mRNA_H-canaliculatus_F_contig1322.2650.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig1322.2650.1
Unique NamemRNA_H-canaliculatus_F_contig1322.2650.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
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BLAST of mRNA_H-canaliculatus_F_contig1322.2650.1 vs. uniprot
Match: A0A1Y1Y9F9_9FUNG (Uncharacterized protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1Y9F9_9FUNG)

HSP 1 Score: 216 bits (550), Expect = 2.850e-63
Identity = 110/209 (52.63%), Postives = 143/209 (68.42%), Query Frame = 1 
Query:    1 SGSEAVEAAIKIARHTTGKQNVIVFRGAHHGRTTGTMGLTTSKISYRAGFGPFPPGAVITSYCYG--------------RLDEHAPFFLPLFNLVLATFPRSCCCQETSADETAAVLIELVQGEGGYVVPPQGFVRSVRDFCNKHGILMIADEIQSGAGRTGEWWAVNHSDLVPDILVFAEGIGSGMPISGVASRSELTASQPPGSMDG 585
            SG+EAVEAAIK+ARH TGK N+IV +G++HGRT GTM LTTSK  Y AGFGP  PG  +T + Y               R D    + +    L+L         Q+T+  +TAA+++E V GEGGYVVPP+ +V+ VR+ C+KHGIL+IADE+QSG GRTG+++A+ H+D+VPDI+V A+GI SG PISG+ SR EL   QPPGSM G
Sbjct:  110 SGAEAVEAAIKLARHATGKHNIIVMQGSYHGRTVGTMSLTTSKTIYSAGFGPLMPGVYVTPFPYTLHSPTQKAVPQDTLRHDLCIEYAIEQLELLLK--------QQTAPSDTAALIMESVLGEGGYVVPPKEYVQRVREICDKHGILLIADEVQSGFGRTGKYFAIQHADVVPDIMVMAKGIASGFPISGIVSRKELMDKQPPGSMGG 310
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BLAST of mRNA_H-canaliculatus_F_contig1322.2650.1 vs. uniprot
Match: K3WGZ0_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WGZ0_GLOUD)

HSP 1 Score: 208 bits (530), Expect = 1.390e-60
Identity = 108/202 (53.47%), Postives = 142/202 (70.30%), Query Frame = 1 
Query:    1 SGSEAVEAAIKIARHTTGKQNVIVFRGAHHGRTTGTMGLTTSKISYRAGFGPFPPGAVITSYCY---GRL---DEHAPFFLPLFNLVLATFPRSCCCQETSADETAAVLIELVQGEGGYVVPPQGFVRSVRDFCNKHGILMIADEIQSGAGRTGEWWAVN-HSDLVPDILVFAEGIGSGMPISGVASRSELTASQPPGSMDG 585
            SGSEAVE A+K+ARH+TGKQNVIVF+G +HGRT G M LTTSK  Y AGFGP   G  +  + Y   G +   +E + + L    L L         Q+++  +TAA+LIE + GEGGYVVPP+ F++ +R+ C ++ IL+IADE+QSG GRTGE++A+N H D+ PDILV A+GI +G P+SG+ASR ELT  QPPGSM G
Sbjct:  100 SGSEAVENAVKLARHSTGKQNVIVFQGGYHGRTIGAMSLTTSKTVYSAGFGPLMSGVKVVPFPYVQHGPIKDEEELSEWCLEQLRLALK--------QQSAPSDTAAILIEPIMGEGGYVVPPKSFMKGLREICTENNILLIADEVQSGFGRTGEYFAINGHFDVTPDILVIAKGIANGFPLSGIASRKELTDKQPPGSMGG 293
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1322.2650.1 vs. uniprot
Match: A0A836CIQ1_9STRA (4-aminobutyrate aminotransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIQ1_9STRA)

HSP 1 Score: 208 bits (529), Expect = 5.420e-60
Identity = 109/201 (54.23%), Postives = 138/201 (68.66%), Query Frame = 1 
