQKGTSKDKFSYERLARMAAFGFLFHGTISHFFYNALDSALPGTAAFTVIQKVVIDQVFWAPIFTLIFFTWIGITSGASPSEIVAKVKSDLVQGVVGSWTVWPLAHTINFKYVPTEQRLLYINSIQIFYNVFLSIIGSK 966
            MVR SA+PAALV L SSSCTAFV PLVTRV  AP+TTSMSLK P GR SSPINKAA VV KALFGRPGGV+MGN        XXXXXXXXX   GSFDD EE+G GMDALAM+GVLA +KD  GGAWDAYN ALADKPILVKACTS VGFSIGDFLAQKGTSK+ FSY RLARMAAFGFLFHGTISHFFYNALDSALPGTAA TVIQKV+IDQVFWAPIFTLIFFTWIG+TSGASPSEIVAKVKSDLVQGVVGSWTVWPLAHTINFK+VPTEQRLLYINSIQIFYNVFLSIIGSK
Sbjct:    1 MVRCSALPAALVALGSSSCTAFVTPLVTRVPVAPSTTSMSLKGPAGRSSSPINKAASVVGKALFGRPGGVKMGNXXXXXXXXXXXXXXXXXXXQGSFDDNEEEGRGMDALAMLGVLATVKDGAGGAWDAYNSALADKPILVKACTSFVGFSIGDFLAQKGTSKESFSYARLARMAAFGFLFHGTISHFFYNALDSALPGTAAMTVIQKVIIDQVFWAPIFTLIFFTWIGVTSGASPSEIVAKVKSDLVQGVVGSWTVWPLAHTINFKFVPTEQRLLYINSIQIFYNVFLSIIGSK 295
[Close]
BLAST of mRNA_H-canaliculatus_F_contig133.2694.1 vs. uniprot
Match: A0A836CE62_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CE62_9STRA)

HSP 1 Score: 256 bits (655), Expect = 5.020e-75
Identity = 124/200 (62.00%), Postives = 151/200 (75.50%), Query Frame = 1 
Query:  367 GSFDDGEEDGGMDALAMMGVLAAIKDTTGGAWDAYNGALADKPILVKACTSLVGFSIGDFLAQKGTSK-DKFSYERLARMAAFGFLFHGTISHFFYNALDSALPGTAAFTVIQKVVIDQVFWAPIFTLIFFTWIGITSGASPSEIVAKVKSDLVQGVVGSWTVWPLAHTINFKYVPTEQRLLYINSIQIFYNVFLSIIGS 963
            G F++ + +  M ALA MGVL  +       WD+YN  L +KPIL KACTSLVGFS+GD LAQK  +K ++F Y+RLARMAAFGF+FHGTISHFFYN LD  +PG     + QKV  DQV WAPIFT ++ TW+G+TSG SP E+  K+K+DLV+GVVGSW+VWPL H I FK+VP EQRLLYIN IQI YNVFLS++GS
Sbjct:   91 GEFEEEDGNDAMIALAAMGVLGDL-------WDSYNKVLGEKPILTKACTSLVGFSVGDTLAQKFVAKGERFDYQRLARMAAFGFMFHGTISHFFYNKLDEVIPGKTPLAIAQKVFTDQVLWAPIFTFVYLTWMGVTSGLSPPEVGEKIKTDLVKGVVGSWSVWPLVHAIGFKFVPLEQRLLYINCIQIGYNVFLSVLGS 283
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BLAST of mRNA_H-canaliculatus_F_contig133.2694.1 vs. uniprot
Match: A0A7S2FYX3_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FYX3_9STRA)

HSP 1 Score: 213 bits (543), Expect = 1.020e-59
Identity = 107/192 (55.73%), Postives = 135/192 (70.31%), Query Frame = 1 
Query:  394 GGMDALAMMGVLAAIKDTTGGAWDAYNGALADKPILVKACTSLVGFSIGDFLAQKGTSKD-KFSYERLARMAAFGFLFHGTISHFFYNALDSALPGTAAFTVIQKVVIDQVFWAPIFTLIFFTWIGITSGASPSEIVAKVKSDLVQGVVGSWTVWPLAHTINFKYVPTEQRLLYINSIQIFYNVFLSIIGSK 966
            GG++A A  G   A +D  G  W AYN  L   PIL KA TS++GF++GD LAQ    K  ++   R  R+A+FGFL HGT  H+FY  LD A+PGT A  V  KV IDQV W PIF ++FF+++G T+G  P+ + AKVK DL+  V GSWTVWP+AH INF+++PT QRLLYIN+IQIFYNVFLSIIG+K
Sbjct:   64 GGLNADASGGDGDAKEDGQG-LWAAYNNKLETNPILTKALTSMIGFTLGDILAQNFVEKKGEYDIMRTIRLASFGFLIHGTTGHWFYGKLDKAIPGTGAMQVFSKVGIDQVLWNPIFGVMFFSYMGFTNGDGPAAVAAKVKRDLMTQVTGSWTVWPIAHAINFRFIPTSQRLLYINTIQIFYNVFLSIIGNK 254
