mRNA_H-canaliculatus_F_contig13219.2647.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig13219.2647.1 vs. uniprot
Match: D7FYI2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYI2_ECTSI) HSP 1 Score: 324 bits (831), Expect = 4.120e-109 Identity = 170/189 (89.95%), Postives = 178/189 (94.18%), Query Frame = 1
Query: 1 QAIVTGRRPFFYSYDVATGKVVKIPRIFSSGRAEKHVETFAASPDGQWLAFIGSGGYVLLLSSKTKQWAADFKLNSTATAVTFSPDSRYLLASSADADVYKFDIRSRRCVLRFFNEGGTSTSSMATTGSASSSSQRMLTAVGSDSGVVNVYDADSLETGKRVFRPSPLKAVMSLTTPVTTTKFSPDGQV 567
QAIVTGRR FFYSYDV TGKV+KIPR+FSSGR EKH+ETFAASPDGQWLAFIGSGGYVLLLSSKTKQWAADFKLNSTATAVTFSPDSRY+LAS ADADVYKFDIRSRRCVLRFFNEGGT TSS+A+ G SSS QR LTAVGSDSGVVNVYDAD+LETGKRV RPSPLKAVMSLTTPVTTTKFSPDGQ+
Sbjct: 90 QAIVTGRRSFFYSYDVVTGKVLKIPRVFSSGRTEKHLETFAASPDGQWLAFIGSGGYVLLLSSKTKQWAADFKLNSTATAVTFSPDSRYVLASGADADVYKFDIRSRRCVLRFFNEGGTCTSSLASKGPTSSSPQR-LTAVGSDSGVVNVYDADALETGKRVLRPSPLKAVMSLTTPVTTTKFSPDGQM 277
BLAST of mRNA_H-canaliculatus_F_contig13219.2647.1 vs. uniprot
Match: A0A6H5KQH1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQH1_9PHAE) HSP 1 Score: 318 bits (815), Expect = 1.190e-103 Identity = 167/189 (88.36%), Postives = 176/189 (93.12%), Query Frame = 1
Query: 1 QAIVTGRRPFFYSYDVATGKVVKIPRIFSSGRAEKHVETFAASPDGQWLAFIGSGGYVLLLSSKTKQWAADFKLNSTATAVTFSPDSRYLLASSADADVYKFDIRSRRCVLRFFNEGGTSTSSMATTGSASSSSQRMLTAVGSDSGVVNVYDADSLETGKRVFRPSPLKAVMSLTTPVTTTKFSPDGQV 567
QAIVTGRR FFYSYDVATGKV+KIPR+FSSGR EKH+ETFAASPDGQWLAFIGSGGYVLLLSSKTKQWAADFKLNSTATAVTFSPDSRY+LAS ADADVYKFDIRSRRCVLRFFNEGGT TSS+A G SSS QR LTAVGSDSGVVNVY+ D+LETGKR+ RPSPLKAVMSLTTPVTTT FSPDGQ+
Sbjct: 322 QAIVTGRRSFFYSYDVATGKVLKIPRVFSSGRTEKHLETFAASPDGQWLAFIGSGGYVLLLSSKTKQWAADFKLNSTATAVTFSPDSRYVLASGADADVYKFDIRSRRCVLRFFNEGGTCTSSLAVKGPTSSSPQR-LTAVGSDSGVVNVYNDDALETGKRILRPSPLKAVMSLTTPVTTTLFSPDGQM 509
BLAST of mRNA_H-canaliculatus_F_contig13219.2647.1 vs. uniprot
Match: A0A835Z2C0_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2C0_9STRA) HSP 1 Score: 185 bits (470), Expect = 5.830e-54 Identity = 98/194 (50.52%), Postives = 132/194 (68.04%), Query Frame = 1
Query: 1 QAIVTGRRPFFYSYDVATGKVVKIPRIFSS-GRAEKHVETFAASPDGQWLAFIGSGGYVLLLSSKTKQWAADFKLNSTATAVTFSPDSRYLLASSADADVYKFDIRSRRCVLRFFNEGGTSTSSMATTGSASSSSQRMLTAVGSDSGVVNVYDADSLETGKR----VFRPSPLKAVMSLTTPVTTTKFSPDGQV 567
Q I++G +P FY YDV +G V ++P I ++ G+A+ + FA SP+G+W+AF S GY++L+S+KTKQWAADFKLN + A+ FSPDSRY+LAS DA+VYKFD+R RCV R +NEGGT T+ + S AVGS+SGVVN+YD+ + V+RP PL A+M+LTTP T KF+ D QV