Query:    1 SGSEAVEAAIKIARHTTGKQNVIVFRGAHHGRTTGTMGLTTSKISYRAGFGPFPPGAVITSYCYG---RLDEHAPF---FLPLFNLVLATFPRSCCCQETSADETAAVLIELVQGEGGYVVPPQGFVRSVRDFCNKHGILMIADEIQSGAGRTGEWWAVNHSDLVPDILVFAEGIGSGMPISGVASRSELTASQPPGSMDG 585
            SG+EAVEAA+K+ARH T + NVIVFRG +HGRT GTM +TTSK  YRAGFGP  P   +  + Y    RL + +       PL +L L         QE    E AA++IE VQGEGGYV  P  ++R +R  C+KHGIL++ADE+QSG  RTG  WAV H+ +VPD+LVFA+GI SGMP+SG A+R+EL+A+QP GSM G
Sbjct:  135 SGAEAVEAAVKLARHATQRPNVIVFRGGYHGRTMGTMAMTTSKYIYRAGFGPLMPSVNVAPFPYCAHCRLPKESGAECCLAPLEDLELMLK------QECHPSEVAAMVIEPVQGEGGYVPAPASYLRGLRALCDKHGILLVADEVQSGVARTGRMWAVEHAGIVPDVLVFAKGIASGMPLSGFATRAELSATQPAGSMGG 329
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BLAST of mRNA_H-canaliculatus_F_contig1322.2650.1 vs. uniprot
Match: A0A0S7BPQ3_9CHLR (4-aminobutyrate aminotransferase n=1 Tax=Longilinea arvoryzae TaxID=360412 RepID=A0A0S7BPQ3_9CHLR)

HSP 1 Score: 207 bits (526), Expect = 6.810e-60
Identity = 111/200 (55.50%), Postives = 136/200 (68.00%), Query Frame = 1 
Query:    1 SGSEAVEAAIKIARHTTGKQNVIVFRGAHHGRTTGTMGLTTSKISYRAGFGPFPPGAVIT----SYCYGRLDEHAP-FFLPLFNLVLATFPRSCCCQETSADETAAVLIELVQGEGGYVVPPQGFVRSVRDFCNKHGILMIADEIQSGAGRTGEWWAVNHSDLVPDILVFAEGIGSGMPISGVASRSELTASQPPGSMDG 585
            SG+EAVE AIK+ARH TG+ NVIVF+G+ HGRT  TM LTTSK  YRAG+ P P G  I     +Y YG  +E    + L   + VL +        +T+  ETAA+LIE V GEGGYVVPP+ F+  +R+ C++HGIL+IADEIQSG GRTG W+AV H DL PDIL  A+G+GSG+PISGV SR EL     PGS  G
Sbjct:  109 SGAEAVEGAIKLARHATGRSNVIVFQGSFHGRTASTMALTTSKTVYRAGYQPLPSGVFIAPYPYAYRYGWSEEQTTQWCLDELDFVLMS--------QTAPQETAAILIEPVLGEGGYVVPPKAFLTGLRELCDRHGILLIADEIQSGFGRTGRWFAVEHFDLRPDILTVAKGLGSGLPISGVFSRLELMQKWVPGSHGG 300
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BLAST of mRNA_H-canaliculatus_F_contig1322.2650.1 vs. uniprot
Match: A0A484E2I7_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E2I7_BRELC)

HSP 1 Score: 204 bits (519), Expect = 5.660e-59
Identity = 106/202 (52.48%), Postives = 140/202 (69.31%), Query Frame = 1 
Query:    1 SGSEAVEAAIKIARHTTGKQNVIVFRGAHHGRTTGTMGLTTSKISYRAGFGPFPPGAVITSYCY---GRL---DEHAPFFLPLFNLVLATFPRSCCCQETSADETAAVLIELVQGEGGYVVPPQGFVRSVRDFCNKHGILMIADEIQSGAGRTGEWWAVN-HSDLVPDILVFAEGIGSGMPISGVASRSELTASQPPGSMDG 585
            SG+EAVE A+K+AR  TGKQ +IVF+G +HGRT GTM LTTSK  Y AGFGPF PG  +  Y Y   G +   ++HA + L    + L         Q+++  +TAA++IE V GEGGYVVPP+ F++ +R   + + IL+IADE+QSG GRTGE++A++ H D  PDI+ FA+GI  G PISG+ASR ELT +QPPGSM G
Sbjct:  100 SGAEAVENAVKLARQATGKQRIIVFQGGYHGRTMGTMSLTTSKTVYSAGFGPFMPGVTVVPYPYALHGPIYDEEKHAEWCLEQLQVALL--------QQSAPRDTAAIIIESVLGEGGYVVPPKTFMKGLRQIASDNNILLIADEVQSGVGRTGEYFAIDSHFDTQPDIMTFAKGIADGYPISGIASRKELTDTQPPGSMGG 293