[Close]
BLAST of mRNA_H-canaliculatus_F_contig133.2694.1 vs. uniprot
Match: A0A835Z5E2_9STRA (Peroxisomal membrane protein-related n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5E2_9STRA)

HSP 1 Score: 209 bits (533), Expect = 2.870e-59
Identity = 102/172 (59.30%), Postives = 126/172 (73.26%), Query Frame = 1 
Query:  454 GAWDAYNGALADKPILVKACTSLVGFSIGDFLAQKGTSKD-KFSYERLARMAAFGFLFHGTISHFFYNALDSALPGTAAFTVIQKVVIDQVFWAPIFTLIFFTWIGITSGASPSEIVAKVKSDLVQGVVGSWTVWPLAHTINFKYVPTEQRLLYINSIQIFYNVFLSIIGSK 966
            G W AYN AL  +P+LVKACTSL GF++GD LAQK  +KD ++ + R  R+ +FG L HG   H+FY  LDS LPGTA  TV  KV IDQ  W PIF ++FF+++G+T G S  +I  K+K+DL   V+GSWTVW  AHTINFK+VPT QRLLYINSIQI YNVFLS +G+K
Sbjct:    3 GIWAAYNRALTAQPLLVKACTSLTGFTVGDILAQKFINKDAEYDFMRTVRLGSFGALVHGPTGHWFYGMLDSKLPGTAPMTVATKVAIDQTIWNPIFGIMFFSYLGLTEGKSVDQIYQKIKADLATAVMGSWTVWIPAHTINFKFVPTSQRLLYINSIQIGYNVFLSFLGNK 174
[Close]
BLAST of mRNA_H-canaliculatus_F_contig133.2694.1 vs. uniprot
Match: A0A5J4YL21_PORPP (Protein sym-1 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YL21_PORPP)

HSP 1 Score: 207 bits (528), Expect = 4.370e-57
Identity = 101/171 (59.06%), Postives = 121/171 (70.76%), Query Frame = 1 
Query:  460 WDAYNGALADKPILVKACTSLVGFSIGDFLAQK--GTSKDKFSYERLARMAAFGFLFHGTISHFFYNALDSALPGTAAFTVIQKVVIDQVFWAPIFTLIFFTWIGITSGASPSEIVAKVKSDLVQGVVGSWTVWPLAHTINFKYVPTEQRLLYINSIQIFYNVFLSIIGSK 966
            W AYN AL  +P+L+KA TS VGFS+GD LAQK  G         RL RMAAFGFL HG   H+FY ALD A+PGT A+ V  KV IDQ+ WAPIFT++FF +IG   G S  +I  KVK D   GV GSW VWPL HTINF+++P+ QRLLYIN+IQI YN+FLS+I +K
Sbjct:  117 WKAYNSALEAQPLLIKAMTSFVGFSLGDILAQKFLGPKNAALDMNRLGRMAAFGFLIHGPTGHYFYGALDRAIPGTEAWKVASKVAIDQILWAPIFTVMFFAFIGAMEGRSVDDIKQKVKRDTWTGVTGSWKVWPLVHTINFRFIPSSQRLLYINTIQIAYNMFLSLIANK 287
[Close]
BLAST of mRNA_H-canaliculatus_F_contig133.2694.1 vs. uniprot
Match: A0A835Z9Q4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9Q4_9STRA)

HSP 1 Score: 207 bits (528), Expect = 7.420e-57
Identity = 104/189 (55.03%), Postives = 129/189 (68.25%), Query Frame = 1 
Query:  403 DALAMMGVLAAIKDTTGGAWDAYNGALADKPILVKACTSLVGFSIGDFLAQKGTSK-DKFSYERLARMAAFGFLFHGTISHFFYNALDSALPGTAAFTVIQKVVIDQVFWAPIFTLIFFTWIGITSGASPSEIVAKVKSDLVQGVVGSWTVWPLAHTINFKYVPTEQRLLYINSIQIFYNVFLSIIGSK 966
            D     G L AI       W AYN +L  +PIL KA TS++GF +GDFLAQK  SK +K  +ERL RMA+FG L HGT  HFFY  LDS +PGTAA TV  KV IDQ  W PIF  +FF ++G   G SPS + A+++++L   V GSWTVWP+AH INF+ +PT QRLLYINS+QI YN+FLSI+  +
