mRNA_H-canaliculatus_F_contig10258.268.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig10258.268.1
Unique NamemRNA_H-canaliculatus_F_contig10258.268.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
[Close]
BLAST of mRNA_H-canaliculatus_F_contig10258.268.1 vs. uniprot
Match: D7FX19_ECTSI (Er lumen protein retaining receptor 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FX19_ECTSI)

HSP 1 Score: 335 bits (859), Expect = 6.600e-109
Identity = 164/182 (90.11%), Postives = 176/182 (96.70%), Query Frame = 3 
Query:    3 DFVYHVAEMASLALAAGCVVLMSTRFKSTYQKEADSFGALHVPTEWGTLYIFVPCLLLAVVVHPTLNKHFLSDTAWTFSMYLESMAIVPQLFMFQKQAKGIVEVLVTHSTFALGFARVLDMIFWIFSYKELTSHAGSNSVGMFVLFAQFVHIVIMGDFFYYYAISVKTGNMMQLPSQLSGMV 548
            DFVYH AE+ASLALA GCVVL+ST+FKSTYQ++ DSFGALHVPTEWGTLYIFVPCLLLA+V+HP LNK+FLSDTAWTFSMYLESMAIVPQLFMFQKQAKGIVEVLVTHSTFALG ARVLDM+FW+FSYKELT HAGSNSVGMFVLF+QFVH+VIMGDFFYYYAISVKTGNMMQLPSQLSGMV
Sbjct:  112 DFVYHGAEIASLALAVGCVVLISTKFKSTYQQDVDSFGALHVPTEWGTLYIFVPCLLLAIVMHPNLNKNFLSDTAWTFSMYLESMAIVPQLFMFQKQAKGIVEVLVTHSTFALGLARVLDMVFWMFSYKELT-HAGSNSVGMFVLFSQFVHVVIMGDFFYYYAISVKTGNMMQLPSQLSGMV 292
[Close]
BLAST of mRNA_H-canaliculatus_F_contig10258.268.1 vs. uniprot
Match: A0A836CR66_9STRA (Er lumen protein retaining receptor 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CR66_9STRA)

HSP 1 Score: 248 bits (633), Expect = 5.360e-75
Identity = 116/181 (64.09%), Postives = 146/181 (80.66%), Query Frame = 3 
Query:    3 DFVYHVAEMASLALAAGCVVLMSTRFKSTYQKEADSFGALHVPTEWGTLYIFVPCLLLAVVVHPTLNKHFLSDTAWTFSMYLESMAIVPQLFMFQKQA--KGIVEVLVTHSTFALGFARVLDMIFWIFSYKELTSHAGSNSVGMFVLFAQFVHIVIMGDFFYYYAISVKTGNMMQLPSQLS 539
            DF+YH AEM S+ALAA C+  M TRF+ +YQ++ D+FG++ +P+  GTLY+ VPC++LAV++HPTLN  F+SDT WT SMY+E+ AI+PQL+MFQ+ A  KG+VEVLV+HS FALGFARVLDMIFW++SY EL+  AGS SVGM VL  QF+HI IMGDFFYYY IS+KTG  MQLP   S
Sbjct:  113 DFIYHAAEMLSMALAAACLFYMHTRFERSYQRDYDTFGSVGLPSHLGTLYMIVPCVVLAVLLHPTLNNDFISDTTWTLSMYMETCAIIPQLYMFQRSAANKGVVEVLVSHSVFALGFARVLDMIFWLYSYHELSDAAGSKSVGMLVLATQFIHIAIMGDFFYYYLISIKTGKAMQLPISAS 293
[Close]
BLAST of mRNA_H-canaliculatus_F_contig10258.268.1 vs. uniprot
Match: A0A835ZJ22_9STRA (Er lumen protein retaining receptor 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJ22_9STRA)

HSP 1 Score: 238 bits (608), Expect = 2.790e-71
Identity = 113/181 (62.43%), Postives = 140/181 (77.35%), Query Frame = 3 
Query:    3 DFVYHVAEMASLALAAGCVVLMSTRFKSTYQKEADSFGALHVPTEWGTLYIFVPCLLLAVVVHPTLNKHFLSDTAWTFSMYLESMAIVPQLFMFQKQA--KGIVEVLVTHSTFALGFARVLDMIFWIFSYKELTSHAGSNSVGMFVLFAQFVHIVIMGDFFYYYAISVKTGNMMQLPSQLS 539