Sbjct: 139 QVILSGDKPHFYYYDVQSGVVQRVPSIRNAAGKAQSTLAKFALSPNGEWIAFAASAGYIMLVSAKTKQWAADFKLNCSVEALVFSPDSRYILASGRDAEVYKFDVRHSRCVQRMYNEGGTGTTGL----DISPPQPHRYMAVGSESGVVNIYDSVAATAASAGSIGVYRPKPLHAIMNLTTPATIVKFNSDSQV 328
BLAST of mRNA_H-canaliculatus_F_contig13219.2647.1 vs. uniprot
Match: A0A7S1CWG3_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1CWG3_CYCTE) HSP 1 Score: 161 bits (408), Expect = 2.890e-45 Identity = 88/187 (47.06%), Postives = 125/187 (66.84%), Query Frame = 1
Query: 7 IVTGRRPFFYSYDVATGKVVKIPRIFSSGRAEKHVETFAASPDGQWLAFIGSGGYVLLLSSKTKQWAADFKLNSTATAVTFSPDSRYLLASSADADVYKFDIRSRRCVLRFFNEGGTSTSSMATTGSASSSSQRMLTAVGSDSGVVNVYDADSLETGKRVFRPSPLKAVMSLTTPVTTTKFSPDGQV 567
+V+GRRPFFY YD GK+ +PRI GR EK +E FAASPDG+ +AF+G+ GY++L+ +K+KQW AD K+N + AV F+PDS LL+S +D DVY++D+R+RRCV RF NE GT S++A + R AVG++SGVVN+Y + +PLK++M L T ++F+ DGQ+
Sbjct: 106 VVSGRRPFFYIYDSVAGKLDLVPRIM--GREEKSLERFAASPDGRTIAFVGNDGYIILVDAKSKQWMADLKMNGSVRAVAFTPDSECLLSSGSDGDVYRWDLRTRRCVERFSNEDGTIVSTLAVS--------RKHLAVGAESGVVNLYQE------RAASERNPLKSIMHLHTSNDFSRFNHDGQI 276
BLAST of mRNA_H-canaliculatus_F_contig13219.2647.1 vs. uniprot
Match: W7T4E2_9STRA (U3 small nucleolar rna-associated protein 18 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T4E2_9STRA) HSP 1 Score: 164 bits (416), Expect = 2.270e-44 Identity = 94/200 (47.00%), Postives = 132/200 (66.00%), Query Frame = 1
Query: 1 QAIVTGRRPFFYSYDVATGKVVKIPRIFSSGRAEKHVETFAASPDGQWLAFIGSGGYVLLLSSKTKQWAADFKLNSTATAVTFSPDSRYLLASSADADVYKFDIRSRRCVLRFFNEGGTSTSSMATTGSASSSSQRMLTAVGSDSGVVNVYDADSL-------ETGKRVFRPS----PLKAVMSLTTPVTTTKFSPDGQV 567
+ +V+GRRPFFY +D+ G ++PR+ GR EK +E F ASPDGQWLAF G GYV+L+ +++KQWA +FK+N TA A+ FS D R+L+AS DA VY++D+RSRRC+ RF NEGGT TS++A +S ML AVG++SGVVN+Y+ +++ E G + + P KA+ L T V T F+ DG +
Sbjct: 361 EVVVSGRRPFFYWHDLEAGASSRVPRLM--GREEKSLERFVASPDGQWLAFTGKDGYVVLVGARSKQWAGEFKMNGTARALAFSADGRHLMASGGDAVVYRWDLRSRRCLARFHNEGGTVTSALA-------ASAGML-AVGAESGVVNLYEEEAVLGGAAGPEHGPTSWHSTAALAPCKALTHLMTAVDTLAFNHDGML 550
BLAST of mRNA_H-canaliculatus_F_contig13219.2647.1 vs. uniprot
Match: A0A7S3QBK5_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QBK5_9STRA) HSP 1 Score: 162 bits (411), Expect = 1.150e-43 Identity = 85/187 (45.45%), Postives = 128/187 (68.45%), Query Frame = 1
Query: 7 IVTGRRPFFYSYDVATGKVVKIPRIFSSGRAEKHVETFAASPDGQWLAFIGSGGYVLLLSSKTKQWAADFKLNSTATAVTFSPDSRYLLASSADADVYKFDIRSRRCVLRFFNEGGTSTSSMATTGSASSSSQRMLTAVGSDSGVVNVYDADSLETGKRVFRPSPLKAVMSLTTPVTTTKFSPDGQV 567
+V+GRRPFFY YD+ +GK+ K+PRI GR EK +E F SPDG +AFIG+ GY++L+ +K+K W ADFK+N +A AV+FSP ++++S +D DVY++D+RS++CV +F N+ GT TS ++ T TAVG++SGVVN+Y + KR +P+K++M+L T + KF+P G +