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1322.2650.1 vs. uniprot
Match: A0A7C2TEA8_9CHLR (Aminotransferase class III-fold pyridoxal phosphate-dependent enzyme n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A7C2TEA8_9CHLR)

HSP 1 Score: 204 bits (519), Expect = 6.250e-59
Identity = 108/200 (54.00%), Postives = 136/200 (68.00%), Query Frame = 1 
Query:    1 SGSEAVEAAIKIARHTTGKQNVIVFRGAHHGRTTGTMGLTTSKISYRAGFGPFPPGAVIT----SYCYGRLDEH-APFFLPLFNLVLATFPRSCCCQETSADETAAVLIELVQGEGGYVVPPQGFVRSVRDFCNKHGILMIADEIQSGAGRTGEWWAVNHSDLVPDILVFAEGIGSGMPISGVASRSELTASQPPGSMDG 585
            SG+EA+E A+K+AR  TG+ NVIVF+G+ HGRT GTM LTTSK  YRAG+ P  PG  +     SY YG  DE  + + L     +L T        +T+  ETAA+L+E V GEGGYVVPP  F+R +R+ C+KHGIL+I DEIQSG GRTG+W+A  H DLVPDI+V A+G+ SG+P+SGV SR EL     PGS  G
Sbjct:  103 SGAEAIEGALKLARSATGRPNVIVFQGSFHGRTVGTMSLTTSKTVYRAGYQPLMPGVFVAPFPYSYRYGWDDETTSQWCLEELEYLLVT--------QTAPSETAALLLETVIGEGGYVVPPASFMRGLREICDKHGILLILDEIQSGFGRTGKWFAFEHFDLVPDIMVVAKGLASGLPLSGVFSRMELMEKWTPGSHGG 294
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1322.2650.1 vs. uniprot
Match: A0A800DAD0_9CHLR (Aminotransferase class III-fold pyridoxal phosphate-dependent enzyme (Fragment) n=2 Tax=Chloroflexi TaxID=200795 RepID=A0A800DAD0_9CHLR)

HSP 1 Score: 204 bits (520), Expect = 8.950e-59
Identity = 103/195 (52.82%), Postives = 133/195 (68.21%), Query Frame = 1 
Query:    1 SGSEAVEAAIKIARHTTGKQNVIVFRGAHHGRTTGTMGLTTSKISYRAGFGPFPPGAVITSYCYGRLDEHAPFFLPLFNLVLATFPRSCCCQETSADETAAVLIELVQGEGGYVVPPQGFVRSVRDFCNKHGILMIADEIQSGAGRTGEWWAVNHSDLVPDILVFAEGIGSGMPISGVASRSELTASQPPGSMDG 585
            SG+EAVE A+K+ARH TG+ NVIVF+G+ HGRT  TM LTTSK  YRAG+ P P G  +  Y Y      +P     F L    F       +T+ +ETAA+L+E V GEGGYVVPP GF++ +R  C++HG+L+IADEIQSG GRTG W+AV+H D+ PDI+  A+GI SG+P+SG+A+R EL     PGS  G
Sbjct:  115 SGAEAVEGAVKLARHATGRPNVIVFQGSFHGRTALTMALTTSKTVYRAGYQPLPAGVFVAPYPYAYRFGWSPEETETFCLREVEFLLKT---QTAPEETAAILVEPVLGEGGYVVPPPGFLKGLRRICDEHGLLLIADEIQSGFGRTGRWFAVDHFDVTPDIMTMAKGIASGLPLSGIAARRELMERWRPGSHGG 306
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1322.2650.1 vs. uniprot
Match: UPI001A0FA6DF (Aminotransferase class III-fold pyridoxal phosphate-dependent enzyme n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=UPI001A0FA6DF)

HSP 1 Score: 202 bits (513), Expect = 9.320e-59
Identity = 106/200 (53.00%), Postives = 132/200 (66.00%), Query Frame = 1 
Query:    1 SGSEAVEAAIKIARHTTGKQNVIVFRGAHHGRTTGTMGLTTSKISYRAGFGPFPPGAVITS----YCYGRLDEHA-PFFLPLFNLVLATFPRSCCCQETSADETAAVLIELVQGEGGYVVPPQGFVRSVRDFCNKHGILMIADEIQSGAGRTGEWWAVNHSDLVPDILVFAEGIGSGMPISGVASRSELTASQPPGSMDG 585