            DF+YH AE  SL  A  C+V M T F  +YQ++ D+FG +++P  +GTLY+ VPC+++AV+ HPTLN  F+SDT WT SMY+E+ AIVPQLFMFQ+ A  KG+VEVLV+HS FALGFARVLDM+FW++SY EL+  AGS SVGM VL  QF+HI IMGDFFYYY IS+KTG  MQLP   S
Sbjct:  113 DFIYHAAEGLSLVGALLCLVFMHTSFARSYQRDYDTFGNIYIPARFGTLYMIVPCVVMAVLFHPTLNNDFISDTTWTLSMYMETCAIVPQLFMFQRSAVNKGVVEVLVSHSVFALGFARVLDMVFWLYSYHELSDAAGSKSVGMLVLATQFIHIAIMGDFFYYYFISIKTGQAMQLPVSAS 293
[Close]
BLAST of mRNA_H-canaliculatus_F_contig10258.268.1 vs. uniprot
Match: A0A7S2SS64_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SS64_9STRA)

HSP 1 Score: 212 bits (539), Expect = 5.390e-61
Identity = 99/182 (54.40%), Postives = 130/182 (71.43%), Query Frame = 3 
Query:    3 DFVYHVAEMASLALAAGCVVLMSTRFKSTYQKEADSFGALHVPTEWGTLYIFVPCLLLAVVVHPTLNKHFLSDTAWTFSMYLESMAIVPQLFMFQKQAKGIVEVLVTHSTFALGFARVLDMIFWIFSYKELTSHAGSNSVGMFVLFAQFVHIVIMGDFFYYYAISVKTGNMMQLPSQLSGMV 548
            D+ YH+ E  SLAL  G + L+  RF++TY +  D+FG+LH+P ++G +YI VP ++LA+ + P LNK F SD AWTFSMYLES+AI+PQL+MF KQA   VEVLV+H  FALGFARV++M FW++S+ ELT HA    VG  VL +QF H+  MGDFFYYY  S++ G  M +    SGMV
Sbjct:  120 DWFYHLVETTSLALVCGAIFLLYFRFRATYDEAKDAFGSLHIPPQYGVVYIIVPAMILAIFLRPNLNKDFFSDAAWTFSMYLESVAILPQLYMFTKQANTPVEVLVSHCVFALGFARVMEMAFWLWSFHELTGHATGRLVGYVVLLSQFFHVAFMGDFFYYYFQSIRWGTPMNVLPTHSGMV 301
[Close]
BLAST of mRNA_H-canaliculatus_F_contig10258.268.1 vs. uniprot
Match: A0A7S2GHT0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GHT0_9STRA)

HSP 1 Score: 210 bits (535), Expect = 1.420e-60
Identity = 102/186 (54.84%), Postives = 136/186 (73.12%), Query Frame = 3 
Query:    3 DFVYHVAEMASLALAAGCVVLMSTRFKSTYQKEADSFGALHVPTEWGTLYIFVPCLLLAVVVHPTLNKHFLSDTAWTFSMYLESMAIVPQLFMFQKQAKG----IVEVLVTHSTFALGFARVLDMIFWIFSYKELTSHAGSNSVGMFVLFAQFVHIVIMGDFFYYYAISVKTGNMMQLPSQLSGMV 548
            D+ YHV E  SL  A   V  +  +++ TY    D+FG L +P+  G LYI +PCL+LAV+ HP LNK F+SD +WTFSMYLES+AI+PQL+MFQKQA G    ++EVLV+HS FALGFARV++  FW+ S+ EL S AGS  VG  VL +QF+H+ +MGDFFY+Y +S+++G  MQLP+Q SG+V
Sbjct:  104 DWFYHVVEFTSLVSACVAVYQLFYKYRGTYDDSKDAFGNLGIPSFLGVLYIVLPCLILAVIFHPNLNKDFISDASWTFSMYLESLAILPQLYMFQKQASGTGSGVIEVLVSHSVFALGFARVVESAFWMSSFHELHSGAGSQFVGWVVLLSQFIHVALMGDFFYFYFLSLQSGTAMQLPTQ-SGLV 288
[Close]
BLAST of mRNA_H-canaliculatus_F_contig10258.268.1 vs. uniprot
Match: A0A6V2QBA8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2QBA8_HETAK)

HSP 1 Score: 208 bits (530), Expect = 7.300e-60
Identity = 94/175 (53.71%), Postives = 126/175 (72.00%), Query Frame = 3 
Query:    3 DFVYHVAEMASLALAAGCVVLMSTRFKSTYQKEADSFGALHVPTEWGTLYIFVPCLLLAVVVHPTLNKHFLSDTAWTFSMYLESMAIVPQLFMFQKQAKGIVEVLVTHSTFALGFARVLDMIFWIFSYKELTSHAGSNSVGMFVLFAQFVHIVIMGDFFYYYAISVKTGNMMQLP 527