Sbjct:  106 DGKKKAGGLMAI-------WAAYNNSLDKRPILTKALTSMIGFGLGDFLAQKFISKSEKIDWERLGRMASFGLLIHGTTGHFFYGMLDSKIPGTAALTVATKVFIDQAIWNPIFGCMFFGYMGFAEGLSPSAVKARIQNNLWASVKGSWTVWPVAHAINFRCIPTSQRLLYINSVQIGYNMFLSILSQR 287
[Close]
BLAST of mRNA_H-canaliculatus_F_contig133.2694.1 vs. uniprot
Match: A0A7S0BQD5_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BQD5_9RHOD)

HSP 1 Score: 205 bits (522), Expect = 1.260e-56
Identity = 101/168 (60.12%), Postives = 120/168 (71.43%), Query Frame = 1 
Query:  460 WDAYNGALADKPILVKACTSLVGFSIGDFLAQKGTSKDKFSYERLARMAAFGFLFHGTISHFFYNALDSALPGTAAFTVIQKVVIDQVFWAPIFTLIFFTWIGITSGASPSEIVAKVKSDLVQGVVGSWTVWPLAHTINFKYVPTEQRLLYINSIQIFYNVFLSIIGS 963
            W AYN  L  +PIL KA TSLVGF++GD LAQK    ++F Y+RL RMAAFG LFHG   H+FY  LD  + GT    VI KV IDQ+ WAPIF + FF  +G   G S  EI AK+++DLV  V  SW VWPLAH INF+++PTEQRLLYIN+IQI YNVFLSIIG+
Sbjct:   90 WAAYNSLLETQPILTKALTSLVGFAVGDLLAQKYLGDEEFKYDRLLRMAAFGALFHGPTGHYFYGFLDRLIVGTEPLKVISKVAIDQLLWAPIFGVAFFGILGAMEGKSVKEIKAKIENDLVTAVTTSWKVWPLAHAINFRFIPTEQRLLYINAIQIGYNVFLSIIGN 257
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BLAST of mRNA_H-canaliculatus_F_contig133.2694.1 vs. uniprot
Match: D8LGB2_ECTSI (Peroxisomal membrane protein-related n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGB2_ECTSI)

HSP 1 Score: 201 bits (512), Expect = 4.410e-56
Identity = 99/185 (53.51%), Postives = 127/185 (68.65%), Query Frame = 1 
Query:  454 GAWDAYNGALADKPILVKACTSLVGFSIGDFLAQKGTS-KDKFSYERLARMAAFGFLFHGTISHFFYNALDSALPGTAAFTVIQKVVIDQVFWAPIFTLIFFTWIGITSGASPSEIVAKVKSDLVQGVVGSWTVWPLAHTINFKYVPTEQRLLYINSIQIFYNVFLSIIGSK*REQNPLKYEIRP 1005
            G W AYN ALA +P+LVKA TS  GF++GD LAQK  S +D + + R  R+  FG L HG   H+FY  LD+ LPGT   TV  KV IDQ  W PIF ++FFT++G+  G S  +I  K+K+DL   V+GSWTVW  AHTINFK+VPT QRLLYIN+IQI YN+FLS +G+K  + + +K  + P
Sbjct:    3 GIWAAYNKALAAQPLLVKAMTSFTGFTVGDILAQKFISPEDDYDFMRTLRLGTFGALVHGPTGHYFYGMLDAKLPGTKPMTVASKVAIDQTIWNPIFGVMFFTYLGLAEGKSVDDIQKKIKNDLATAVMGSWTVWIPAHTINFKFVPTSQRLLYINTIQIGYNIFLSFLGNKKADDDSVKSALVP 187
[Close]
BLAST of mRNA_H-canaliculatus_F_contig133.2694.1 vs. uniprot
Match: A0A7S1UKV6_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UKV6_9STRA)

HSP 1 Score: 202 bits (513), Expect = 4.990e-56
Identity = 98/173 (56.65%), Postives = 126/173 (72.83%), Query Frame = 1 
Query:  451 GGAWDAYNGALADKPILVKACTSLVGFSIGDFLAQKGTSK-DKFSYERLARMAAFGFLFHGTISHFFYNALDSALPGTAAFTVIQKVVIDQVFWAPIFTLIFFTWIGITSGASPSEIVAKVKSDLVQGVVGSWTVWPLAHTINFKYVPTEQRLLYINSIQIFYNVFLSIIGSK 966
            GG WD YN AL   P++VK  TSLVGFS+GD LAQ    K +KF + RLAR+A+FGFL HGT+ H+FY  LD   PGT A TV  KV IDQV + P+F  IFFT++G+ +G S  ++ AK++ D+   VVGSWTVW  AHTINFK++  +QRLLYIN++QI YN+FLS +G+K