            SG+EAVEA++K+AR  T + N+IVF+G  HGRT GTM LTTS   YRAG+GP  PG  +T     Y YG   E    F L   NL+L T        +T+  ETAAVL+E V GEGGYVVPP GF+++VR  C++H IL IADEIQSG GRTG W+A  H D +PDI+V A+G+ SG P+SG+A R  L  +  PGS  G
Sbjct:   39 SGAEAVEASVKLARQATNRPNIIVFQGGFHGRTVGTMSLTTSNTIYRAGYGPLMPGVFVTPFPYVYRYGWSPEDTVAFCLRELNLLLVT--------QTAPQETAAVLVEPVLGEGGYVVPPMGFLKAVRQICDEHDILFIADEIQSGFGRTGRWFAHQHDDFMPDIMVMAKGLASGFPLSGIAYRPPLMNNARPGSHGG 230
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1322.2650.1 vs. uniprot
Match: A0A497BGR9_9CHLR (Aspartate aminotransferase family protein n=3 Tax=Chloroflexi TaxID=200795 RepID=A0A497BGR9_9CHLR)

HSP 1 Score: 203 bits (517), Expect = 1.210e-58
Identity = 104/200 (52.00%), Postives = 134/200 (67.00%), Query Frame = 1 
Query:    1 SGSEAVEAAIKIARHTTGKQNVIVFRGAHHGRTTGTMGLTTSKISYRAGFGPFPPGAVITSYCYG-----RLDEHAPFFLPLFNLVLATFPRSCCCQETSADETAAVLIELVQGEGGYVVPPQGFVRSVRDFCNKHGILMIADEIQSGAGRTGEWWAVNHSDLVPDILVFAEGIGSGMPISGVASRSELTASQPPGSMDG 585
            SG+EAVE A+K+ARH TGK NVIVF+G+ HGRT  TM LTTSK  YR G+ P P G  +  Y Y      R +E   F L    L+L          +T+  ETAA+L+E V GEGGYVVPP GF+R +R  C++HG+L+IADE+QSG GRTG+W+AV H ++ PDI+  A+G+ SG+P+SGVA+R EL     PGS  G
Sbjct:  102 SGAEAVEGAVKLARHATGKPNVIVFQGSFHGRTALTMALTTSKTIYRVGYQPLPAGVFVAPYPYAYRYGWRPEETEEFCLHEVELLLK--------MQTAPSETAAILVEPVLGEGGYVVPPPGFLRGLRRICDEHGMLLIADEVQSGFGRTGKWFAVEHLNVTPDIMTMAKGLASGLPLSGVAARRELMEKWIPGSHGG 293
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1322.2650.1 vs. uniprot
Match: A0A162ZRM8_PHYB8 (Uncharacterized protein n=1 Tax=Phycomyces blakesleeanus (strain ATCC 8743b / DSM 1359 / FGSC 10004 / NBRC 33097 / NRRL 1555) TaxID=763407 RepID=A0A162ZRM8_PHYB8)

HSP 1 Score: 204 bits (518), Expect = 1.330e-58
Identity = 105/200 (52.50%), Postives = 133/200 (66.50%), Query Frame = 1 
Query:    1 SGSEAVEAAIKIARHTTGKQNVIVFRGAHHGRTTGTMGLTTSKISYRAGFGPFPPGAVITSYCY-----GRLDEHAPFFLPLFNLVLATFPRSCCCQETSADETAAVLIELVQGEGGYVVPPQGFVRSVRDFCNKHGILMIADEIQSGAGRTGEWWAVNHSDLVPDILVFAEGIGSGMPISGVASRSELTASQPPGSMDG 585
            SGSEAVEAAIK+AR  T KQN+IVF+G++HGRT GTM LTTSK +Y AGFGP  PG  +  Y Y         +   F                  Q TS ++TAA+LIE +QGEGGYVVPP+G+++ +R  C+KH IL+I DE+QSG GRTG+ +AV H+ +VPDILV A+GI SG P+SG+ +   L   QPPGSM G
Sbjct:  110 SGSEAVEAAIKLARQATKKQNIIVFQGSYHGRTFGTMALTTSKTTYSAGFGPLMPGVHVAPYPYFQQWAAHKADPTKFTPEWCGEEALRQLEILLKQRTSPEDTAAILIEPIQGEGGYVVPPKGYMKGLRALCDKHNILLICDEVQSGFGRTGKMFAVEHTGVVPDILVMAKGIASGYPLSGIVANKALMDLQPPGSMGG 309