Sbjct: 378 VVSGRRPFFYIYDMISGKIDKVPRI--QGRKEKSLEKFTTSPDGSLIAFIGNDGYIILVEAKSKMWVADFKMNGSARAVSFSPCGDFIISSGSDGDVYRWDLRSKKCVDKFQNQDGTITSFVSATS--------RFTAVGAESGVVNLYHDRAPAFKKR----TPVKSIMNLQTSIDHMKFNPTGDI 550
BLAST of mRNA_H-canaliculatus_F_contig13219.2647.1 vs. uniprot
Match: A0A7S2GVY7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GVY7_9STRA) HSP 1 Score: 158 bits (400), Expect = 9.110e-43 Identity = 90/189 (47.62%), Postives = 127/189 (67.20%), Query Frame = 1
Query: 1 QAIVTGRRPFFYSYDVATGKVVKIPRIFSSGRAEKHVETFAASPDGQWLAFIGSGGYVLLLSSKTKQWAADFKLNSTATAVTFSPDSRYLLASSADADVYKFDIRSRRCVLRFFNEGGTSTSSMATTGSASSSSQRMLTAVGSDSGVVNVYDADSLETGKRVFRPSPLKAVMSLTTPVTTTKFSPDGQV 567
+ IV+GRRPFFY YD G V K+ ++ +GR+++ +E ASPD + +AF + GYV+L ++TKQW+ +FK+N TA ++++SP SRYLLAS DA+VY +D+R RCV + NEGGT TS+MA T ++L AV S+SGVVN++D G P P +AVM+LTTPV T F+ DGQ+
Sbjct: 254 EVIVSGRRPFFYVYDAINGDVRKVGKL--AGRSDRSLEKAWASPDQKMVAFTANNGYVVLADARTKQWSQEFKINGTARSLSWSPCSRYLLASGGDAEVYTYDLRRSRCVSHWLNEGGTVTSAMACT-------DKVL-AVASESGVVNIFD--HAFPGPSSANPKPSRAVMNLTTPVETLTFNHDGQL 430
BLAST of mRNA_H-canaliculatus_F_contig13219.2647.1 vs. uniprot
Match: A0A7R9UCP6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UCP6_9STRA) HSP 1 Score: 149 bits (377), Expect = 2.770e-39 Identity = 90/203 (44.33%), Postives = 126/203 (62.07%), Query Frame = 1
Query: 1 QAIVTGRRPFFYSYDVATGKVVKIPRIFSSGRAEKHVETFAASPDGQWLAFIGSGGYVLLLSSKTKQWAADFKLNSTATAVTFSPDSRYLLASSADADVYKFDIRSRRCVLRFFNEGGTSTSSMATTG-----SASSSSQRMLTAVGSDSGVVNVYDADSLET-GKRV--------FRPSPLKAVMSLTTPVTTTKFSPDGQV 567
+A + RRPFFY DV +G+ ++P + GR +K +ETFAASPDG+ LAF+G+ GYVLL ++TK D K+N TA +VTFS DS LL S DADVY +D+RS+ C+ R+ NEGGT TS++ T + T VGS+SGVVNVYD ++ G+RV +PSP +++++L T + T + D QV
Sbjct: 276 KACLVSRRPFFYMLDVESGQAQRVPGLL--GRKDKSLETFAASPDGRMLAFVGNDGYVLLADTRTKALVWDVKMNGTARSVTFSADSTRLLTSGGDADVYTWDLRSQVCLHRYANEGGTVTSALLCTNRTEGWTPGEPGSNGFTLVGSESGVVNVYDTHRVDVVGQRVSTAAVPQLMQPSPHRSILNLRTTIDTVAATRDAQV 476
BLAST of mRNA_H-canaliculatus_F_contig13219.2647.1 vs. uniprot
Match: B5Y3P6_PHATC (Anthranilate synthase. anthranilate synthetase. chorismate lyase (Fragment) n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B5Y3P6_PHATC) HSP 1 Score: 147 bits (371), Expect = 5.590e-39 Identity = 82/193 (42.49%), Postives = 125/193 (64.77%), Query Frame = 1
Query: 7 IVTGRRPFFYSYDVATGKVVKIPRIFSSGRAEKHVETFAASPDGQWLAFIGSGGYVLLLSSKTKQWAADFKLNSTATAVTFSPDSRYLLASSADADVYKFDIRSRRCVLRFFNEGGTSTSSMATTGSASSSSQRMLTAVGSDSGVVNVYDADSLETGKR------VFRPSPLKAVMSLTTPVTTTKFSPDGQV 567