            D+ YH+ E  +L L      L+   F + Y+K  D FG LHVP E+G +Y+ VPC LLA+V HP+LN  + SD  WTFSMYLE++AI+PQL+MFQKQ   +VEVL++HS FALGFARVLD++FW+ +Y EL     +N  GM +LF QF+++ +MGDFFYYY +S+K+G  MQLP
Sbjct:  104 DWFYHMVEFLALVLVGLSGFLIMGPFAARYEKTFDCFGNLHVPPEYGAVYLIVPCFLLALVFHPSLNNEWFSDCCWTFSMYLETVAIMPQLYMFQKQVSRVVEVLISHSVFALGFARVLDLVFWLSTYSELAGKGSTNFSGMLILFTQFINVALMGDFFYYYFLSIKSGTGMQLP 278
[Close]
BLAST of mRNA_H-canaliculatus_F_contig10258.268.1 vs. uniprot
Match: A0A6U3TZA3_9STRA (Hypothetical protein n=4 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3TZA3_9STRA)

HSP 1 Score: 199 bits (506), Expect = 2.310e-55
Identity = 90/181 (49.72%), Postives = 125/181 (69.06%), Query Frame = 3 
Query:    3 DFVYHVAEMASLALAAGCVVLMSTRFKSTYQKEADSFGALHVPTEWGTLYIFVPCLLLAVVVHPTLNKHFLSDTAWTFSMYLESMAIVPQLFMFQKQAKGIVEVLVTHSTFALGFARVLDMIFWIFSYKELTSHAGSNSVGMFVLFAQFVHIVIMGDFFYYYAISVKTGNMMQLPSQLSGM 545
            D++YHV E+ +L   +  +      F+ TYQ +AD FG + VP   G LY+ VP L+L+ ++HP LN  F SD AWT++MYLES+A++PQL+MFQKQA G+VE+L  H   ALGF R+L+  FWI+SY EL++ AGSN  G   +F+QF+ +V+M DFFYYY +++K    M LPS  SGM
Sbjct:  183 DWLYHVIEVLALLFTSSALYGCMVPFRQTYQADADKFGEISVPAGCGALYLAVPVLVLSCIIHPNLNSDFFSDVAWTYAMYLESLALIPQLYMFQKQATGVVELLTAHFVAALGFGRILEFTFWIYSYHELSNSAGSNLPGYLAIFSQFIQLVLMLDFFYYYYVAIKNATPMVLPSHSSGM 363
[Close]
BLAST of mRNA_H-canaliculatus_F_contig10258.268.1 vs. uniprot
Match: A0A7S2H0H3_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2H0H3_9STRA)

HSP 1 Score: 198 bits (504), Expect = 4.520e-55
Identity = 95/181 (52.49%), Postives = 125/181 (69.06%), Query Frame = 3 
Query:    3 DFVYHVAEMASLALAAGCVVLMSTRFKSTYQKEADSFGALHVPTEWGTLYIFVPCLLLAVVVHPTLNKHFLSDTAWTFSMYLESMAIVPQLFMFQKQAKGIVEVLVTHSTFALGFARVLDMIFWIFSYKELTSHAGSNSVGMFVLFAQFVHIVIMGDFFYYYAISVKTGNMMQLPSQLSGM 545
            D++YHV E+ +L   +  +      FKSTYQ +AD FG ++VP+  G +Y+ VP LL+A+ +HP LN  FLSD AWT++MYLES+A+VPQL+MFQKQA G+VE+L  H   ALGF RVL+  FWI+SY EL S  GS   G   + +QFV +V+M DFFYYY ++VK    M LPS  SGM
Sbjct:  183 DWLYHVIEIMALIFTSSALYGCMFPFKSTYQADADKFGEINVPSGLGAVYLAVPVLLVALFIHPNLNSDFLSDVAWTYAMYLESVALVPQLYMFQKQATGVVELLTAHFVAALGFGRVLEFAFWIYSYHELASSNGSKLPGYLAILSQFVQLVLMLDFFYYYYVAVKNATPMVLPSHTSGM 363
[Close]
BLAST of mRNA_H-canaliculatus_F_contig10258.268.1 vs. uniprot
Match: B8C3M7_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C3M7_THAPS)

HSP 1 Score: 191 bits (486), Expect = 1.710e-53
Identity = 91/181 (50.28%), Postives = 123/181 (67.96%), Query Frame = 3 
Query:    3 DFVYHVAEMASLALAAGCVVLMSTRFKSTYQKEADSFGALHVPTEWGTLYIFVPCLLLAVVVHPTLNKHFLSDTAWTFSMYLESMAIVPQLFMFQKQAKGIVEVLVTHSTFALGFARVLDMIFWIFSYKELTSHAGSNSVGMFVLFAQFVHIVIMGDFFYYYAISVKTGNMMQLPSQLSGM 545