Sbjct:   43 GGLWDKYNAALEANPLIVKCLTSLVGFSLGDILAQLFVEKVEKFDFARLARLASFGFLLHGTMGHYFYGFLDGKFPGTNAATVATKVGIDQVLFNPVFGSIFFTYMGLAAGDSLGDVKAKIQRDIKTAVVGSWTVWVPAHTINFKFISPQQRLLYINTVQIGYNIFLSFLGNK 215
[Close]
BLAST of mRNA_H-canaliculatus_F_contig133.2694.1 vs. uniprot
Match: A0A7S2XWX9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XWX9_9STRA)

HSP 1 Score: 202 bits (514), Expect = 4.170e-55
Identity = 95/169 (56.21%), Postives = 119/169 (70.41%), Query Frame = 1 
Query:  460 WDAYNGALADKPILVKACTSLVGFSIGDFLAQKGTSK-DKFSYERLARMAAFGFLFHGTISHFFYNALDSALPGTAAFTVIQKVVIDQVFWAPIFTLIFFTWIGITSGASPSEIVAKVKSDLVQGVVGSWTVWPLAHTINFKYVPTEQRLLYINSIQIFYNVFLSIIGS 963
            W AYN AL   PI  KA TSLVGFS+GD LAQK  S  + F + R+AR+A+FG LFHG + H+FY  LD+ +PGTA   V  KV IDQ+ W PIF   F  ++G   G +  E+  K+K+DLV+ V GSWTVWP+AH INF+++PT QRLLYINSIQ+FYN FLS + S
Sbjct:  118 WAAYNAALESSPITTKALTSLVGFSLGDILAQKFLSAGEPFDFLRMARLASFGLLFHGPVGHYFYGFLDTKIPGTALSVVASKVAIDQIIWNPIFGTFFLGYMGFAEGKNAGEVGQKIKNDLVKAVTGSWTVWPIAHAINFRFIPTSQRLLYINSIQVFYNCFLSFLAS 286
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig133.2694.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LC10_ECTSI8.760e-15285.76Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CE62_9STRA5.020e-7562.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2FYX3_9STRA1.020e-5955.73Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A835Z5E2_9STRA2.870e-5959.30Peroxisomal membrane protein-related n=1 Tax=Tribo... [more]
A0A5J4YL21_PORPP4.370e-5759.06Protein sym-1 n=1 Tax=Porphyridium purpureum TaxID... [more]
A0A835Z9Q4_9STRA7.420e-5755.03Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S0BQD5_9RHOD1.260e-5660.12Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
D8LGB2_ECTSI4.410e-5653.51Peroxisomal membrane protein-related n=1 Tax=Ectoc... [more]
A0A7S1UKV6_9STRA4.990e-5656.65Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A7S2XWX9_9STRA4.170e-5556.21Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig133contigH-canaliculatus_F_contig133:4781..9261 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score459.1
Seed ortholog evalue1.5e-126
Seed eggNOG ortholog2880.D8LC10
KEGG koko:K13348
KEGG Pathwayko04146,map04146
EggNOG free text desc.Belongs to the peroxisomal membrane protein PXMP2 4 family
EggNOG OGsKOG1944@1,KOG1944@2759
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001
Hectar predicted targeting categorychloroplast
Ec32 ortholog descriptionMpv17/PMP22
Ec32 orthologEc-20_004020.1
Exons4
Model size2617
Cds size882