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1322.2650.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1Y1Y9F9_9FUNG2.850e-6352.63Uncharacterized protein n=1 Tax=Basidiobolus meris... [more]
K3WGZ0_GLOUD1.390e-6053.47Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A836CIQ1_9STRA5.420e-6054.234-aminobutyrate aminotransferase n=1 Tax=Tribonema... [more]
A0A0S7BPQ3_9CHLR6.810e-6055.504-aminobutyrate aminotransferase n=1 Tax=Longiline... [more]
A0A484E2I7_BRELC5.660e-5952.48Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
A0A7C2TEA8_9CHLR6.250e-5954.00Aminotransferase class III-fold pyridoxal phosphat... [more]
A0A800DAD0_9CHLR8.950e-5952.82Aminotransferase class III-fold pyridoxal phosphat... [more]
UPI001A0FA6DF9.320e-5953.00Aminotransferase class III-fold pyridoxal phosphat... [more]
A0A497BGR9_9CHLR1.210e-5852.00Aspartate aminotransferase family protein n=3 Tax=... [more]
A0A162ZRM8_PHYB81.330e-5852.50Uncharacterized protein n=1 Tax=Phycomyces blakesl... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1322contigH-canaliculatus_F_contig1322:20419..23002 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score147.5
Seed ortholog evalue7.7e-33
Seed eggNOG ortholog36080.S2KE81
KEGG rclassRC00006,RC00062
KEGG koko:K00823
KEGG ReactionR00908,R01648
KEGG Pathwayko00250,ko00410,ko00640,ko00650,ko01100,ko01120,map00250,map00410,map00640,map00650,map01100,map01120
KEGG ModuleM00027
EggNOG free text desc.Aminotransferase class-III
EggNOG OGs1GWCT@112252,39JJC@33154,3NVGI@4751,COG4992@1,KOG1401@2759
EC2.6.1.19
COG Functional cat.E
Best tax levelFungi incertae sedis
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01007
Hectar predicted targeting categoryother localisation
Exons5
Model size988
Cds size699
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929061.144695-UTR-H-canaliculatus_F_contig1322:20418..205261622929061.144695-UTR-H-canaliculatus_F_contig1322:20418..20526Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1322 20419..20526 +
1696845664.8210578-UTR-H-canaliculatus_F_contig1322:20418..205261696845664.8210578-UTR-H-canaliculatus_F_contig1322:20418..20526Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1322 20419..20526 +
1622929061.256928-UTR-H-canaliculatus_F_contig1322:22821..230021622929061.256928-UTR-H-canaliculatus_F_contig1322:22821..23002Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1322 22822..23002 +