            D++YHV E+ +L   A  +      FK TYQ + D FG ++VP   G +Y+ VP +LLAV VHP LN  F+SD AWT++MYLES+A+VPQLFMFQKQ  G+VE+L  H   ALGF RV++ +FW++SY EL + AGS   G   LF+QF+ +V+M DFF+YY ++VK    + LPS  S M
Sbjct:   96 DWLYHVIEILALVFTASALWGCMVPFKQTYQADQDKFGEMNVPPGAGAVYLAVPVMLLAVFVHPNLNSDFVSDVAWTYAMYLESVALVPQLFMFQKQQSGVVELLTAHFVAALGFGRVMEFMFWVYSYHELATSAGSKLPGYLALFSQFMQLVLMLDFFWYYYLAVKNATPLVLPSHGSAM 276
[Close]
BLAST of mRNA_H-canaliculatus_F_contig10258.268.1 vs. uniprot
Match: A0A7S2UQ71_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UQ71_9STRA)

HSP 1 Score: 192 bits (488), Expect = 8.230e-53
Identity = 91/181 (50.28%), Postives = 125/181 (69.06%), Query Frame = 3 
Query:    3 DFVYHVAEMASLALAAGCVVLMSTRFKSTYQKEADSFGALHVPTEWGTLYIFVPCLLLAVVVHPTLNKHFLSDTAWTFSMYLESMAIVPQLFMFQKQAKGIVEVLVTHSTFALGFARVLDMIFWIFSYKELTSHAGSNSVGMFVLFAQFVHIVIMGDFFYYYAISVKTGNMMQLPSQLSGM 545
            D+VYH+ E+ +L   A  +      FK TYQ + D FG L+VP  +G +YI  P L++A+ +HP+LN  FLSD AWT++MYLES+A++PQL+MFQKQ  G+VE+L  H   ALGF R+L+ +FWI+SY EL S AGS   G   LF+QF+ +V+M DFF+YY ++VK    + LPS  SGM
Sbjct:  178 DWVYHIIELMALVFTAAALWACMGPFKQTYQSDFDKFGELNVPPGYGAVYIAGPVLVIALFIHPSLNNDFLSDVAWTYAMYLESVALIPQLYMFQKQTSGVVELLTAHFVAALGFGRLLEFLFWIYSYHELASSAGSKLPGYLALFSQFMQLVLMLDFFWYYYLAVKNATPLVLPSH-SGM 357
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10258.268.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FX19_ECTSI6.600e-10990.11Er lumen protein retaining receptor 1 n=2 Tax=Ecto... [more]
A0A836CR66_9STRA5.360e-7564.09Er lumen protein retaining receptor 1 n=1 Tax=Trib... [more]
A0A835ZJ22_9STRA2.790e-7162.43Er lumen protein retaining receptor 1 n=1 Tax=Trib... [more]
A0A7S2SS64_9STRA5.390e-6154.40Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2GHT0_9STRA1.420e-6054.84Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A6V2QBA8_HETAK7.300e-6053.71Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A6U3TZA3_9STRA2.310e-5549.72Hypothetical protein n=4 Tax=Ditylum brightwellii ... [more]
A0A7S2H0H3_9STRA4.520e-5552.49Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
B8C3M7_THAPS1.710e-5350.28Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A7S2UQ71_9STRA8.230e-5350.28Hypothetical protein n=1 Tax=Attheya septentrional... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig10258contigH-canaliculatus_F_contig10258:122..4936 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score316.2
Seed ortholog evalue9.4e-84
Seed eggNOG ortholog2880.D7FX19
KEGG koko:K10949
KEGG Pathwayko05110,map05110