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig133.2694.1prot_H-canaliculatus_F_contig133.2694.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig133 6429..9174 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929067.2809012-UTR-H-canaliculatus_F_contig133:4780..64281622929067.2809012-UTR-H-canaliculatus_F_contig133:4780..6428Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig133 4781..6428 -
1696845667.266465-UTR-H-canaliculatus_F_contig133:4780..64281696845667.266465-UTR-H-canaliculatus_F_contig133:4780..6428Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig133 4781..6428 -
1622929067.374221-UTR-H-canaliculatus_F_contig133:9174..92611622929067.374221-UTR-H-canaliculatus_F_contig133:9174..9261Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig133 9175..9261 -
1696845667.3266103-UTR-H-canaliculatus_F_contig133:9174..92611696845667.3266103-UTR-H-canaliculatus_F_contig133:9174..9261Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig133 9175..9261 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929067.2987216-CDS-H-canaliculatus_F_contig133:6428..66921622929067.2987216-CDS-H-canaliculatus_F_contig133:6428..6692Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig133 6429..6692 -
1696845667.2808306-CDS-H-canaliculatus_F_contig133:6428..66921696845667.2808306-CDS-H-canaliculatus_F_contig133:6428..6692Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig133 6429..6692 -
1622929067.3195288-CDS-H-canaliculatus_F_contig133:7369..75671622929067.3195288-CDS-H-canaliculatus_F_contig133:7369..7567Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig133 7370..7567 -
1696845667.2905433-CDS-H-canaliculatus_F_contig133:7369..75671696845667.2905433-CDS-H-canaliculatus_F_contig133:7369..7567Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig133 7370..7567 -
1622929067.3375602-CDS-H-canaliculatus_F_contig133:8190..84271622929067.3375602-CDS-H-canaliculatus_F_contig133:8190..8427Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig133 8191..8427 -
1696845667.303014-CDS-H-canaliculatus_F_contig133:8190..84271696845667.303014-CDS-H-canaliculatus_F_contig133:8190..8427Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig133 8191..8427 -
1622929067.3590424-CDS-H-canaliculatus_F_contig133:8991..91741622929067.3590424-CDS-H-canaliculatus_F_contig133:8991..9174Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig133 8992..9174 -
1696845667.3154156-CDS-H-canaliculatus_F_contig133:8991..91741696845667.3154156-CDS-H-canaliculatus_F_contig133:8991..9174Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig133 8992..9174 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig133.2694.1