1696845664.9557624-UTR-H-canaliculatus_F_contig1322:22821..230021696845664.9557624-UTR-H-canaliculatus_F_contig1322:22821..23002Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1322 22822..23002 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929061.164968-CDS-H-canaliculatus_F_contig1322:20526..206321622929061.164968-CDS-H-canaliculatus_F_contig1322:20526..20632Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1322 20527..20632 +
1696845664.8343813-CDS-H-canaliculatus_F_contig1322:20526..206321696845664.8343813-CDS-H-canaliculatus_F_contig1322:20526..20632Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1322 20527..20632 +
1622929061.1866918-CDS-H-canaliculatus_F_contig1322:21351..215641622929061.1866918-CDS-H-canaliculatus_F_contig1322:21351..21564Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1322 21352..21564 +
1696845664.8436975-CDS-H-canaliculatus_F_contig1322:21351..215641696845664.8436975-CDS-H-canaliculatus_F_contig1322:21351..21564Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1322 21352..21564 +
1622929061.203734-CDS-H-canaliculatus_F_contig1322:21768..219051622929061.203734-CDS-H-canaliculatus_F_contig1322:21768..21905Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1322 21769..21905 +
1696845664.886813-CDS-H-canaliculatus_F_contig1322:21768..219051696845664.886813-CDS-H-canaliculatus_F_contig1322:21768..21905Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1322 21769..21905 +
1622929061.2215114-CDS-H-canaliculatus_F_contig1322:22335..225371622929061.2215114-CDS-H-canaliculatus_F_contig1322:22335..22537Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1322 22336..22537 +
1696845664.9329617-CDS-H-canaliculatus_F_contig1322:22335..225371696845664.9329617-CDS-H-canaliculatus_F_contig1322:22335..22537Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1322 22336..22537 +
1622929061.235014-CDS-H-canaliculatus_F_contig1322:22780..228211622929061.235014-CDS-H-canaliculatus_F_contig1322:22780..22821Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1322 22781..22821 +
1696845664.9461703-CDS-H-canaliculatus_F_contig1322:22780..228211696845664.9461703-CDS-H-canaliculatus_F_contig1322:22780..22821Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1322 22781..22821 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1322.2650.1prot_H-canaliculatus_F_contig1322.2650.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig1322 20527..22821 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig1322.2650.1

>prot_H-canaliculatus_F_contig1322.2650.1 ID=prot_H-canaliculatus_F_contig1322.2650.1|Name=mRNA_H-canaliculatus_F_contig1322.2650.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=233bp
MGLTTSKISYRAGFGPFPPGAVITSYCYGRLDEHAPFFLPLFNLVLATFP