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0012505,GO:0016020,GO:0031984,GO:0042175,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0098827
EggNOG free text desc.ER retention sequence binding
EggNOG OGsCOG5196@1,KOG3106@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04131
Hectar predicted targeting categorysignal peptide
Exons4
Model size1582
Cds size525
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig10258.268.1prot_H-canaliculatus_F_contig10258.268.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig10258 1153..4910 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928655.54577-UTR-H-canaliculatus_F_contig10258:121..11521622928655.54577-UTR-H-canaliculatus_F_contig10258:121..1152Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig10258 122..1152 -
1696845515.6907415-UTR-H-canaliculatus_F_contig10258:121..11521696845515.6907415-UTR-H-canaliculatus_F_contig10258:121..1152Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig10258 122..1152 -
1622928658.4283314-UTR-H-canaliculatus_F_contig10258:4910..49361622928658.4283314-UTR-H-canaliculatus_F_contig10258:4910..4936Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig10258 4911..4936 -
1696845515.7419345-UTR-H-canaliculatus_F_contig10258:4910..49361696845515.7419345-UTR-H-canaliculatus_F_contig10258:4910..4936Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig10258 4911..4936 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928655.558104-CDS-H-canaliculatus_F_contig10258:1152..12071622928655.558104-CDS-H-canaliculatus_F_contig10258:1152..1207Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10258 1153..1207 -
1696845515.7029371-CDS-H-canaliculatus_F_contig10258:1152..12071696845515.7029371-CDS-H-canaliculatus_F_contig10258:1152..1207Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10258 1153..1207 -
1622928658.245541-CDS-H-canaliculatus_F_contig10258:1764..19431622928658.245541-CDS-H-canaliculatus_F_contig10258:1764..1943Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10258 1765..1943 -
1696845515.713352-CDS-H-canaliculatus_F_contig10258:1764..19431696845515.713352-CDS-H-canaliculatus_F_contig10258:1764..1943Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10258 1765..1943 -
1622928658.3907585-CDS-H-canaliculatus_F_contig10258:3733..38681622928658.3907585-CDS-H-canaliculatus_F_contig10258:3733..3868Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10258 3734..3868 -
1696845515.7228398-CDS-H-canaliculatus_F_contig10258:3733..38681696845515.7228398-CDS-H-canaliculatus_F_contig10258:3733..3868Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10258 3734..3868 -