>prot_H-canaliculatus_F_contig133.2694.1 ID=prot_H-canaliculatus_F_contig133.2694.1|Name=mRNA_H-canaliculatus_F_contig133.2694.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=294bp
MVRSSAIPAALVVLASSSCTAFVAPLVTRVSTAPTTTSMSLKAPGGRPSS
PINKAAGVVSKALFGRPGGVRMGNNNGDGMIGGGNNNNDDNGHGSFDDGE
EDGGMDALAMMGVLAAIKDTTGGAWDAYNGALADKPILVKACTSLVGFSI
GDFLAQKGTSKDKFSYERLARMAAFGFLFHGTISHFFYNALDSALPGTAA
FTVIQKVVIDQVFWAPIFTLIFFTWIGITSGASPSEIVAKVKSDLVQGVV
GSWTVWPLAHTINFKYVPTEQRLLYINSIQIFYNVFLSIIGSK*
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mRNA from alignment at H-canaliculatus_F_contig133:4781..9261-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig133.2694.1 ID=mRNA_H-canaliculatus_F_contig133.2694.1|Name=mRNA_H-canaliculatus_F_contig133.2694.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=4481bp|location=Sequence derived from alignment at H-canaliculatus_F_contig133:4781..9261- (Hapterophycus canaliculatus Oshoro5f female)
GACGCACACACAACTACCGCTGCAGTTCCCCAGCACTGAACAACGGCGTG
CACCCACAACCCCTTTACTCCTTCCCTCTCTTACAAGATGGTTCGGTCGT
CCGCTATCCCCGCGGCCCTTGTGGTTCTTGCATCGTCTTCATGCACGGCT
TTTGTAGCCCCCCTTGTGACCCGCGTCTCCACCGCGCCGACGACAACAAG
CATGTCACTGAAGGCCCCTGGAGGACGCCCTTCTTCTCCCATCAACAAGG
CGGCTGGAGTTGTCAGCAAGGTGAAGGATCATCATTCTTGCCGCTGCCAT
TCCTGCTCGAGTCGTAGAACCCACTCCTCGCTGCTGCAGGAGCATGTTGC
AACATCGACCTGCCCCGGGTTGTACTCCTCGGAATTTCGCGCCAACTCCC
TCCAGGAAGAGACAGGCAGGAGGCGCCTCTTCTGATTGCGGTCCCTGTCT
TCCTTGCTATCTCGACGTCGACGGGGTGTTTCCTCTAACCCAAAGTAGAA
GTTGCTTGGCTGGCATGCATTGGCACCGCCATCGGCAGCAAAGCGTGACC
TCGATTCGCAAGCGTGGAGACAAGAGAAGGAAGGAACCTCAAGCTTGCTC
GTGTGGCCGGCCGTGCCAAGTCGCGAGTTGGGCGCATCCTCAAGTACAAG
TAGGATGGAGATGTGTTACAAAACGCATCCCCACCAAATAATACCAACAT
AGATGTGTACGGAGTCGTCAACAACAGGTTCTGGTGTAAGGATTCCCTCA
CCTCGGCTCGAACACAAAAGCATGGGCCGGAACGATACCCCCGACTCGCA
CGCAACGCGCATTCCTTCCCACCCGTTTCTGCAGGCTCTCTTCGGTCGAC
CTGGGGGCGTCAGGATGGGAAACAACAACGGCGACGGCATGATCGGCGGC
GGAAATAACAACAACGACGACAACGGCCACGGATCGTTTGACGACGGCGA
GGAAGACGGCGGCATGGATGCGCTCGCCATGATGGGCGTGCTAGCTGCGA
TCAAGGATACCACGGGGGGTGCCTGGGACGCGTACAACGGCGCGTTGGCC
GACAAGCCGATCCTCGTGAAGGTGAGGAGAAGTTTGCTCGCGGATTATAC
CGAGTAATAGAGCGCGTTCCTCGGGCTGGACGTTTTAAGGACATCTACGA
AACAACATCCCACCCCCTACCTGGAAAACGAAGACCAGATGAGCATTTTG
TTCCACATGTCTTCGCCGATATTTCCATTTTCTGCCGTCGCTGCTGTATT
TAAGTCGCCCCGAACTACTCTACAGGCAGACAGGTGTCGTTCTGGCATTT
GCGGCAGTGTTGAAAATGTTCGGCAGAGCATTACCGCTTGCCGATACAAG
ATTGCGTGTCGAACAGCCATCCTCTCGTTTGCCTCGGTGCCCGTTCCAGG
TTGCATGCAGAGTATCTCTCCACAGTCTTGGAGACCTTTCAGGCAAGTAT
TTGTTTATTTATCACCAAAACCCCACTCACGCATGAGGTGGAATCGCCCT
TTAAGAAACCGTAGGGCGCAGCTGGGCTTGGAGATTATAAATTGTGTAGA
GCCCCGCCAACGCTTGACCCTCGGCTTATCAACGCTCGGTGTAACACACG
CCCTCGCATTAACGCCTTATCTAATGGAACATCGCATGCTTATGAATACC