RSCCCQETSADETAAVLIELVQGEGGYVVPPQGFVRSVRDFCNKHGILMI
ADEIQSGAGRTGEWWAVNHSDLVPDILVFAEGIGSGMPISGVASRSELTA
SQPPGSMDGRNVRGQCRVVRGCCCHDPSHARRERSHQRYSTRSPAHEWRR
PNQWGGDGGGGLLPLDLASRSAWAGPDGGSGV*
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mRNA from alignment at H-canaliculatus_F_contig1322:20419..23002+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig1322.2650.1 ID=mRNA_H-canaliculatus_F_contig1322.2650.1|Name=mRNA_H-canaliculatus_F_contig1322.2650.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=2584bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1322:20419..23002+ (Hapterophycus canaliculatus Oshoro5f female)
AGCGGGTCCGAGGCCGTCGAGGCCGCGATAAAGATAGCCCGGCATACCAC
CGGAAAGCAAAACGTCATCGTCTTTCGGGGCGCACACCACGGGCGCACTA
CGGGCACTATGGGGTTAACCACCAGCAAGATATCATACCGTGCCGGTTTC
GGCCCCTTTCCGCCGGGGGCAGTGATCACAAGCTACTGTTACGGGCGTCT
AGATGAGCACGCCCGTTAGCGTATTATTGGAGAGTGGGCATATGTCTATA
GTGTTGCGGTTTGCGTGGCCTCTGGCCGAATGCCGCCCCCACTCGGCTCA
GACCTGAGAACCCTGAGAACCCTGAGAACCCTGATAACCCTGAGAACGAA
CGACGACAACTGAGGACTCTGAACAAGAGATCGGACGACTCGCACTATTG
TCCTAAAGATAATAAGGCAAGGAGCACTAAGCGAACTCGGTCAGAGCACT
GATTTAGCTATCTGGAAGTACTACAGTACCCAGGTCTGATTATTAATTGA
TGGAGTGTGAAGTCATTCATTACTAGGGCTTTACCAGCTCGCAGTGGACG
AGGAACCACCGTTTCCTACATAAATAAATTATGACCTAAAGGGTGGTATG
AGTTAAACTCCGGGGCAAGGCTGCCCCTGGGTCTCAGCCCAATATTATAC
TCCGCTCTGTAATACTACCCTTACTGTGCTCAGTGCCTCGCGAAACCTGC
GGCGACGCTGTCTGGTGGCGCAGGAAGCGCTGGCGGGCAGGGGTGCTGCG
GAGGTCCACTAGCGGACCTGGAACAACTTTTGCATCAGGCAAGCGCTGTT
TCTGGTGGCTCTTGTTGCTGACTTGTGTGTGTCTGTTCTATGCACCGACG
GGCGCCGGTTTTCCAATATATATAGATGCACGCACCTACGGATTTTGCCG
ATGGGCCCTAATTCGCATTCCGCCCCCCCCCAGCATTCTTCTTGCCGCTC
TTCAATCTTGTCCTTGCTACGTTTCCTCGCTCTTGCTGTTGCCAGGAAAC
ATCAGCCGACGAAACCGCGGCGGTGCTGATCGAACTGGTCCAAGGGGAGG
GAGGATACGTGGTGCCACCGCAGGGGTTTGTGAGGAGTGTTCGTGATTTT
TGCAACAAGCACGGCATTCTCATGATTGCTGATGAGATCCAATCGGGTGA
GTGAAGGCAGCGCTGTGCAGATGCGCAGATACCACCCTTAACCTCTAGCT
ACCCGCTCCCGACTACGACAAGTCCGCGCAAAATATCTAACAACAATCCC
GCGGGCACTTTGTCCTCGCTACAAGATCAAGCATTTCTTCTGTATTTTGT
CAGAGACGTTGACTTTGTTAGGAATCGACCTTTGACGACCTGTTTACCAG
GAGCCGGAAGAACCGGAGAGTGGTGGGCAGTCAACCACAGCGACCTTGTC
CCTGACATTCTAGTGTTCGCCGAGGGCATCGGCAGTGGTATGCCTATCTC
CGGGGTAGCATCGCGATCGGAGCTCACCGCCAGCCAGGTTTGTGCGGCGC
CGACGCCGGTGCTACTTCTGTGGAAGCAGGAGCTATATGCCCTTTCAAGG
CAATACGAATGTAGTAACACATTTTTCGGATGGCCATGTCTGCTGGTTTG
TAGGTTCCGGCGGGGGCTGCCCGACGCACCCTCGTCAGGAGTTCCCGTTT
CCCAGTCGCAGCGGGTCGATTTCAAGCATGACTTGTTATTGTGCGTAATA
TTGCGCTGTTTCCTTTCAAAGCAATCGTCCGTCGAAAGCGAGCATCTAGT
TTCCTGAAATATCCAATTGCTGCTAAAGAAACATGCCGTCGAGTCTGCCT
CCCTTTTCACGAGGATTCTTCTGTCGCATCATTTCTCAATCTCCGCGCGT
GCGCTCCCTTACCCGCTCGCATTGTTACCCCTCCTCTTGTTCAACGCATC