1622928658.411565-CDS-H-canaliculatus_F_contig10258:4754..49101622928658.411565-CDS-H-canaliculatus_F_contig10258:4754..4910Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10258 4755..4910 -
1696845515.732098-CDS-H-canaliculatus_F_contig10258:4754..49101696845515.732098-CDS-H-canaliculatus_F_contig10258:4754..4910Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10258 4755..4910 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig10258.268.1

>prot_H-canaliculatus_F_contig10258.268.1 ID=prot_H-canaliculatus_F_contig10258.268.1|Name=mRNA_H-canaliculatus_F_contig10258.268.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=175bp
MASLALAAGCVVLMSTRFKSTYQKEADSFGALHVPTEWGTLYIFVPCLLL
AVVVHPTLNKHFLSDTAWTFSMYLESMAIVPQLFMFQKQAKGIVEVLVTH
STFALGFARVLDMIFWIFSYKELTSHAGSNSVGMFVLFAQFVHIVIMGDF
FYYYAISVKTGNMMQLPSQLSGMV*
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mRNA from alignment at H-canaliculatus_F_contig10258:122..4936-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig10258.268.1 ID=mRNA_H-canaliculatus_F_contig10258.268.1|Name=mRNA_H-canaliculatus_F_contig10258.268.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=4815bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10258:122..4936- (Hapterophycus canaliculatus Oshoro5f female)
GCGACTTCGTCTACCACGTGGCGGAGATGGCCTCTCTCGCCTTGGCCGCC
GGCTGCGTGGTGCTCATGTCGACCCGGTTCAAGTCGACGTACCAGAAGGA
GGCGGACTCGTTCGGCGCGCTCCACGTGCCGACGGAGTGGGGCACGCTGT
ACATCTTCGTCCCCTGCCTCTTGCTCGCCGTGGTGAGTTGGCTCAGACGA
GCGCCCGGGGCGCTGAGCTGGAGCTCGGTTACTATGGTATTGTAGGCTTT
GGTGCGCTGGCCTGGGCTGGGACGGGGCTGGGCGAGGTTGAACTTGAGTC
GGCCGCGGGTCTTCCACCACGTATTTTTACCTTGAGCTGGGTCAACGTGG
ACTTTGGTGCGGTGGGCTGGGCTAGGCTGGGCTGGGCTTCGCAACGTCGA
ACCTGAGTCGGACGCAAATCTCCCTCCCATGTGTTTTTTTTTCGTGGTGT
GCGTTGACGGTCTTCGCACAATCGAGGGCACCGCGCCGTTCCGGCGGTGA
GGAGAGCGTCAAAACTGCGCTCGATCTGTCTCGTGACACCGTAGTCGAAG
CGCCGGTACTACCACAGACTGCTTGCTGTCCCAGCTGATGGGCAGCCACA
TTTTATCGCGCGGCTGCGCGTTCGGTCGGCACAGCCGGCCCGGCCTACCC
GTACCCTCGGGGTCGGCCTTAGAGGGCACCCGCGTAGCCGAAGAACGATC
TCACATCGTCGCGGCCAACGCCGCTTCCTTGGCCGCGGGATGTCGCTTGC
TGCCCGAGGGGTGGCGGGGAAGGGGGGAGGGCGAGGGGAGCGTCGAGCTA
GCTGTCCGAGTCACTGGATGCCGTTGACCGCGATCGCCGACTCGTGATCG
TTTTGCGGATTGCATGTCCTGTTCCCCCACTCTCGGATCCACGTGTTTTC
GCTAGCGGGTAGGCCCAGCCGGCTTTCAACGATTCCTTGCGATACCTCTT
GTTTATTTCACACTAGGGAGCGATCATCGACAGGTGGCTCGTGGGGTATT
TTTTTGTGTCTTTGGTGTCTTGTCGACGGTTTGCTGTCCGGCTCGCCAAC
CCAACCGATGCGGTGCAGGTGGTGCACCCCACGCTGAACAAGCACTTCCT
GTCGGACACGGCGTGGACCTTCTCGATGTACTTGGAGAGCATGGCGATCG
TTCCGCAACTCTTCATGTTCCAGAAGCAGGCTAAGGGGATTGTCGAGGTC
CTGGTGAGTTCGGGCCCCCTTCGGTGCTTTGCACCACCACCTTCGATCGC