+V+GRR FFY YD GK+ IP+I GR E+ +E SPDG+ +AF+G+ GY++L + KQW AD K++ + A+TF+PD Y+LAS +D ++Y++D+R+RRCV RF N+ GT TS +A +S R L AVG++SGVVN++ S+ G R V +P+K++++L T +F+ DGQ+
Sbjct: 191 VVSGRRSFFYIYDTVAGKLELIPKIL--GREERSLEKCFPSPDGRTIAFVGNDGYIILFDAHAKQWIADLKISGSVRAITFTPDGEYILASGSDGEIYRWDLRTRRCVERFTNQDGTITSYLA-------ASSRHL-AVGAESGVVNMFSEHSM--GYRAVGHVVVSERNPMKSILNLHTSADMVRFNGDGQI 371
BLAST of mRNA_H-canaliculatus_F_contig13219.2647.1 vs. uniprot
Match: A0A6P8I2R9_ACTTE (U3 small nucleolar RNA-associated protein 18 homolog isoform X1 n=2 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8I2R9_ACTTE) HSP 1 Score: 147 bits (370), Expect = 2.160e-38 Identity = 81/189 (42.86%), Postives = 117/189 (61.90%), Query Frame = 1
Query: 1 QAIVTGRRPFFYSYDVATGKVVKIPRIFSSGRAEKHVETFAASPDGQWLAFIGSGGYVLLLSSKTKQWAADFKLNSTATAVTFSPDSRYLLASSADADVYKFDIRSRRCVLRFFNEGGTSTSSMATTGSASSSSQRMLTAVGSDSGVVNVYDADSLETGKRVFRPSPLKAVMSLTTPVTTTKFSPDGQV 567
Q I+T RR +FY YD+ GKV++IP I GR EK++E F SPDG L F+G GY++L+SS+TKQW + K+N T AVTFS D ++ ++ +D +VY +D+ +R C+ +F ++G +S+A +S A GSDSGVVNVYD K P PLK+V ++TTPV T F+ ++
Sbjct: 259 QVIMTSRRKYFYVYDMIKGKVIRIPHI--RGRCEKNLEKFQVSPDGSHLVFLGDNGYMMLVSSRTKQWIGNLKMNGTVGAVTFSADGSHMFSTGSDGEVYIWDMNTRTCLHKFTDDGCLMGTSLA------ASKDGQYLACGSDSGVVNVYDNKCFNQSK----PKPLKSVTNITTPVDGTLFNSSSEI 435 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig13219.2647.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig13219.2647.1 >prot_H-canaliculatus_F_contig13219.2647.1 ID=prot_H-canaliculatus_F_contig13219.2647.1|Name=mRNA_H-canaliculatus_F_contig13219.2647.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=189bp QAIVTGRRPFFYSYDVATGKVVKIPRIFSSGRAEKHVETFAASPDGQWLAback to top mRNA from alignment at H-canaliculatus_F_contig13219:123..2401+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig13219.2647.1 ID=mRNA_H-canaliculatus_F_contig13219.2647.1|Name=mRNA_H-canaliculatus_F_contig13219.2647.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=2279bp|location=Sequence derived from alignment at H-canaliculatus_F_contig13219:123..2401+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig13219:123..2401+ >mRNA_H-canaliculatus_F_contig13219.2647.1 ID=mRNA_H-canaliculatus_F_contig13219.2647.1|Name=mRNA_H-canaliculatus_F_contig13219.2647.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1134bp|location=Sequence derived from alignment at H-canaliculatus_F_contig13219:123..2401+ (Hapterophycus canaliculatus Oshoro5f female)back to top |