TCTACAACCCATTGCAGCCTCCTGGTTCCATGGATGGGCGGAACGTACGT
GGCCAATGCCGTGTCGTGCGCGGCTGCTGTTGCCACGATCCAAGCCATGC
GCGACGAGAACGCTCTCACCAACGCTACTCTACGCGGTCGCCAGCTCATG
AATGGCGTCGTCCGAATCAGTGGGGGGGCGACGGGGGGGGGGGACTACTG
CCCTTGGATCTTGCTTCCCGTTCAAGGTGACCCACTTTTTATCTTCTGGG
TTGTATGTTCTTATACTGCGTGGCTTTGGTGTCGTTCCCGAGAAGACATA
TCTGTGTCCGAAAATCGTCGGCTTACCCACACAGCTATCCATGTCTCATC
GGGAACTTCGAGTAAACTGCGCTTGGATCCATTCGTTCCGGCTTTTACCG
TGTCATTCCTCGTAACCGTTAGACCTAACCAGCATTTTTAACCTGACCGC
CCCGGCTAAAAGGATCTGCGTGGGCTGGGCCTGATGGTGGGTCTGGAGTT
TGACGCGCCGCAAGGATCCGGGGTGGCCGGAGCCGTTACGCAGGCCTATT
TGAGGAGAGGCATGATTCTGCTGGTTTGCTCGTCGTACGAAACTGTTCGG
TTTATCCCGGCGCTCAACGTGAGCGAGGCGGAAAAAGACGAGGGCCTGGG
TATCTTCGAAGATGCAGTGAATGAGGTGCTTTCG
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1322:20419..23002+

>mRNA_H-canaliculatus_F_contig1322.2650.1 ID=mRNA_H-canaliculatus_F_contig1322.2650.1|Name=mRNA_H-canaliculatus_F_contig1322.2650.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1398bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1322:20419..23002+ (Hapterophycus canaliculatus Oshoro5f female)
ATGGGGTTAACCACCAGCAAGATATCATACCGTGCCGGTTTCGGCCCCTT
TCCGCCGGGGGCAGTGATCACAAGCTACTGTTACGGGCGTCTAGATGAGC
ACGCCCATGGGGTTAACCACCAGCAAGATATCATACCGTGCCGGTTTCGG
CCCCTTTCCGCCGGGGGCAGTGATCACAAGCTACTGTTACGGGCGTCTAG
ATGAGCACGCCCCATTCTTCTTGCCGCTCTTCAATCTTGTCCTTGCTACG
TTTCCTCGCTCTTGCTGTTGCCAGGAAACATCAGCCGACGAAACCGCGGC
GGTGCTGATCGAACTGGTCCAAGGGGAGGGAGGATACGTGGTGCCACCGC
AGGGGTTTGTGAGGAGTGTTCGTGATTTTTGCAACAAGCACGGCATTCTC
ATGATTGCTGATGAGATCCAATCGGCATTCTTCTTGCCGCTCTTCAATCT
TGTCCTTGCTACGTTTCCTCGCTCTTGCTGTTGCCAGGAAACATCAGCCG
ACGAAACCGCGGCGGTGCTGATCGAACTGGTCCAAGGGGAGGGAGGATAC
GTGGTGCCACCGCAGGGGTTTGTGAGGAGTGTTCGTGATTTTTGCAACAA
GCACGGCATTCTCATGATTGCTGATGAGATCCAATCGGGAGCCGGAAGAA
CCGGAGAGTGGTGGGCAGTCAACCACAGCGACCTTGTCCCTGACATTCTA
GTGTTCGCCGAGGGCATCGGCAGTGGTATGCCTATCTCCGGGGTAGCATC
GCGATCGGAGCTCACCGCCAGCCAGGAGCCGGAAGAACCGGAGAGTGGTG
GGCAGTCAACCACAGCGACCTTGTCCCTGACATTCTAGTGTTCGCCGAGG
GCATCGGCAGTGGTATGCCTATCTCCGGGGTAGCATCGCGATCGGAGCTC
ACCGCCAGCCAGCCTCCTGGTTCCATGGATGGGCGGAACGTACGTGGCCA
ATGCCGTGTCGTGCGCGGCTGCTGTTGCCACGATCCAAGCCATGCGCGAC
GAGAACGCTCTCACCAACGCTACTCTACGCGGTCGCCAGCTCATGAATGG
CGTCGTCCGAATCAGTGGGGGGGCGACGGGGGGGGGGGACTACTGCCCTT
GGATCTTGCTTCCCCCTCCTGGTTCCATGGATGGGCGGAACGTACGTGGC
CAATGCCGTGTCGTGCGCGGCTGCTGTTGCCACGATCCAAGCCATGCGCG
ACGAGAACGCTCTCACCAACGCTACTCTACGCGGTCGCCAGCTCATGAAT
GGCGTCGTCCGAATCAGTGGGGGGGCGACGGGGGGGGGGGACTACTGCCC
TTGGATCTTGCTTCCCGATCTGCGTGGGCTGGGCCTGATGGTGGGTCTGG
AGTTTGAGATCTGCGTGGGCTGGGCCTGATGGTGGGTCTGGAGTTTGA
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