CACCTTCCCCCCCCACCTGGCATCAATCTCACTGTCAAAACCAGGCTTGC
ACGTCCCTGGTGGGCTTCTCGATCGGTGACTTCCTTGCTCAGAAGGGCAC
CTCAAAGGACAAGTTCTCGTATGAGCGTCTGGCCCGCATGGCGGCGTTCG
GCTTCCTCTTCCACGGGACAATCTCCCACTTCTTCTACAACGCGCTCGAC
AGCGCCCTGCCGGGTACCGCGGCCTTCACCGTCATCCAGAAGGTACGGTT
TTAGTGCATCGTCATCCTCGTCCTCGTTGTCGACGTCGTCGGCATTTTCG
TACAAGCGGGGATCGCTTGCTTGCTTCACGAACGAGCTCTCTGTTTTCAG
TGAAAGCTTTTGATAGCCATGAAGGTCTTGATACAAATCTTTTAGTCTGT
CTCCGGCGTTAGCGGTCGTGTCGGAGTTTGGCGCATGGGCCTGTAACCGT
GGAGACGGCAGTAGGATTTCATGTGTCGGAGTTTCTGCCGCCCAGATATA
CGCAGGAAAATGGCAGAGCGAAAGTTGATCCGCTGGTTCAATGCTTTACC
TCTGTCTGACGTGTAGAAGGGTAAGGCTGTCCCTCTCTTCGAAGAAATAT
CAAGAGAGTCGATTTGATCTGTCAACTCCCAGCGGAATACCACGATTTGG
CAACCCAGCCCGAGCTTTCCTCTTGAATGTTGCCTGCCGCTCCTATGGGA
GTTATCTTCCATTGATCTGTGCAGAGTGCAGAATGGGTGTCGCTCCCCTG
CTCCAATGAATCTTCGTGACCCACTTCTTGCCGGAGATTGGGTTGTGCCG
CACGTACGCACACTCTCAATACCGTGAGGATATATTAGATGCTTTGTCCT
TGACGAGGGTTTTCTCTCAATTCCTGGGTTTGTGACATTCCACGCCGCGC
GATTCTTCGCTTGTTGCAGGTGGTGATCGACCAGGTCTTCTGGGCTCCCA
TCTTCACCCTCATCTTCTTCACCTGGATCGGAATCACGTCGGGCGCGAGC
CCGAGCGAGATCGTCGCTAAGGTGAAGAGCGACCTCGTGCAGGGGGTGGT
GGGCTCGTGGACGGTGTGGCCGCTCGCGCACACGATCAACTTCAAGTACG
TGCCGACGGAGCAGCGCCTGCTGTACATCAACTCCATCCAGATCTTCTAC
AACGTCTTCCTGTCGATCATCGGCTCCAAGTGAAGGGAACAAAACCCTCT
CAAGTATGAGATACGACCCGTTCTTCGCGTCGTCACGCTGAGCCAGGAAG
GGGGGGACGCCCTTCTCGAGCAAGATGCGATTCGCAGGGCAAGATTCGTA
GATGGCTACCATTTCGTCGCAACAGTTTTGAGGTGGGAGTACCACGACAA
GGCGGCGTTAGTCGTGGGGAGGTGGTCGCAGCCTAAACCAAGCGGCGGCA
GCAACAGCAGTAGCAATAGCAAGAGTGACGGCGGCCGGAGCAGGAGAGTA
GGGAGGAGTATGTCCTTGAGGTGCTACTGCTTCGCGCGGTCTCTGTTCGT
TGTTATTTTTAAGCTTCCGAAAGCCGGGGGCATGAGGTTCTTTTTTTTCG
TGGCTAGGATGATGAGGAGACGCGGGAAAGCCGACACGGCAGTTGTCGAT
GAAGAAACGCCTCCCACCATTTTCTGAGTTGGGATTGTAAGTTGCCGAAT
GGCCTGCCCTCTGGAGGGTGCGCGCGGGGATGCGTTGGGTTAATGTCGGT
TGGTCGTAACAGGCTTTCCCTGACTCGTGAAGATCCGGAACGGGCGGGGC
GCGGGTCGGGGGCTTAAGGTCCAAGCACCCGTGAAGGGCTTCGCTGCCGT
CTACTACGGCGGTGGCTGCTGTCTCTGGTCGTTTCTCGGGTGCTGGACAA
AGGGTTCAGGAATGTTGCTGAGAGTCACGGCAAGTCGACGCAAGGGACAA
GAGGGAAACGTCAGAGGTTTTTGGGGATCGAGACGAAGACTTGCGTTCGC
CTCGGCGACGAACCGACGTAAGCATTGCCACGTGGGTATATTCGGTGTTG
TGCAGGGAGATAGAGGGGGAGAGAAGTTCCGTATGCGAAGAAACGCAGGA
GGGTTTTGGCGTGCTTCGTGTGACGGCTGTAAATTGGCATGGGGATACGG
GATTCGGCCTGTTTGGTTGACGACCCGGGTCGGTACCTCTTCGCCGGGGG
GGGGGGGGCTGTGGTGAGGGTTTCGATTCCCCTTCGAAGCCTGCGTGATT
GACCACTTTACGCCGCCAATATTGGCATGGCGTACGACGCGCTTGTCACA
TGTCGCTTGTGTTTTTTTAGAAAAATCAAGCTTTCGTCGTGGCCGGCGGA
AAGGCGGCGTCTAAATGGCATGGAAAAGCACGAAAGGGCAGGGTGGAAAA
TGGTAGTGTCTTCCGTCTTGTTTGCCTTCATTGTCTCGTCAACCGGTTGT
GTGTGAGTGAGTTTGGTGCTTCTTTCTTTTCCTTGCCGTCTCGACGTTTC
CGGGCGATACAAGGTCCGACATTTCATCTTCGAATTAAATTAAATTAGCA
