prot_H-canaliculatus_F_contig1326.2668.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1326.2668.1
Unique Nameprot_H-canaliculatus_F_contig1326.2668.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length118
Homology
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BLAST of mRNA_H-canaliculatus_F_contig1326.2668.1 vs. uniprot
Match: A0A6H5L5F6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5F6_9PHAE)

HSP 1 Score: 177 bits (448), Expect = 2.820e-55
Identity = 94/117 (80.34%), Postives = 103/117 (88.03%), Query Frame = 0 
Query:    4 RSGAASRSPARVAEASG---SVQSAVRQRSLVEEDPDSERIPARTVCAAFSLLVLGLILLCMSAAFFARGHPGSLAFLILGIVVIIPGAHSSFQLFAAFRRWPGYDFDDMRGNGDFV 117
            RS   +RSPARVA+A     ++QS  RQRSLVE+ PDSERIPARTVCAAFSLLVLGLILLC+SA FFA  HPGS+AFL+LGIVVIIPGAHSSFQLFAAFRRWPGYDFDDMRG+GDFV
Sbjct:    6 RSPEITRSPARVADAGAGERNLQSIGRQRSLVEDHPDSERIPARTVCAAFSLLVLGLILLCVSANFFAMKHPGSVAFLVLGIVVIIPGAHSSFQLFAAFRRWPGYDFDDMRGSGDFV 122
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BLAST of mRNA_H-canaliculatus_F_contig1326.2668.1 vs. uniprot
Match: D7G3N7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3N7_ECTSI)

HSP 1 Score: 67.4 bits (163), Expect = 1.860e-11
Identity = 41/58 (70.69%), Postives = 46/58 (79.31%), Query Frame = 0 
Query:    4 RSGAASRSPARVAEASG---SVQSAVRQRSLVEEDPDSERIPARTVCAAFSLLVLGLI 58
            RS   SRSPARVA A     ++QS  RQRSLVE+ PD+ERIPARTVCAAFSLLVLGL+
Sbjct:    6 RSPEISRSPARVAGAGAGGRNLQSIGRQRSLVEDHPDNERIPARTVCAAFSLLVLGLL 63
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BLAST of mRNA_H-canaliculatus_F_contig1326.2668.1 vs. uniprot
Match: A0A8D8VI43_9HEMI (Transmembrane protein 230 n=1 Tax=Cacopsylla melanoneura TaxID=428564 RepID=A0A8D8VI43_9HEMI)

HSP 1 Score: 50.4 bits (119), Expect = 1.980e-5
Identity = 30/83 (36.14%), Postives = 46/83 (55.42%), Query Frame = 0 
Query:   34 EDPDSERIPARTVCAAFSLLVLGLILLCMSAAFFARGHPGS------LAFLILGIVVIIPGAHSSFQLFAAFRRWPGYDFDDM 110
            +D  SE+IP + +  A  L + G+I L  +  F   GH G+       +FLILG+++ IPGA+  F   AA++   GY F D+
Sbjct:   45 QDTPSEKIPWKAIALATFLAIGGVIQL-TAGVFIFTGHIGTEYEDRFYSFLILGMIMFIPGAYYLFIALAAYKNLSGYSFSDI 126
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BLAST of mRNA_H-canaliculatus_F_contig1326.2668.1 vs. uniprot
Match: A0A1S3DJ97_DIACI (Transmembrane protein 230 n=1 Tax=Diaphorina citri TaxID=121845 RepID=A0A1S3DJ97_DIACI)

HSP 1 Score: 49.7 bits (117), Expect = 3.880e-5
Identity = 27/83 (32.53%), Postives = 43/83 (51.81%), Query Frame = 0 
Query:   34 EDPDSERIPARTVCAAFSLLVLGLILLCMSAAFFARGHPGS------LAFLILGIVVIIPGAHSSFQLFAAFRRWPGYDFDDM 110
            +D   E++P + +  A  L + G++ L      F  GH G         FLILG+++ +PGA+  F  FAA++  PGY F  +
Sbjct:   45 QDSKHEKVPWKAIALAVFLAIGGMVQLTAGVLIFT-GHIGKEYEDRFWPFLILGVIMFLPGAYHLFVAFAAYKNIPGYSFSSI 126
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1326.2668.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5L5F6_9PHAE2.820e-5580.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G3N7_ECTSI1.860e-1170.69Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A8D8VI43_9HEMI1.980e-536.14Transmembrane protein 230 n=1 Tax=Cacopsylla melan... [more]
A0A1S3DJ97_DIACI3.880e-532.53Transmembrane protein 230 n=1 Tax=Diaphorina citri... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008590Protein of unknown function DUF872, transmembranePFAMPF05915DUF872coord: 20..109
e-value: 4.1E-12
score: 46.3
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..45
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 46..68
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 94..117
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 69..73
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 74..93
NoneNo IPR availableTMHMMTMhelixcoord: 77..99
NoneNo IPR availableTMHMMTMhelixcoord: 45..67

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1326contigH-canaliculatus_F_contig1326:4053..6545 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1326.2668.1mRNA_H-canaliculatus_F_contig1326.2668.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1326 3123..6593 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1326.2668.1 ID=prot_H-canaliculatus_F_contig1326.2668.1|Name=mRNA_H-canaliculatus_F_contig1326.2668.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=118bp
MSGRSGAASRSPARVAEASGSVQSAVRQRSLVEEDPDSERIPARTVCAAF
SLLVLGLILLCMSAAFFARGHPGSLAFLILGIVVIIPGAHSSFQLFAAFR
RWPGYDFDDMRGNGDFV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008590DUF872_TM