AGCTTGTGCGTGTTGATGTCCGACAAAACTGTCTTGGAGGGAACAGAAAA
CTGCTATGAAGTCAGGGAACGCTGAAAAACACTCGGAAAGCATGTAAAGA
AATCTGTTGTGTTGGTGTGTACAAGCATGCGATGGCTCGCATCCAGCCGG
TTCGCATCGTCCTCTTTTTCTTTTCCTTTTCTGTCTTCCAGACTCCTCCT
CTCCTCCCTTCGCCGCAGAAGTGGCCCACCCGATGTTGCGCAGAGTATAA
GTCGGGCAAGAGGCACAGCATTCCTGCTGGAGTTAGCGCGCAAGATTCGA
ATTCCACGGTCTCGATCTTGATTTGTCGCTGGTTAGTCAGCTTCGTCGCC
GTTCAGCGAGCTGTATGTCATAACTTTTCTGCCCTTCTGCTTCGGTGCCC
TGGTCTAGGCTCGGCTAGTGAGCGTTGCTCCAGGGCATCTCTGTCAGGAG
CCGCACGATTTTGGGTGCTACGTGCGGTGCTGTAGCGCGCGAGAGCCGTT
GCAGGGGTCCCGTGCATGATTACTGCAATGCACTGAGGAGACGAGGGAGG
GGTGCTTGATTCCCGCGATCGGGCTTCATCGAAGCCGTTTGTCGGATTTT
CCCCCGCTTGCGCACGTCATGACGCATGTCATGACACACGATCATTGTTT
CGTTGCTTGCACAAGACTATTCGTTGCCCCCCTTGTTTACGGCACATGTA
GATGATGACGAGGAGCTGTTCAACTGCTTTTGGCGACTAGATGTACCGCC
GTTACACGAGGGGTTGCTTCTCGTCCGTCTATTTCCGCTCGGCGTTTATT
GTTGTCGTGTTGATATTGTGTGAAACGGCGTCCTCGCATCGCGAAAGCGA
ATGTTTTCTTGAGCCCTTTCAGTGAGGAAGAAATGCATCAGGGTTTTGTT
GGGGGGACGCAGAAGTCATTCATATTTGAGGAGTCTCTACCCATAGGTAA
ACGCGATGCAAGGGCCGTGCTTCCGTGTCACATGATGCTCGCTCCATCGC
GTAACCTTGACGCGTCGACCTAACGGCTGGTGCAATGACGCAAGACGACG
AGCGGACAACACTCTCACTTCTGCCCCGCGATACCTTTGCTTCCAAAGAC
TTACGTTGAAGTTTCTGAGCAGAAGTGAGAGTGCTATCCGCTCGTCGTCT
TGAGTCGTTGCACCAGCCGTTAGGTCGACGCGCCAAGGTAACGCGATGGA
GTGAGCATCATGTGATACGGAAGCACGGCTCGTGCATCGCGTTTACCTAT
GGGTAGAGACTCCTCAAATATGAATGACTTCTGCGTCCCCCCCCCCCCCC
CCCCCCCACCCCCCCACCCCTCTCCCCCCCCCCACCCCACACCCCCCAAC
CCCCCGCCCATGACCTCCCTCCTTCCCCCACCCCACCCTTTTCCGACTCC
AAAAATGGAATCCTGTCGCTCCCCCCCCCCCCCCACAAAATCCTGATTTA
TTTCTTCCCCCCTGCGATAACATAAGAAAATACTCGCTTTCGCGAGGAGA
GGTCGCCCGTGGCGTGCCTCGTCGGGAGTCCCATCGCGCCCAACCCCCCT
CTCCTTTCATCAGTTTTCATTCACGGTGTCGATCATTTCTTACCCACATG
GGACAAAAATGGCATTCAACCGGTGCTCTTTGTGCCTACTCCGCCGATCG
ACCTTCTTGGCTTCTCTTTTTCCTTCTTACGGCGGTTCGTTTGGGTGGGA
TTTGGCGTCGTTTGGTGTGGCCGGCGGGGGTCTCGGGGAGCAGGTTACAC
ACTCCACTTTCGCCCTGGGATTCGCGAGAGTGCTGGACATGATTTTCTGG
ATATTCAGCTACAAGGAGCTGACGAGCCACGCCGGCTCCAACTCGGTGGG
TATGTTCGTGCTGTTCGCTCAGTTCGTGCACATCGTCATCATGGGGGACT
TTTTCTACTACTACGCCATCAGGTCAGCACCGGGCAGGGGGGTGTGTCAT
GACTATGCATCGTTCTTGCTTTCGTCGGCGTGGAGGGGCGTGGGTTAACT
TAGCTTTGAAGAAATCTCTGGCGTGGGGGAGATTTGCGCCCGTGACGTGG
ATGGCTAGTGTTGGTGTTGTTGGCATTGGGTTTCGAAAGCACCTTGTTCG
CCAATTTGAGCACACCATTTGCTCGATGCCACGAGAAACCGCCACCCTTT
GATGTCGCGAGAGAAGGAAGGCTCTTGGGGTTTGCATCGTATATTTGCAT
TATTGCCGTGACTCCTGAAAGCAGGGTATTCATCTTCTTGCCCTTGCTTC
GGGGGATTCTGGAGTGTAGACGAAGCTGGGGCGTGATTTCGGCACTTTCG
AGTCGCGTACCTAGCTTCGCCTCGTGGGCTGCCGCGCCTCACGTGGCACT
CCCTTTTCGTGTGTCACATGAAGTGTCGCTGAACACTCTCTGTCTTCTTC
CCCCTCCGCCGGCCGCCCCCTTGCACCTCGGCACCATCGGCTTGTGCTCT
TCTTTCTGTGCACCCCCCCGGCACAACAGCGTCAAGACGGGGAACATGAT