AGTATCCGTTATAAGAGAGGCGAAAGTACTCCGGCCATCAAGATCGTGTA
CGCCGAAGAAGCTCAGACGCCCATTCAATCGTTCCGATAACTTGCCTTCC
TCTTGGATGCCCTACGTCAATCTTGCTCCTGTGCGAGAATCCCTTCCGGG
CGTGTGTCTCTGGGCGAGACAAGAGCCGTGCACATGTGCCATCCCGTCCG
CAGGGAGCGAACCGCAGATTAGATCCTGCATCGAAACATGCGTATCGGTA
TGCCGTGAGGCCCTTGAGCCCCTCGGGAAAGAAAAGAGTTCGTGCCTCTA
TCTGTACAGAGTTGTGGACTGGAGTAACGGG
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig133:4781..9261-

>mRNA_H-canaliculatus_F_contig133.2694.1 ID=mRNA_H-canaliculatus_F_contig133.2694.1|Name=mRNA_H-canaliculatus_F_contig133.2694.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1764bp|location=Sequence derived from alignment at H-canaliculatus_F_contig133:4781..9261- (Hapterophycus canaliculatus Oshoro5f female)
ATGGTTCGGTCGTCCGCTATCCCCGCGGCCCTTGTGGTTCTTGCATCGTC
TTCATGCACGGCTTTTGTAGCCCCCCTTGTGACCCGCGTCTCCACCGCGC
CGACGACAACAAGCATGTCACTGAAGGCCCCTGGAGGACGCCCTTCTTCT
CCCATCAACAAGGCGGCTGGAGTTGTCAGCAAGATGGTTCGGTCGTCCGC
TATCCCCGCGGCCCTTGTGGTTCTTGCATCGTCTTCATGCACGGCTTTTG
TAGCCCCCCTTGTGACCCGCGTCTCCACCGCGCCGACGACAACAAGCATG
TCACTGAAGGCCCCTGGAGGACGCCCTTCTTCTCCCATCAACAAGGCGGC
TGGAGTTGTCAGCAAGGCTCTCTTCGGTCGACCTGGGGGCGTCAGGATGG
GAAACAACAACGGCGACGGCATGATCGGCGGCGGAAATAACAACAACGAC
GACAACGGCCACGGATCGTTTGACGACGGCGAGGAAGACGGCGGCATGGA
TGCGCTCGCCATGATGGGCGTGCTAGCTGCGATCAAGGATACCACGGGGG
GTGCCTGGGACGCGTACAACGGCGCGTTGGCCGACAAGCCGATCCTCGTG
AAGGCTCTCTTCGGTCGACCTGGGGGCGTCAGGATGGGAAACAACAACGG
CGACGGCATGATCGGCGGCGGAAATAACAACAACGACGACAACGGCCACG
GATCGTTTGACGACGGCGAGGAAGACGGCGGCATGGATGCGCTCGCCATG
ATGGGCGTGCTAGCTGCGATCAAGGATACCACGGGGGGTGCCTGGGACGC
GTACAACGGCGCGTTGGCCGACAAGCCGATCCTCGTGAAGGCTTGCACGT
CCCTGGTGGGCTTCTCGATCGGTGACTTCCTTGCTCAGAAGGGCACCTCA
AAGGACAAGTTCTCGTATGAGCGTCTGGCCCGCATGGCGGCGTTCGGCTT
CCTCTTCCACGGGACAATCTCCCACTTCTTCTACAACGCGCTCGACAGCG
CCCTGCCGGGTACCGCGGCCTTCACCGTCATCCAGAAGGCTTGCACGTCC
CTGGTGGGCTTCTCGATCGGTGACTTCCTTGCTCAGAAGGGCACCTCAAA
GGACAAGTTCTCGTATGAGCGTCTGGCCCGCATGGCGGCGTTCGGCTTCC
TCTTCCACGGGACAATCTCCCACTTCTTCTACAACGCGCTCGACAGCGCC
CTGCCGGGTACCGCGGCCTTCACCGTCATCCAGAAGGTGGTGATCGACCA
GGTCTTCTGGGCTCCCATCTTCACCCTCATCTTCTTCACCTGGATCGGAA
TCACGTCGGGCGCGAGCCCGAGCGAGATCGTCGCTAAGGTGAAGAGCGAC
CTCGTGCAGGGGGTGGTGGGCTCGTGGACGGTGTGGCCGCTCGCGCACAC
GATCAACTTCAAGTACGTGCCGACGGAGCAGCGCCTGCTGTACATCAACT
CCATCCAGATCTTCTACAACGTCTTCCTGTCGATCATCGGCTCCAAGTGA
GTGGTGATCGACCAGGTCTTCTGGGCTCCCATCTTCACCCTCATCTTCTT
CACCTGGATCGGAATCACGTCGGGCGCGAGCCCGAGCGAGATCGTCGCTA
AGGTGAAGAGCGACCTCGTGCAGGGGGTGGTGGGCTCGTGGACGGTGTGG
CCGCTCGCGCACACGATCAACTTCAAGTACGTGCCGACGGAGCAGCGCCT
GCTGTACATCAACTCCATCCAGATCTTCTACAACGTCTTCCTGTCGATCA
TCGGCTCCAAGTGA
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