GCAGCTACCATCGCAGCTGTCGGGTATGGTCTGATTGCTCTAATGTCGTT
GGAAGGACGCATGTGTTCGCTCCCCCCCTCCACCCCCGCCCACCCCTTCC
TGTCGAAATAGCACCGCCGTTAAGGCTAACGCATACCACTGGCGTGGCGT
TTGGTGACACGTAGTGGGTCAAAAACAAGGGGCCGGCGGAGGGGGCGAAA
CGAGACCTGGGGTATTTTTGAGGCAAAGAAGACACACTTGTCGGTATCTA
GATGGTGATATCGGTTTAGGTAAGGGCTCGAATACATGAGGCCGCTTTGT
TTTGTGGAGTAGAATCTACCTCTGTGTTCCTCTCTCGCTCGCGCTGACCA
GAAAGGCGTTTTTCAAACCATCCGATCGGACTGATCAAGCGTCAAGCGAC
ACCGGAAGTGCTGCCGGGCGCCGAGCGAATGGCCGTGATTCTGCGTTGTG
GTGCTTGCCGGGAAAAGTGGGGTAAGACTCTCGTGTGAAAGAGGGGACGA
TCGGTGGAAAGAGAGCCCATCCCCAATGATGGATCGACCCCCTGTTGGTT
GGACGTTACCTGTAAAGACTGCTGCCTTCCCGGGGTGTGGTGAACGGCAA
CGTGGTCCCTCGCCGACGGCCGTCATAGCGGAGCACACCCCCCGAGACGC
AGTTTTCGTGTGTTTTTTTGACGGGTTTTTGTTGCGTTCGTAGAAGTCGC
GAAAACCGGGTGACCGCACCACAAGGAGCGATCCTTCTGGCGGGAGGGGG
CGAGAGGCAGGCACACACTGGCGGTGCTGAGGTCCTCGCTGTTTTTTCTC
GGCTCGGACATGGATCGCCGCCGCTGTTGGGTTCGTTCGGGCAGCGTCCG
GGTGAGCGGGTGTGGAAGCTCGCGAAACCGATGATGACGACTCCGTTCGA
GGAAACCCTTCACCGCTCGCGACGAAAGCTTTGGCGCCCCGAACAACACC
GCGCCGCTCCCCGTGACGAAACAGACTTGAACGGCTTCGTGCGACGTACA
ACCCCGGCGAGTCGTCAGCGTTGTTTATCTTTCGTTTCATGTTTCAAGGC
GCCTTCGTAAACGCT
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig10258:122..4936-

>mRNA_H-canaliculatus_F_contig10258.268.1 ID=mRNA_H-canaliculatus_F_contig10258.268.1|Name=mRNA_H-canaliculatus_F_contig10258.268.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1050bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10258:122..4936- (Hapterophycus canaliculatus Oshoro5f female)
ATGGCCTCTCTCGCCTTGGCCGCCGGCTGCGTGGTGCTCATGTCGACCCG
GTTCAAGTCGACGTACCAGAAGGAGGCGGACTCGTTCGGCGCGCTCCACG
TGCCGACGGAGTGGGGCACGCTGTACATCTTCGTCCCCTGCCTCTTGCTC
GCCGTGATGGCCTCTCTCGCCTTGGCCGCCGGCTGCGTGGTGCTCATGTC
GACCCGGTTCAAGTCGACGTACCAGAAGGAGGCGGACTCGTTCGGCGCGC
TCCACGTGCCGACGGAGTGGGGCACGCTGTACATCTTCGTCCCCTGCCTC
TTGCTCGCCGTGGTGGTGCACCCCACGCTGAACAAGCACTTCCTGTCGGA
CACGGCGTGGACCTTCTCGATGTACTTGGAGAGCATGGCGATCGTTCCGC
AACTCTTCATGTTCCAGAAGCAGGCTAAGGGGATTGTCGAGGTCCTGGTG
GTGCACCCCACGCTGAACAAGCACTTCCTGTCGGACACGGCGTGGACCTT
CTCGATGTACTTGGAGAGCATGGCGATCGTTCCGCAACTCTTCATGTTCC
AGAAGCAGGCTAAGGGGATTGTCGAGGTCCTGGTTACACACTCCACTTTC
GCCCTGGGATTCGCGAGAGTGCTGGACATGATTTTCTGGATATTCAGCTA
CAAGGAGCTGACGAGCCACGCCGGCTCCAACTCGGTGGGTATGTTCGTGC
TGTTCGCTCAGTTCGTGCACATCGTCATCATGGGGGACTTTTTCTACTAC
TACGCCATCAGGTTACACACTCCACTTTCGCCCTGGGATTCGCGAGAGTG
CTGGACATGATTTTCTGGATATTCAGCTACAAGGAGCTGACGAGCCACGC
CGGCTCCAACTCGGTGGGTATGTTCGTGCTGTTCGCTCAGTTCGTGCACA
TCGTCATCATGGGGGACTTTTTCTACTACTACGCCATCAGCGTCAAGACG
GGGAACATGATGCAGCTACCATCGCAGCTGTCGGGTATGGTCTGACGTCA
AGACGGGGAACATGATGCAGCTACCATCGCAGCTGTCGGGTATGGTCTGA
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